Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0001240 Simmondsia chinensis HOM05D003321 ORTHO05D005161 1.8e-287 991.9 489 100.0
Hund02846 Selenicereus undatus HOM05D003321 ORTHO05D005161 8.6e-250 866.7 482 89.0
Hund09520 Selenicereus undatus HOM05D003321 ORTHO05D005161 9.8e-246 853.2 481 87.3
GSVIVG01011349001 Vitis vinifera HOM05D003321 ORTHO05D005161 4.1e-244 847.8 478 87.4
Gorai.007G078500 Gossypium raimondii HOM05D003321 ORTHO05D005161 7.0e-244 847.0 483 86.3
Gohir.A11G069100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 4.5e-243 844.3 483 86.1
Dinv33721 Davidia involucrata HOM05D003321 ORTHO05D005161 2.3e-242 842.0 476 87.8
Gohir.D11G073100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 3.9e-242 841.3 483 85.9
QL02p080714 Quercus lobata HOM05D003321 ORTHO05D005161 6.6e-242 840.5 480 86.9
Manes.15G172400 Manihot esculenta HOM05D003321 ORTHO05D005161 8.6e-242 840.1 482 84.4
Actinidia06077 Actinidia chinensis HOM05D003321 ORTHO05D005161 1.5e-241 839.3 483 85.5
Manes.15G176600 Manihot esculenta HOM05D003321 ORTHO05D005161 2.5e-241 838.6 482 84.9
Thecc.04G075500 Theobroma cacao HOM05D003321 ORTHO05D005161 2.5e-241 838.6 480 86.2
Atru.chr8.1903 Acer truncatum HOM05D003321 ORTHO05D005161 7.3e-241 837.0 484 85.7
Gohir.A09G021800 Gossypium hirsutum HOM05D003321 ORTHO05D005161 7.3e-241 837.0 480 85.6
MELO3C009890.2 Cucumis melo HOM05D003321 ORTHO05D005161 9.5e-241 836.6 480 86.0
Gohir.D09G021100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 9.5e-241 836.6 480 85.8
Haze_14579 Corylus avellana HOM05D003321 ORTHO05D005161 1.2e-240 836.3 481 85.4
CsaV3_3G041690 Cucumis sativus L. HOM05D003321 ORTHO05D005161 1.2e-240 836.3 480 86.0
Duzib264G0140 Durio zibethinus HOM05D003321 ORTHO05D005161 2.1e-240 835.5 478 85.1
Ah.11g050340 Amaranthus hybridus HOM05D003321 ORTHO05D005161 2.8e-240 835.1 480 85.6
CiPaw.04G019600 Carya illinoinensis HOM05D003321 ORTHO05D005161 2.8e-240 835.1 481 85.4
AUR62032308 Chenopodium quinoa HOM05D003321 ORTHO05D005161 3.6e-240 834.7 480 85.6
Actinidia23569 Actinidia chinensis HOM05D003321 ORTHO05D005161 4.7e-240 834.3 483 85.1
COL.COLO4_25165 Corchorus olitorius HOM05D003321 ORTHO05D005161 8.0e-240 833.6 478 85.4
PGR142G0788 Punica granatum HOM05D003321 ORTHO05D005161 2.3e-239 832.0 478 85.6
CiPaw.03G029600 Carya illinoinensis HOM05D003321 ORTHO05D005161 6.8e-239 830.5 480 85.4
Gorai.006G024900 Gossypium raimondii HOM05D003321 ORTHO05D005161 2.0e-238 828.9 506 82.0
Sed0022026 Sechium edule HOM05D003321 ORTHO05D005161 2.0e-238 828.9 483 84.9
CANSAT64G1196 Cannabis sativa HOM05D003321 ORTHO05D005161 7.5e-238 827.0 478 84.7
