Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 5.4e-69 264.2 137 100.0
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 2.0e-63 245.7 135 93.3
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 3.4e-63 245.0 144 89.6
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 7.6e-63 243.8 135 92.6
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 1.6e-52 209.5 135 79.3
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 6.0e-52 207.6 135 78.5
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 7.9e-52 207.2 135 77.8
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 2.5e-50 202.2 129 79.8
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 3.3e-50 201.8 135 76.3
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 3.3e-50 201.8 135 76.3
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 7.4e-50 200.7 124 82.3
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 9.7e-50 200.3 129 79.1
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.6e-49 199.5 135 74.8
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 2.2e-49 199.1 124 78.2
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 6.3e-49 197.6 124 77.4
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 6.3e-49 197.6 137 74.5
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.4e-48 196.4 124 76.6
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 2.4e-48 195.7 124 79.0
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 3.1e-48 195.3 124 77.4
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 3.1e-48 195.3 125 77.6
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 5.3e-48 194.5 131 74.8
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 6.9e-48 194.1 118 81.4
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 9.0e-48 193.7 125 76.8
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 1.2e-47 193.4 124 76.6
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 1.5e-47 193.0 124 78.2
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 3.4e-47 191.8 122 80.3
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 3.4e-47 191.8 124 79.0
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 4.5e-47 191.4 124 77.4
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 4.5e-47 191.4 118 81.4
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 7.7e-47 190.7 125 76.8
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 1.3e-46 189.9 133 73.7
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.3e-46 189.9 135 70.4
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 1.3e-46 189.9 124 75.0
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 1.3e-46 189.9 124 75.0
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 2.2e-46 189.1 118 81.4
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.2e-46 189.1 118 81.4
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.8e-46 188.3 125 76.0
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 5.0e-46 188.0 123 74.8
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 8.5e-46 187.2 118 79.7
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 8.5e-46 187.2 124 75.0
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 2.5e-45 185.7 124 74.2
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 3.2e-45 185.3 124 72.6
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.2e-45 185.3 124 75.8
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 4.2e-45 184.9 125 75.2
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 4.2e-45 184.9 124 71.8
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 4.2e-45 184.9 127 70.9
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 5.5e-45 184.5 125 75.2
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 5.5e-45 184.5 124 73.4
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 7.2e-45 184.1 124 74.2
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 7.2e-45 184.1 124 75.8
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 1.2e-44 183.3 124 72.6
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 1.6e-44 183.0 124 78.2
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 2.1e-44 182.6 119 76.5
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 2.1e-44 182.6 124 72.6
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 2.7e-44 182.2 124 71.0
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 3.6e-44 181.8 126 73.0
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 6.1e-44 181.0 124 71.8
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 6.1e-44 181.0 124 71.8
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 7.9e-44 180.6 126 69.0
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 7.9e-44 180.6 124 71.0
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 1.4e-43 179.9 124 71.0
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 1.4e-43 179.9 124 71.0
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.4e-43 179.9 124 70.2
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 1.4e-43 179.9 124 70.2
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 1.4e-43 179.9 124 70.2
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 3.0e-43 178.7 124 70.2
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 3.9e-43 178.3 126 70.6
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 5.1e-43 177.9 124 71.0
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 8.8e-43 177.2 127 68.5
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 1.5e-42 176.4 110 80.0
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 1.5e-42 176.4 125 71.2
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 2.5e-42 175.6 124 69.4
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 5.7e-42 174.5 142 64.8
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 7.4e-42 174.1 124 68.5
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 9.7e-42 173.7 125 71.2
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 2.8e-41 172.2 128 71.9
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 3.7e-41 171.8 120 70.8
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 3.7e-41 171.8 124 66.9
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 3.7e-41 171.8 116 70.7
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 6.3e-41 171.0 119 68.9
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 6.3e-41 171.0 135 66.7
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 8.2e-41 170.6 124 70.2
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 1.4e-40 169.9 120 70.0
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 1.8e-40 169.5 131 65.6
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.4e-40 169.1 100 83.0
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 2.4e-40 169.1 120 66.7
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 1.2e-39 166.8 104 80.8
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 1.5e-39 166.4 120 65.8
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 1.5e-39 166.4 105 76.2
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.6e-39 165.6 124 67.7
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 2.6e-39 165.6 127 68.5
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 3.4e-39 165.2 120 65.8
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 4.5e-39 164.9 105 75.2
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 7.7e-39 164.1 122 64.8
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 2.9e-38 162.2 139 61.9
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 1.9e-37 159.5 121 65.3
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 3.2e-37 158.7 162 53.7
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 1.6e-36 156.4 125 64.0
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 2.7e-36 155.6 119 62.2
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 3.6e-36 155.2 121 64.5
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 3.6e-36 155.2 119 65.5
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 3.6e-36 155.2 124 67.7
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 4.7e-36 154.8 124 63.7
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 6.1e-36 154.5 119 63.0
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 1.0e-35 153.7 123 61.8
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 1.0e-35 153.7 117 65.8
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 3.0e-35 152.1 160 51.2
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 8.8e-35 150.6 119 63.0
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 1.1e-34 150.2 110 67.3
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 1.5e-34 149.8 121 63.6
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 1.5e-34 149.8 121 63.6
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 1.5e-34 149.8 121 63.6
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 2.0e-34 149.4 123 61.8
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 3.3e-34 148.7 135 63.0
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 4.4e-34 148.3 111 64.9
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 5.7e-34 147.9 154 54.5
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 7.4e-34 147.5 110 65.5
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 7.4e-34 147.5 110 65.5
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 7.4e-34 147.5 127 61.4
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 9.7e-34 147.1 135 62.2
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 9.7e-34 147.1 115 63.5
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 1.3e-33 146.7 117 62.4
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 3.7e-33 145.2 105 63.8
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 6.3e-33 144.4 87 81.6
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 1.8e-32 142.9 90 76.7
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 2.4e-32 142.5 112 58.0
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.1e-32 142.1 87 78.2
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 9.1e-32 140.6 104 60.6
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.5e-31 139.8 116 56.0
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 1.5e-31 139.8 92 73.9
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 4.5e-31 138.3 111 57.7
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 4.5e-31 138.3 90 74.4
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 5.9e-31 137.9 108 59.3
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 7.7e-31 137.5 124 60.5
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 2.2e-30 136.0 157 50.3
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 2.2e-30 136.0 120 54.2
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 2.9e-30 135.6 92 76.1
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 8.5e-30 134.0 90 71.1
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 7.2e-29 131.0 93 67.7
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 9.4e-29 130.6 101 58.4
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 4.7e-28 128.3 103 63.1
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 2.4e-24 115.9 77 74.0
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 7.7e-23 110.9 87 60.9
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 2.9e-22 109.0 69 81.2
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 5.0e-22 108.2 63 77.8
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 1.6e-20 103.2 81 64.2
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 2.7e-20 102.4 73 68.5
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 6.1e-20 101.3 77 61.0
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 8.0e-20 100.9 126 50.8
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 1.4e-19 100.1 116 43.1
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 3.0e-19 99.0 111 44.1
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 4.0e-19 98.6 89 50.6
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 7.0e-16 87.8 94 46.8
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 1.9e-13 79.7 117 39.3
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 2.5e-13 79.3 56 69.6
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 3.6e-12 75.5 100 40.0
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 6.1e-12 74.7 47 72.3
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 8.0e-12 74.3 52 67.3
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.0e-10 69.7 65 55.4


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