Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005186 Sechium edule HOM05D005041 ORTHO05D006003 5.5e-228 793.9 378 100.0
MELO3C031066.2 Cucumis melo HOM05D005041 ORTHO05D006003 9.3e-220 766.5 378 95.2
CsaV3_6G037940 Cucumis sativus L. HOM05D005041 ORTHO05D006003 1.2e-214 749.6 380 93.4
ClCG09G022250 Citrullus lanatus HOM05D005041 ORTHO05D006003 1.5e-201 706.1 388 87.9
Sed0006581 Sechium edule HOM05D005041 ORTHO05D006003 6.9e-199 697.2 340 96.2
Ciclev10015615m.g Citrus clementina HOM05D005041 ORTHO05D006003 2.1e-195 685.6 377 83.8
Dinv26517 Davidia involucrata HOM05D005041 ORTHO05D006003 3.6e-195 684.9 377 83.8
Thecc.01G157600 Theobroma cacao HOM05D005041 ORTHO05D006003 1.4e-194 682.9 379 83.6
GSVIVG01020787001 Vitis vinifera HOM05D005041 ORTHO05D006003 2.3e-194 682.2 379 83.4
Atru.chr6.3564 Acer truncatum HOM05D005041 ORTHO05D006003 1.1e-193 679.9 379 83.1
CSS0038733 Camellia sinensis var. sinensis HOM05D005041 ORTHO05D006003 1.1e-193 679.9 379 82.8
Actinidia11183 Actinidia chinensis HOM05D005041 ORTHO05D006003 7.4e-193 677.2 379 81.8
COL.COLO4_33676 Corchorus olitorius HOM05D005041 ORTHO05D006003 7.4e-193 677.2 379 82.8
Eucgr.K01189 Eucalyptus grandis HOM05D005041 ORTHO05D006003 1.7e-192 676.0 379 81.8
TWI63G0392 Tripterygium wilfordii HOM05D005041 ORTHO05D006003 1.1e-191 673.3 377 82.0
Hma1.2p1_0178F.1_g078240 Hydrangea macrophylla HOM05D005041 ORTHO05D006003 9.1e-191 670.2 377 82.5
Gorai.011G123100 Gossypium raimondii HOM05D005041 ORTHO05D006003 1.6e-190 669.5 379 81.0
Nn3g21016 Nelumbo nucifera HOM05D005041 ORTHO05D006003 2.0e-190 669.1 379 82.1
PGR142G0148 Punica granatum HOM05D005041 ORTHO05D006003 5.9e-190 667.5 376 80.3
Gohir.D10G111500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 7.7e-190 667.2 379 80.7
MD09G1156800 Malus domestica HOM05D005041 ORTHO05D006003 1.5e-188 662.9 387 79.3
Gohir.A10G154500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 2.5e-188 662.1 379 80.2
Manes.02G087100 Manihot esculenta HOM05D005041 ORTHO05D006003 9.4e-188 660.2 379 79.7
Lalb_Chr20g0114161 Lupinus albus HOM05D005041 ORTHO05D006003 8.8e-186 653.7 374 80.7
DCAR_013571 Daucus carota HOM05D005041 ORTHO05D006003 2.0e-182 642.5 379 78.1
Cc05_g09060 Coffea canephora HOM05D005041 ORTHO05D006003 6.5e-181 637.5 380 77.4
PSO541G3312 Papaver somniferum HOM05D005041 ORTHO05D006003 1.1e-180 636.7 377 77.7
Manes.01G129200 Manihot esculenta HOM05D005041 ORTHO05D006003 2.5e-180 635.6 378 78.3
PSO675G8631 Papaver somniferum HOM05D005041 ORTHO05D006003 7.2e-180 634.0 377 77.5
BcaB01g04071 Brassica carinata HOM05D005041 ORTHO05D006003 1.2e-179 633.3 373 77.2
A03p17270 Brassica napus HOM05D005041 ORTHO05D006003 2.1e-179 632.5 373 77.2
BraA03t11001Z Brassica rapa HOM05D005041 ORTHO05D006003 2.1e-179 632.5 373 77.2
C03p20380 Brassica napus HOM05D005041 ORTHO05D006003 2.7e-179 632.1 373 76.7
BolC3t14416H Brassica oleracea HOM05D005041 ORTHO05D006003 2.7e-179 632.1 373 76.7
Sp4g13380 Schrenkiella parvula HOM05D005041 ORTHO05D006003 4.7e-179 631.3 373 77.2
MSTRG.15060 Avicennia marina HOM05D005041 ORTHO05D006003 5.2e-178 627.9 377 76.7
Ah.01g004760 Amaranthus hybridus HOM05D005041 ORTHO05D006003 8.8e-178 627.1 379 76.0
