Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 9.5e-141 503.4 243 100.0
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 5.4e-120 434.5 243 82.3
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 3.5e-119 431.8 243 83.1
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 5.6e-117 424.5 243 82.7
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 7.3e-117 424.1 243 82.3
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 4.7e-116 421.4 243 81.9
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 6.2e-116 421.0 242 81.0
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 1.4e-115 419.9 243 80.7
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 1.8e-115 419.5 241 80.1
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 4.0e-115 418.3 243 80.2
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 2.2e-113 412.5 244 79.1
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 3.7e-113 411.8 242 79.8
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 4.9e-113 411.4 244 79.5
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 6.4e-113 411.0 244 79.9
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 1.4e-112 409.8 243 78.2
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 1.9e-112 409.5 243 77.4
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 3.2e-112 408.7 244 79.1
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 4.1e-112 408.3 243 77.8
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 5.4e-112 407.9 244 77.9
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 7.1e-112 407.5 244 78.3
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 7.1e-112 407.5 244 78.3
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 7.1e-112 407.5 244 78.7
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 1.2e-111 406.8 274 71.9
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 1.6e-111 406.4 244 77.5
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 2.7e-111 405.6 243 78.6
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.7e-111 405.6 243 77.4
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 4.6e-111 404.8 244 77.9
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.6e-111 404.8 243 77.4
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 6.0e-111 404.4 242 77.7
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 7.8e-111 404.1 241 77.6
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 1.0e-110 403.7 284 69.7
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 1.3e-110 403.3 243 77.0
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 1.7e-110 402.9 244 77.9
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 1.7e-110 402.9 244 77.5
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 3.0e-110 402.1 242 75.6
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 3.9e-110 401.7 243 77.8
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 5.1e-110 401.4 245 75.9
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 5.1e-110 401.4 243 77.4
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 1.1e-109 400.2 258 73.3
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 1.1e-109 400.2 242 77.3
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.9e-109 399.4 241 76.3
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 1.9e-109 399.4 241 75.9
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 4.3e-109 398.3 241 77.2
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 5.6e-109 397.9 295 65.1
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 1.2e-108 396.7 243 75.7
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 1.6e-108 396.4 245 75.1
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.8e-108 395.6 244 75.4
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 3.6e-108 395.2 243 74.9
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 3.6e-108 395.2 242 76.0
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 3.6e-108 395.2 244 75.4
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 4.7e-108 394.8 241 75.5
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 6.2e-108 394.4 253 75.1
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 6.2e-108 394.4 243 75.3
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 8.1e-108 394.0 242 75.2
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 8.1e-108 394.0 242 75.6
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 8.1e-108 394.0 244 75.0
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.1e-107 393.7 243 74.9
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 1.8e-107 392.9 241 76.8
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.8e-107 392.9 242 76.9
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 2.4e-107 392.5 241 74.3
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 2.4e-107 392.5 244 76.6
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 5.2e-107 391.3 230 78.7
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 6.8e-107 391.0 244 73.0
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 1.2e-106 390.2 243 77.4
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 2.0e-106 389.4 242 76.0
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 2.0e-106 389.4 241 73.9
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 2.6e-106 389.0 228 79.8
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 5.8e-106 387.9 275 68.4
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 7.6e-106 387.5 242 75.6
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 9.9e-106 387.1 244 73.0
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 1.3e-105 386.7 244 74.6
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.3e-105 386.7 241 73.4
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.7e-105 386.3 241 75.9
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 2.2e-105 386.0 244 74.2
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 2.2e-105 386.0 244 75.0
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 2.9e-105 385.6 244 74.6
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 3.8e-105 385.2 244 74.2
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 6.4e-105 384.4 229 78.6
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.9e-104 382.9 238 76.9
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 1.2e-103 380.2 243 70.8
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 4.6e-103 378.3 244 72.5
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.0e-102 377.1 243 71.2
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 1.3e-102 376.7 230 77.8
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 8.7e-102 374.0 243 72.4
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.1e-101 373.6 243 70.8
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 9.6e-101 370.5 243 69.1
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 2.1e-100 369.4 243 69.1
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 6.4e-97 357.8 327 56.9
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 2.4e-96 355.9 214 77.1
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 2.3e-94 349.4 244 70.5
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 2.3e-94 349.4 210 76.2
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 4.5e-90 335.1 204 77.5
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 7.6e-90 334.3 243 65.0
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 1.7e-89 333.2 205 76.6
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.9e-88 329.7 205 74.6
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.3e-86 322.8 243 64.6
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 9.6e-85 317.4 279 55.9
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 1.3e-84 317.0 252 59.1
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 9.0e-83 310.8 300 55.0
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.2e-82 310.5 243 63.0
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 2.0e-82 309.7 219 68.5
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 1.1e-77 293.9 250 54.4
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 1.1e-69 267.3 316 45.3
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.4e-64 250.4 251 52.6
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 1.4e-64 250.4 249 51.4
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 7.2e-64 248.1 259 49.0
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 3.2e-56 222.6 236 47.5
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 9.4e-56 221.1 340 42.1
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 4.4e-53 212.2 248 41.5
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.7e-52 209.1 147 68.7
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 7.0e-51 204.9 125 78.4
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 3.6e-47 192.6 107 78.5
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 1.0e-41 174.5 120 70.0
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 7.0e-35 151.8 83 75.9
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.2e-34 151.0 96 74.0
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 8.6e-25 118.2 85 68.2
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 8.6e-25 118.2 85 68.2
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 3.0e-22 109.8 59 79.7
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.2e-20 103.6 75 66.7
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 1.6e-18 97.4 64 70.3
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 1.5e-16 90.9 63 66.7
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 4.7e-15 85.9 132 41.7
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 8.9e-14 81.6 51 70.6
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 4.4e-13 79.3 51 68.6
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 4.4e-13 79.3 51 68.6
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 6.0e-10 68.9 43 69.8
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 1.7e-09 67.4 125 33.6
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 7.3e-08 62.0 38 68.4
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 9.5e-08 61.6 43 67.4
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 3.6e-07 59.7 77 41.6
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 6.2e-07 58.9 67 41.8
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 1.1e-06 58.2 94 38.3
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 1.8e-06 57.4 65 43.1
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 4.0e-06 56.2 76 43.4
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 5.2e-06 55.8 77 41.6
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 6.8e-06 55.5 68 39.7
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 8.9e-06 55.1 81 38.3
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 8.9e-06 55.1 72 43.1


User provided reference genes

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