Gene: Solyc05g006470.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g006470.4
  • Transcript Identifier Solyc05g006470.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 1149537-1159695 : positive

Gene Family Information

  • ID HOM05D005041
  • #Genes/#Species 148/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g006470.4.1
  • uniprot A0A3Q7GDR2
  • gene_id Solyc05g006470

Descriptions

  • Description Actin-related protein 2/3 complex subunit (AHRD V3.3 *** A0A2I4F971_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030833
IEA
GOA Databaseregulation of actin filament polymerization
GO:0030833
IEA
InterProregulation of actin filament polymerization
GO:0034314
IBA
IEA
GOA DatabaseArp2/3 complex-mediated actin nucleation
GO:0034314
IEA
InterProArp2/3 complex-mediated actin nucleation
GO:0007015
ISO
PLAZA Integrative Orthologyactin filament organization AT2G30910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003779
IEA
GOA Databaseactin binding
GO:0051015
IBA
GOA Databaseactin filament binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005885
IBA
IEA
GOA DatabaseArp2/3 protein complex
GO:0005885
IEA
InterProArp2/3 protein complex
GO:0015629
IEA
GOA Databaseactin cytoskeleton
GO:0015629
IEA
InterProactin cytoskeleton
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G30910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G30910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR017383 Actin-related protein 2/3 complex subunit 1
Mapman id Description
20.2.2.1.3 Cytoskeleton organisation.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.component ArpC1