THA.LOC104805449 Tarenaya hassleriana HOM05D003321 ORTHO05D005161 9.8e-238 826.6 479 84.3
DCAR_011159 Daucus carota HOM05D003321 ORTHO05D005161 1.7e-237 825.9 478 85.4
Lj7A400T32 Lonicera japonica HOM05D003321 ORTHO05D005161 6.4e-237 823.9 478 84.5
TWI34G1126 Tripterygium wilfordii HOM05D003321 ORTHO05D005161 6.4e-237 823.9 483 82.6
Ciclev10011266m.g Citrus clementina HOM05D003321 ORTHO05D005161 1.4e-236 822.8 480 85.4
Eucgr.I01920 Eucalyptus grandis HOM05D003321 ORTHO05D005161 1.9e-236 822.4 483 83.9
arahy.Tifrunner.gnm1.ann1.QM6JB0 Arachis hypogaea HOM05D003321 ORTHO05D005161 2.4e-236 822.0 482 83.0
Prupe.3G271500 Prunus persica HOM05D003321 ORTHO05D005161 5.4e-236 820.8 481 84.0
Aa31LG2G4470 Aethionema arabicum HOM05D003321 ORTHO05D005161 9.2e-236 820.1 486 82.9
Glyma.03G031900 Glycine max HOM05D003321 ORTHO05D005161 2.7e-235 818.5 483 83.2
Lsat_1_v5_gn_4_46121 Lactuca sativa HOM05D003321 ORTHO05D005161 4.6e-235 817.8 481 83.8
VMungo0464G0737 Vigna mungo HOM05D003321 ORTHO05D005161 7.8e-235 817.0 483 82.6
ClCG10G014840 Citrullus lanatus HOM05D003321 ORTHO05D005161 1.7e-234 815.8 480 85.2
TWI60G1051 Tripterygium wilfordii HOM05D003321 ORTHO05D005161 1.7e-234 815.8 483 82.2
Glyma.01G136100 Glycine max HOM05D003321 ORTHO05D005161 2.3e-234 815.5 483 82.6
Phvul.004G026200 Phaseolus vulgaris HOM05D003321 ORTHO05D005161 1.5e-233 812.8 483 82.4
TAR622G1354 Trochodendron aralioides HOM05D003321 ORTHO05D005161 3.3e-233 811.6 483 84.1
EL10Ac5g10521 Beta vulgaris HOM05D003321 ORTHO05D005161 4.3e-233 811.2 480 84.0
HanXRQChr16g0519581 Helianthus annuus HOM05D003321 ORTHO05D005161 1.6e-232 809.3 481 82.3
Oeu037176.3 Olea europaea HOM05D003321 ORTHO05D005161 1.6e-232 809.3 505 80.6
Ca_13366_v3 Cicer arietinum L. HOM05D003321 ORTHO05D005161 1.8e-231 805.8 483 82.0
Lsat_1_v5_gn_2_88641 Lactuca sativa HOM05D003321 ORTHO05D005161 5.2e-231 804.3 478 82.8
TPR.G20170 Trifolium pratense HOM05D003321 ORTHO05D005161 6.8e-231 803.9 485 81.9
Ca_05956_v3 Cicer arietinum L. HOM05D003321 ORTHO05D005161 1.5e-230 802.7 483 81.4
HanXRQChr02g0056421 Helianthus annuus HOM05D003321 ORTHO05D005161 2.0e-230 802.4 477 83.2
MD17G1047600 Malus domestica HOM05D003321 ORTHO05D005161 2.0e-230 802.4 478 81.8
Potri.017G078500 Populus trichocarpa HOM05D003321 ORTHO05D005161 2.6e-230 802.0 483 82.8
Potri.004G124000 Populus trichocarpa HOM05D003321 ORTHO05D005161 9.8e-230 800.0 483 82.8
Sp2g17380 Schrenkiella parvula HOM05D003321 ORTHO05D005161 1.3e-229 799.7 481 82.1
CAN.G206.123 Capsicum annuum HOM05D003321 ORTHO05D005161 2.2e-229 798.9 476 83.2
Medtr5g082570 Medicago truncatula HOM05D003321 ORTHO05D005161 2.2e-229 798.9 483 81.4
