Gene: AT2G31300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G31300
  • Transcript Identifier AT2G31300.2
  • Gene Type Coding gene
  • Location Chr2 : 13345977-13349787 : negative

Gene Family Information

  • ID HOM05D005041
  • #Genes/#Species 148/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G31300.2
  • symbol ARPC1B
  • Alias ARPC1,ACTIN-RELATED PROTEIN C1
  • uniprot Q9SJW6

Descriptions

  • Description actin-related protein C1B
  • Computational description actin-related protein C1B (ARPC1B); FUNCTIONS IN: actin binding, nucleotide binding; INVOLVED IN: actin filament organization; LOCATED IN: Arp2/3 protein complex, nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), Actin-related protein 2/3 complex, subunit 1 (InterPro:IPR017383), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: actin-related protein C1A (TAIR:AT2G30910.3); Has 4117 Blast hits to 2979 proteins in 306 species: Archae - 4; Bacteria - 869; Metazoa - 1495; Fungi - 819; Plants - 455; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034314
IEA
GOA DatabaseArp2/3 complex-mediated actin nucleation
GO:0034314
IBA
Gene OntologyArp2/3 complex-mediated actin nucleation1
GO:0034314
IEA
InterProArp2/3 complex-mediated actin nucleation
GO:0030833
IEA
GOA Databaseregulation of actin filament polymerization
GO:0030833
IEA
InterProregulation of actin filament polymerization
GO:0007015
TAS
Gene Ontologyactin filament organization2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003779
IEA
GOA Databaseactin binding
GO:0005515
IEA
InterProprotein binding
GO:0051015
IBA
Gene Ontologyactin filament binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015629
IEA
GOA Databaseactin cytoskeleton
GO:0015629
IEA
InterProactin cytoskeleton
GO:0005885
IEA
GOA DatabaseArp2/3 protein complex
GO:0005885
IBA
TAS
Gene OntologyArp2/3 protein complex1 3
GO:0005885
IEA
InterProArp2/3 protein complex
GO:0005737
IDA
IEA
GOA Databasecytoplasm
GO:0005737
HDA
ISM
Gene Ontologycytoplasm4
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus4
GO:0005856
IEA
GOA Databasecytoskeleton

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR017383 Actin-related protein 2/3 complex subunit 1
IPR001680 WD40 repeat
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
20.2.2.1.3 Cytoskeleton organisation.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.component ArpC1