TPR.G13543 Trifolium pratense HOM05D005041 ORTHO05D006003 1.3e-176 623.2 392 75.8
BcaB02g10347 Brassica carinata HOM05D005041 ORTHO05D006003 3.7e-176 621.7 369 77.2
BcaC02g11169 Brassica carinata HOM05D005041 ORTHO05D006003 8.3e-176 620.5 373 75.9
C04p19760 Brassica napus HOM05D005041 ORTHO05D006003 8.3e-176 620.5 373 75.9
BolC4t23509H Brassica oleracea HOM05D005041 ORTHO05D006003 8.3e-176 620.5 373 75.9
A05p14760 Brassica napus HOM05D005041 ORTHO05D006003 1.4e-175 619.8 373 76.1
Solyc05g006470.4 Solanum lycopersicum HOM05D005041 ORTHO05D006003 2.4e-175 619.0 380 76.3
EL10Ac9g21025 Beta vulgaris HOM05D005041 ORTHO05D006003 3.1e-175 618.6 383 74.9
Peaxi162Scf00828g00019 Petunia axillaris HOM05D005041 ORTHO05D006003 3.1e-175 618.6 379 76.0
Carub.0004s1211 Capsella rubella HOM05D005041 ORTHO05D006003 5.4e-175 617.8 371 77.9
MBI06_g08528_MAGBIO Magnolia biondii HOM05D005041 ORTHO05D006003 9.1e-175 617.1 379 76.5
CiPaw.04G135200 Carya illinoinensis HOM05D005041 ORTHO05D006003 5.9e-174 614.4 379 77.3
AL4G25850 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 7.7e-174 614.0 371 77.1
Os02g0817200 Oryza sativa ssp. japonica HOM05D005041 ORTHO05D006003 7.7e-174 614.0 375 73.6
Migut.D00514 Erythranthe guttata HOM05D005041 ORTHO05D006003 1.3e-173 613.2 382 74.6
ECA234G0116 Erigeron canadensis HOM05D005041 ORTHO05D006003 2.2e-173 612.5 380 73.2
AL283U10030 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 2.9e-173 612.1 371 76.8
AT2G30910 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 5.0e-173 611.3 370 77.0
Lsat_1_v5_gn_4_52360 Lactuca sativa HOM05D005041 ORTHO05D006003 5.0e-173 611.3 383 74.2
Zm00001eb258930 Zea mays HOM05D005041 ORTHO05D006003 6.5e-173 610.9 375 72.5
BraA05t20405Z Brassica rapa HOM05D005041 ORTHO05D006003 1.5e-172 609.8 375 75.2
SGA_v2.0_scaffold1G00710 Striga asiatica HOM05D005041 ORTHO05D006003 1.9e-172 609.4 378 74.6
Aqoxy1G01950 Aquilegia oxysepala HOM05D005041 ORTHO05D006003 3.2e-172 608.6 375 76.5
HanXRQChr16g0518211 Helianthus annuus HOM05D005041 ORTHO05D006003 5.5e-172 607.8 381 74.8
vmacro12428 Vaccinium macrocarpon HOM05D005041 ORTHO05D006003 5.5e-172 607.8 384 75.5
Cfa022568 Carpinus fangiana HOM05D005041 ORTHO05D006003 7.2e-172 607.4 380 77.1
FAN14G1924 Fragaria x ananassa HOM05D000054 ORTHO05D006003 2.7e-171 605.5 356 80.1
Nitab4.5_0004310g0020 Nicotiana tabacum HOM05D005041 ORTHO05D006003 1.0e-170 603.6 418 69.4
CDE10G0970 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 2.3e-170 602.4 369 76.2
SGA_v2.0_scaffold8G04656 Striga asiatica HOM05D005041 ORTHO05D006003 8.8e-170 600.5 378 73.0
Haze_13460 Corylus avellana HOM05D005041 ORTHO05D006003 1.7e-168 596.3 388 75.0
TAR626G0242 Trochodendron aralioides HOM05D005041 ORTHO05D006003 6.3e-168 594.3 379 73.6
Aa31LG5G6010 Aethionema arabicum HOM05D005041 ORTHO05D006003 4.1e-167 591.7 412 68.7
Glyma.10G216300 Glycine max HOM05D005041 ORTHO05D006003 7.0e-167 590.9 335 80.9
Dinv06276 Davidia involucrata HOM05D005041 ORTHO05D006003 9.2e-167 590.5 327 84.7
AT2G31300 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 7.7e-166 587.4 360 76.7
FAN02G2360 Fragaria x ananassa HOM05D000054 ORTHO05D006003 7.7e-166 587.4 383 73.9