ECA234G3709 Erigeron canadensis HOM05D003321 ORTHO05D005161 4.9e-229 797.7 483 81.0
Lju41A25T61 Lonicera japonica HOM05D003321 ORTHO05D005161 6.4e-229 797.3 460 85.4
MD09G1047500 Malus domestica HOM05D003321 ORTHO05D005161 8.3e-229 797.0 478 81.8
AUR62011989 Chenopodium quinoa HOM05D003321 ORTHO05D005161 1.9e-228 795.8 461 85.2
Medtr1g022345 Medicago truncatula HOM05D003321 ORTHO05D005161 1.9e-228 795.8 483 81.0
Peaxi162Scf00129g00539 Petunia axillaris HOM05D003321 ORTHO05D005161 4.1e-228 794.7 478 82.4
Nn4g23059 Nelumbo nucifera HOM05D003321 ORTHO05D005161 5.4e-228 794.3 465 84.1
PGSC0003DMG400001414 Solanum tuberosum HOM05D003321 ORTHO05D005161 5.4e-228 794.3 476 83.0
BraA06t26956Z Brassica rapa HOM05D003321 ORTHO05D005161 7.1e-228 793.9 484 81.4
RhsimUnG0055900 Rhododendron simsii HOM05D003321 ORTHO05D005161 7.1e-228 793.9 465 84.7
CSS0001778 Camellia sinensis var. sinensis HOM05D003321 ORTHO05D005161 9.2e-228 793.5 476 83.0
Solyc02g087710.3 Solanum lycopersicum HOM05D003321 ORTHO05D005161 9.2e-228 793.5 476 82.8
Sopen02g032440 Solanum pennellii HOM05D003321 ORTHO05D005161 9.2e-228 793.5 476 82.8
PGSC0003DMG400018099 Solanum tuberosum HOM05D003321 ORTHO05D005161 9.2e-228 793.5 476 82.8
SGA_v2.0_scaffold205G41764 Striga asiatica HOM05D003321 ORTHO05D005161 9.2e-228 793.5 484 81.4
A06p40380 Brassica napus HOM05D003321 ORTHO05D005161 1.6e-227 792.7 485 81.0
Phvul.011G212400 Phaseolus vulgaris HOM05D003321 ORTHO05D005161 2.1e-227 792.3 484 80.4
BcaC03g17525 Brassica carinata HOM05D003321 ORTHO05D005161 6.0e-227 790.8 481 81.3
A02p36020 Brassica napus HOM05D003321 ORTHO05D005161 6.0e-227 790.8 481 81.3
C02p54860 Brassica napus HOM05D003321 ORTHO05D005161 6.0e-227 790.8 481 81.3
BolC7t44284H Brassica oleracea HOM05D003321 ORTHO05D005161 6.0e-227 790.8 485 81.0
BcaC06g30900 Brassica carinata HOM05D003321 ORTHO05D005161 1.3e-226 789.6 479 81.6
C07p37670 Brassica napus HOM05D003321 ORTHO05D005161 1.3e-226 789.6 485 80.8
BraA02t08601Z Brassica rapa HOM05D003321 ORTHO05D005161 1.3e-226 789.6 481 81.1
Migut.H00892 Erythranthe guttata HOM05D003321 ORTHO05D005161 1.7e-226 789.3 483 81.2
MSTRG.3218 Avicennia marina HOM05D003321 ORTHO05D005161 2.3e-226 788.9 483 80.3
Nitab4.5_0003314g0110 Nicotiana tabacum HOM05D003321 ORTHO05D005161 2.3e-226 788.9 478 82.2
BolC2t11547H Brassica oleracea HOM05D003321 ORTHO05D005161 5.1e-226 787.7 481 81.1
BcaC06g33636 Brassica carinata HOM05D003321 ORTHO05D005161 6.6e-226 787.3 480 81.5
BcaB07g30122 Brassica carinata HOM05D003321 ORTHO05D005161 1.1e-225 786.6 481 80.7
Lj2g0002473 Lotus japonicus HOM05D003321 ORTHO05D005161 1.1e-225 786.6 480 80.0
Nitab4.5_0009739g0020 Nicotiana tabacum HOM05D003321 ORTHO05D005161 1.9e-225 785.8 492 80.3