QL08p043305 Quercus lobata HOM05D005041 ORTHO05D006003 7.3e-164 580.9 378 73.8
VMungo0540G2345 Vigna mungo HOM05D005041 ORTHO05D006003 9.5e-164 580.5 335 79.7
Prupe.3G170000 Prunus persica HOM05D005041 ORTHO05D006003 1.0e-162 577.0 379 72.0
unitig_37.g12857 Utricularia gibba HOM05D005041 ORTHO05D006003 4.0e-162 575.1 368 72.0
CANSAT11G1484 Cannabis sativa HOM05D005041 ORTHO05D006003 1.2e-161 573.5 379 71.5
CDE10G1309 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 4.4e-161 571.6 368 72.3
MD17G1143300 Malus domestica HOM05D005041 ORTHO05D006003 1.8e-159 566.2 379 71.0
A04p23600 Brassica napus HOM05D005041 ORTHO05D006003 2.4e-159 565.8 379 71.2
RcHm_v2.0_Chr2g0150441 Rosa chinensis HOM05D005041 ORTHO05D006003 2.0e-158 562.8 379 70.4
FAN09G1464 Fragaria x ananassa HOM05D000054 ORTHO05D006003 3.0e-157 558.9 375 70.7
C04p60050 Brassica napus HOM05D005041 ORTHO05D006003 3.9e-157 558.5 359 73.3
HPP92_025809 Vanilla planifolia HOM05D005041 ORTHO05D006003 1.9e-156 556.2 368 70.4
Potri.014G141700 Populus trichocarpa HOM05D005041 ORTHO05D006003 2.5e-156 555.8 379 69.9
THA.LOC104826236 Tarenaya hassleriana HOM05D005041 ORTHO05D006003 1.6e-155 553.1 369 69.1
BolC4t27508H Brassica oleracea HOM05D005041 ORTHO05D006003 1.4e-154 550.1 369 71.0
Lj6g0019726 Lotus japonicus HOM05D005041 ORTHO05D006003 8.9e-154 547.4 374 69.3
Medtr3g049070 Medicago truncatula HOM05D005041 ORTHO05D006003 1.5e-153 546.6 374 68.2
BcaB06g28392 Brassica carinata HOM05D005041 ORTHO05D006003 2.0e-153 546.2 334 75.4
Glyma.18G103800 Glycine max HOM05D005041 ORTHO05D006003 2.0e-153 546.2 374 69.0
Ca_14633_v3 Cicer arietinum L. HOM05D005041 ORTHO05D006003 3.4e-153 545.4 374 68.7
Thhalv10017625m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 4.4e-153 545.0 321 77.9
Glyma.08G311700 Glycine max HOM05D005041 ORTHO05D006003 3.7e-152 542.0 374 68.2
Psat5g186840 Pisum sativum HOM05D005041 ORTHO05D006003 1.1e-151 540.4 374 68.4
BraA04t17886Z Brassica rapa HOM05D005041 ORTHO05D006003 6.0e-150 534.6 366 70.2
Phvul.005G127400 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 2.3e-149 532.7 374 67.4
VMungo1080G0034 Vigna mungo HOM05D005041 ORTHO05D006003 8.6e-149 530.8 374 66.8
Lju124A34T49 Lonicera japonica HOM05D005041 ORTHO05D006003 1.1e-148 530.4 281 84.7
Lj2A374G38 Lonicera japonica HOM05D005041 ORTHO05D006003 2.5e-148 529.3 356 72.2
Hund00824 Selenicereus undatus HOM05D005041 ORTHO05D006003 2.5e-148 529.3 377 65.5
arahy.Tifrunner.gnm1.ann1.5LHA9P Arachis hypogaea HOM05D005041 ORTHO05D006003 5.8e-145 518.1 378 65.9
arahy.Tifrunner.gnm1.ann1.RC242R Arachis hypogaea HOM05D005041 ORTHO05D006003 5.8e-145 518.1 378 65.9
Nitab4.5_0002312g0010 Nicotiana tabacum HOM05D005041 ORTHO05D006003 5.4e-143 511.5 379 65.2
SMO364G0091 Selaginella moellendorffii HOM05D005041 ORTHO05D006003 3.3e-140 502.3 377 61.5
Duzib187G1062 Durio zibethinus HOM05D005041 ORTHO05D006003 6.2e-139 498.0 379 65.4
Sc12g0003800 Simmondsia chinensis HOM05D005041 ORTHO05D006003 1.1e-138 497.3 378 61.6
Cpa.g.sc50.61 Carica papaya HOM05D005041 ORTHO05D006003 1.5e-137 493.4 253 87.4
Phvul.006G036500 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 6.4e-136 488.0 374 62.6