RcHm_v2.0_Chr2g0169081 Rosa chinensis HOM05D003321 ORTHO05D005161 1.9e-225 785.8 479 80.6
Psat6g008440 Pisum sativum HOM05D003321 ORTHO05D005161 3.3e-225 785.0 502 77.7
CARHR151710 Cardamine hirsuta HOM05D003321 ORTHO05D005161 1.6e-224 782.7 479 81.2
AT3G28730 Arabidopsis thaliana HOM05D003321 ORTHO05D005161 2.1e-224 782.3 483 80.1
Carub.0005s0728 Capsella rubella HOM05D003321 ORTHO05D005161 2.8e-224 781.9 482 80.5
TPR.G38431 Trifolium pratense HOM05D003321 ORTHO05D005161 6.2e-224 780.8 481 80.5
Lalb_Chr02g0159551 Lupinus albus HOM05D003321 ORTHO05D005161 8.1e-224 780.4 476 79.4
arahy.Tifrunner.gnm1.ann1.T0AAPV Arachis hypogaea HOM05D003321 ORTHO05D005161 1.8e-223 779.2 483 79.5
FAN02G3930 Fragaria x ananassa HOM05D003321 ORTHO05D005161 8.9e-223 776.9 483 78.9
MBI17_g17503_MAGBIO Magnolia biondii HOM05D003321 ORTHO05D005161 2.6e-222 775.4 484 80.8
vmacro05729 Vaccinium macrocarpon HOM05D003321 ORTHO05D005161 4.4e-222 774.6 483 80.7
FvH4_6g49210 Fragaria vesca HOM05D003321 ORTHO05D005161 9.9e-222 773.5 482 78.6
PSO591G0346 Papaver somniferum HOM05D003321 ORTHO05D005161 9.9e-222 773.5 485 78.6
PSO832G3448 Papaver somniferum HOM05D003321 ORTHO05D005161 9.9e-222 773.5 485 78.6
FAN05G4145 Fragaria x ananassa HOM05D003321 ORTHO05D005161 1.3e-221 773.1 482 78.6
ATR1120G139 Amborella trichopoda HOM05D003321 ORTHO05D005161 4.9e-221 771.2 475 79.6
Thhalv10003803m.g Eutrema salsugineum HOM05D003321 ORTHO05D005161 8.3e-221 770.4 481 80.0
FAN09G2305 Fragaria x ananassa HOM05D003321 ORTHO05D005161 1.4e-220 769.6 482 78.2
Lj2g0024928 Lotus japonicus HOM05D003321 ORTHO05D005161 5.4e-220 767.7 480 79.8
FAN14G5472 Fragaria x ananassa HOM05D003321 ORTHO05D005161 2.1e-219 765.8 483 77.2
Migut.K01331 Erythranthe guttata HOM05D003321 ORTHO05D005161 2.7e-219 765.4 478 79.1
Psat2g033240 Pisum sativum HOM05D003321 ORTHO05D005161 2.7e-219 765.4 482 78.2
FAN09G2289 Fragaria x ananassa HOM05D003321 ORTHO05D005161 1.0e-218 763.5 483 77.0
VMungo1127G1679 Vigna mungo HOM05D003321 ORTHO05D005161 4.3e-217 758.1 468 79.3
AL5G18450 Arabidopsis lyrata HOM05D003321 ORTHO05D005161 9.6e-217 756.9 479 78.3
HPP92_017969 Vanilla planifolia HOM05D003321 ORTHO05D005161 3.1e-215 751.9 479 77.9
Os01g0184900 Oryza sativa ssp. japonica HOM05D003321 ORTHO05D005161 8.9e-215 750.4 484 76.2
Lalb_Chr06g0175461 Lupinus albus HOM05D003321 ORTHO05D005161 2.9e-213 745.3 454 79.5
FAN14G0823 Fragaria x ananassa HOM05D003321 ORTHO05D005161 3.8e-213 745.0 464 78.7
SalBow1G0468 Salvia bowleyana HOM05D003321 ORTHO05D005161 2.7e-211 738.8 470 78.3
Os05g0182600 Oryza sativa ssp. japonica HOM05D003321 ORTHO05D005161 3.9e-210 734.9 484 74.6
Aqoxy3G03281 Aquilegia oxysepala HOM05D003321 ORTHO05D005161 4.3e-209 731.5 482 75.1
SEGI_27754 Sequoiadendron giganteum HOM05D003321 ORTHO05D005161 4.9e-205 718.0 477 73.4
ECA238G2291 Erigeron canadensis HOM05D003321 ORTHO05D005161 4.2e-204 714.9 479 74.7
SEGI_13423 Sequoiadendron giganteum HOM05D003321 ORTHO05D005161 2.7e-203 712.2 477 73.8
CDE05G0865 Ceratophyllum demersum HOM05D003321 ORTHO05D005161 7.3e-201 704.1 482 73.9
Sabra17G0069700 Salix brachista HOM05D003321 ORTHO05D005161 1.1e-199 700.3 468 77.4
Zm00001eb282920 Zea mays HOM05D003321 ORTHO05D005161 4.0e-199 698.4 485 72.4
PSO384G3545 Papaver somniferum HOM05D003321 ORTHO05D005161 1.2e-190 670.2 483 69.4
Mapoly0030s0009 Marchantia polymorpha HOM05D003321 ORTHO05D005161 2.0e-190 669.5 476 68.1
Pp3c9_4400 Physcomitrium patens HOM05D003321 ORTHO05D005161 1.3e-189 666.8 492 66.9
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 1.6e-187 659.8 486 67.5
AagrBONN_evm.TU.Sc2ySwM_362.1279 Anthoceros agrestis HOM05D003321 ORTHO05D005161 6.3e-176 621.3 490 63.9
SMO356G0125 Selaginella moellendorffii HOM05D003321 ORTHO05D005161 2.0e-169 599.7 488 62.7
unitig_899.g15507 Utricularia gibba HOM05D003321 ORTHO05D005161 4.3e-169 598.6 366 81.4
Hma1.2p1_0247F.1_g101800 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 2.0e-166 589.7 364 83.2
Nitab4.5_0000564g0350 Nicotiana tabacum HOM05D003321 ORTHO05D005161 3.6e-163 578.9 456 68.4
Zm00001eb337810 Zea mays HOM05D003321 ORTHO05D005161 1.8e-159 566.6 369 77.5
Duzib147G1608 Durio zibethinus HOM05D003321 ORTHO05D005161 5.0e-157 558.5 476 62.0
SGA_v2.0_scaffold205G41773 Striga asiatica HOM05D003321 ORTHO05D005161 3.2e-156 555.8 370 74.3
Cc07_g03060 Coffea canephora HOM05D003321 ORTHO05D005161 1.0e-154 550.8 319 83.7
Rhsim05G0106500 Rhododendron simsii HOM05D003321 ORTHO05D005161 1.5e-140 503.8 485 58.8
Glyma.13G064800 Glycine max HOM05D003321 ORTHO05D005161 1.3e-112 411.0 254 81.1
Lj1g0009615 Lotus japonicus HOM05D003321 ORTHO05D005161 2.4e-111 406.8 340 64.7
Cre01.g029450 Chlamydomonas reinhardtii HOM05D003321 ORTHO05D005161 1.9e-108 397.1 482 46.7
PRCOL_00006095 Prasinoderma coloniale HOM05D003321 ORTHO05D005161 9.9e-97 358.2 453 41.9
CBR_g20179 Chara braunii HOM05D003321 ORTHO05D005161 3.8e-96 356.3 499 43.7
Thhalv10008631m.g Eutrema salsugineum HOM05D003321 ORTHO05D005161 4.8e-91 339.3 225 72.9
CSS0018217 Camellia sinensis var. sinensis HOM05D003321 ORTHO05D005161 8.1e-91 338.6 209 78.9
CSS0041948 Camellia sinensis var. sinensis HOM05D003321 ORTHO05D005161 8.1e-91 338.6 209 78.9
MCO12G387 Micromonas commoda HOM05D003321 ORTHO05D005161 1.1e-84 318.2 457 38.9