Sopen05g002420 Solanum pennellii HOM05D005041 ORTHO05D006003 2.9e-128 462.6 257 81.3
AagrBONN_evm.TU.Sc2ySwM_228.2899 Anthoceros agrestis HOM05D005041 ORTHO05D006003 3.8e-128 462.2 363 59.8
Mapoly0116s0052 Marchantia polymorpha HOM05D005041 ORTHO05D006003 4.2e-127 458.8 386 54.4
Pp3c19_12930 Physcomitrium patens HOM05D005041 ORTHO05D006003 9.6e-124 447.6 374 57.2
Zm00001eb191400 Zea mays HOM05D005041 ORTHO05D006003 1.3e-123 447.2 253 77.1
FvH4_6g37551 Fragaria vesca HOM05D005041 ORTHO05D006003 8.1e-123 444.5 281 73.3
Pp3c18_4810 Physcomitrium patens HOM05D005041 ORTHO05D006003 1.1e-122 444.1 380 55.5
Mapoly0090s0056 Marchantia polymorpha HOM05D005041 ORTHO05D006003 2.4e-122 443.0 386 52.8
ATR0787G051 Amborella trichopoda HOM05D005041 ORTHO05D006003 1.3e-107 394.0 224 80.8
Thhalv10017010m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 6.2e-107 391.7 377 53.6
AUR62031794 Chenopodium quinoa HOM05D005041 ORTHO05D006003 3.4e-105 386.0 306 62.1
AUR62024003 Chenopodium quinoa HOM05D005041 ORTHO05D006003 7.9e-94 348.2 309 55.3
CBR_g18699 Chara braunii HOM05D005041 ORTHO05D006003 3.6e-86 322.8 536 35.8
Nn6g34435 Nelumbo nucifera HOM05D005041 ORTHO05D006003 1.0e-80 304.7 219 66.7
SalBow4G0308 Salvia bowleyana HOM05D005041 ORTHO05D006003 1.8e-77 293.9 212 67.5
Sabra14G0106900 Salix brachista HOM05D005041 ORTHO05D006003 3.9e-77 292.7 218 69.7
CARHR124910 Cardamine hirsuta HOM05D005041 ORTHO05D006003 1.0e-72 278.1 146 85.6
CARHR124390 Cardamine hirsuta HOM05D005041 ORTHO05D006003 7.2e-71 271.9 143 85.3
Sopen05g002410 Solanum pennellii HOM05D005041 ORTHO05D006003 1.4e-69 267.7 271 51.7
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 5.3e-66 255.8 365 37.3
Actinidia12824 Actinidia chinensis HOM05D005041 ORTHO05D006003 1.0e-64 251.5 153 77.1
Oeu032123.1 Olea europaea HOM05D005041 ORTHO05D006003 2.7e-57 226.9 146 71.9
SHI23137 Sapria himalayana HOM05D005041 ORTHO05D006003 4.5e-57 226.1 134 75.4
SEGI_31471 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 5.0e-48 196.1 139 67.6
TAR383G0169 Trochodendron aralioides HOM05D005041 ORTHO05D006003 2.6e-44 183.7 111 72.1
Cre16.g648100 Chlamydomonas reinhardtii HOM05D005041 ORTHO05D006003 3.9e-40 169.9 287 33.4
SEGI_36522 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 8.3e-35 152.1 92 70.7
Haze_27289 Corylus avellana HOM05D005041 ORTHO05D006003 8.6e-32 142.1 352 28.7
Duzib147G0812 Durio zibethinus HOM05D005041 ORTHO05D006003 2.2e-27 127.5 146 50.0
BolC2t10705H Brassica oleracea HOM05D005041 ORTHO05D006003 9.5e-23 112.1 57 82.5
Duzib147G0224 Durio zibethinus HOM05D005041 ORTHO05D006003 1.8e-21 107.8 57 86.0
SEGI_23574 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 7.6e-20 102.4 65 69.2
CARHR285180 Cardamine hirsuta HOM05D005041 ORTHO05D006003 4.6e-17 93.2 52 75.0
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 4.3e-15 86.7 93 47.3
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 4.0e-13 80.1 48 77.1
CARHR059870 Cardamine hirsuta HOM05D005041 ORTHO05D006003 5.2e-13 79.7 57 66.7
Glyma.02G162651 Glycine max HOM05D005041 ORTHO05D006003 6.6e-08 62.8 37 78.4


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