Cfa007905 Carpinus fangiana HOM05D003321 ORTHO05D005161 1.4e-82 311.2 183 84.7
Psat3g002600 Pisum sativum HOM05D003321 ORTHO05D004492 1.2e-81 308.1 242 66.9
CDE05G3094 Ceratophyllum demersum HOM05D003321 ORTHO05D005161 1.5e-81 307.8 236 69.1
Cc07_g03050 Coffea canephora HOM05D003321 ORTHO05D005161 9.6e-68 261.9 154 85.1
Oeu033336.1 Olea europaea HOM05D003321 ORTHO05D005161 4.8e-67 259.6 367 46.6
Aqoxy3G00239 Aquilegia oxysepala HOM05D003321 ORTHO05D019677 1.7e-64 251.1 292 49.0
Aqoxy3G03302 Aquilegia oxysepala HOM05D003321 ORTHO05D019677 1.3e-59 235.0 234 53.0
Cfa021690 Carpinus fangiana HOM05D003321 ORTHO05D005161 4.8e-59 233.0 500 29.4
HanXRQChr04g0102631 Helianthus annuus HOM05D003321 ORTHO05D019677 4.5e-49 199.9 125 76.8
Lsat_1_v5_gn_8_150800 Lactuca sativa HOM05D003321 ORTHO05D033839 7.2e-47 192.6 159 61.6
Hma1.2p1_0105F.1_g050590 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 3.7e-43 180.3 168 57.7
Sopen02g032430 Solanum pennellii HOM05D003321 ORTHO05D051122 9.1e-42 175.6 165 56.4
PGSC0003DMG400001413 Solanum tuberosum HOM05D003321 ORTHO05D394828 3.5e-41 173.7 285 42.5
HanXRQChr06g0173771 Helianthus annuus HOM05D003321 ORTHO05D019677 1.3e-40 171.8 106 75.5
BcaB01g02066 Brassica carinata HOM05D003321 ORTHO05D005161 9.4e-39 165.6 224 46.9
HanXRQChr01g0022931 Helianthus annuus HOM05D003321 ORTHO05D019677 3.6e-38 163.7 107 72.9
Lsat_1_v5_gn_5_101681 Lactuca sativa HOM05D003321 ORTHO05D000541 1.2e-33 148.7 113 66.4
unitig_899.g15508 Utricularia gibba HOM05D007118 ORTHO05D008957 7.7e-33 146.0 94 69.1
Solyc02g087680.1 Solanum lycopersicum HOM05D003321 ORTHO05D051122 2.2e-32 144.4 124 63.7
HanXRQChr15g0486151 Helianthus annuus HOM05D003321 ORTHO05D019677 2.5e-31 141.0 86 75.6
Lsat_1_v5_gn_6_49381 Lactuca sativa HOM05D003321 ORTHO05D033839 3.2e-31 140.6 83 78.3
TAR371G0510 Trochodendron aralioides HOM05D003321 ORTHO05D414592 3.2e-31 140.6 191 46.6
HanXRQChr11g0334501 Helianthus annuus HOM05D003321 ORTHO05D019677 7.2e-31 139.4 86 74.4
ECA236G4825 Erigeron canadensis HOM05D003321 ORTHO05D186893 2.2e-27 127.9 424 27.4
Hma1.2p1_0235F.1_g098910 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 2.7e-25 120.9 89 67.4
BolC2t11553H Brassica oleracea HOM05D003321 ORTHO05D033839 8.0e-22 109.4 89 61.8
Actinidia36023 Actinidia chinensis HOM05D003321 ORTHO05D013943 1.0e-21 109.0 63 76.2
HanXRQChr17g0550931 Helianthus annuus HOM05D003321 ORTHO05D224906 9.2e-18 95.9 75 62.7
ECA234G4637 Erigeron canadensis HOM05D003321 ORTHO05D008593 2.3e-16 91.3 117 45.3
MBI10_g19186_MAGBIO Magnolia biondii HOM05D000120 ORTHO05D000068 1.6e-06 58.5 137 38.0


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