Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0011200 Simmondsia chinensis HOM05D001447 ORTHO05D008204 1.8e-70 269.2 142 100.0
GSVIVG01031555001 Vitis vinifera HOM05D001447 ORTHO05D008204 2.4e-67 258.8 146 94.5
THA.LOC104826486 Tarenaya hassleriana HOM05D001447 ORTHO05D008204 3.1e-67 258.5 146 93.2
CSS0026907 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D008204 4.0e-67 258.1 146 93.2
Cpa.g.sc84.7 Carica papaya HOM05D001447 ORTHO05D008204 6.9e-67 257.3 144 94.4
Hund21994 Selenicereus undatus HOM05D001447 ORTHO05D008204 6.9e-67 257.3 145 93.1
Oeu043288.1 Olea europaea HOM05D001447 ORTHO05D008204 9.0e-67 256.9 145 91.7
Ah.06g194360 Amaranthus hybridus HOM05D001447 ORTHO05D008204 1.5e-66 256.1 145 93.8
arahy.Tifrunner.gnm1.ann1.FM4RDW Arachis hypogaea HOM05D001447 ORTHO05D008204 1.5e-66 256.1 146 92.5
arahy.Tifrunner.gnm1.ann1.PC9ITH Arachis hypogaea HOM05D001447 ORTHO05D008204 1.5e-66 256.1 146 92.5
Eucgr.J00729 Eucalyptus grandis HOM05D001447 ORTHO05D008204 1.5e-66 256.1 146 92.5
Rhsim13G0217100 Rhododendron simsii HOM05D001447 ORTHO05D008204 2.0e-66 255.8 146 92.5
CANSAT54G2932 Cannabis sativa HOM05D001447 ORTHO05D008204 3.4e-66 255.0 146 92.5
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 3.4e-66 255.0 145 92.4
Dinv36207 Davidia involucrata HOM05D001447 ORTHO05D008204 3.4e-66 255.0 145 92.4
Hma1.2p1_1043F.1_g251240 Hydrangea macrophylla HOM05D001447 ORTHO05D008204 3.4e-66 255.0 144 92.4
Potri.009G049400 Populus trichocarpa HOM05D001447 ORTHO05D008204 4.5e-66 254.6 145 92.4
Sed0024633 Sechium edule HOM05D001447 ORTHO05D008204 4.5e-66 254.6 147 91.8
TAR623G0906 Trochodendron aralioides HOM05D001447 ORTHO05D008204 4.5e-66 254.6 146 91.8
vmacro04117 Vaccinium macrocarpon HOM05D001447 ORTHO05D008204 4.5e-66 254.6 146 91.8
MELO3C014571.2 Cucumis melo HOM05D001447 ORTHO05D008204 5.8e-66 254.2 146 91.8
Ciclev10014361m.g Citrus clementina HOM05D001447 ORTHO05D008204 7.6e-66 253.8 145 91.7
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 7.6e-66 253.8 145 91.7
Nn2g15047 Nelumbo nucifera HOM05D001447 ORTHO05D008204 7.6e-66 253.8 145 91.7
TWI39G0518 Tripterygium wilfordii HOM05D001447 ORTHO05D008204 7.6e-66 253.8 145 92.4
Glyma.11G016000 Glycine max HOM05D001447 ORTHO05D008204 1.0e-65 253.4 146 91.1
Thecc.09G241300 Theobroma cacao HOM05D001447 ORTHO05D008204 1.0e-65 253.4 145 92.4
DCAR_002090 Daucus carota HOM05D001447 ORTHO05D008204 1.7e-65 252.7 146 91.1
FvH4_3g28280 Fragaria vesca HOM05D001447 ORTHO05D008204 1.7e-65 252.7 147 91.2
FAN11G0169 Fragaria x ananassa HOM05D001447 ORTHO05D008204 1.7e-65 252.7 147 91.2
FAN21G0684 Fragaria x ananassa HOM05D001312 ORTHO05D008204 1.7e-65 252.7 147 91.2
VMungo1215G0901 Vigna mungo HOM05D001447 ORTHO05D008204 1.7e-65 252.7 146 91.1
FAN16G0520 Fragaria x ananassa HOM05D001447 ORTHO05D008204 2.2e-65 252.3 148 90.5
Glyma.01G226700 Glycine max HOM05D001447 ORTHO05D008204 2.2e-65 252.3 146 91.1
Gohir.D08G021000 Gossypium hirsutum HOM05D001447 ORTHO05D008204 2.2e-65 252.3 145 91.7
Gorai.004G015600 Gossypium raimondii HOM05D001447 ORTHO05D008204 2.2e-65 252.3 145 91.7
HanXRQChr14g0453731 Helianthus annuus HOM05D001447 ORTHO05D008204 2.2e-65 252.3 144 91.7
BcaB07g34095 Brassica carinata HOM05D001447 ORTHO05D008204 2.9e-65 251.9 145 91.0
A06p05510 Brassica napus HOM05D001447 ORTHO05D008204 2.9e-65 251.9 145 91.0
C05p06620 Brassica napus HOM05D001447 ORTHO05D008204 2.9e-65 251.9 145 91.0
BolC5t29422H Brassica oleracea HOM05D001447 ORTHO05D008204 2.9e-65 251.9 145 91.0
BraA06t23759Z Brassica rapa HOM05D001447 ORTHO05D008204 2.9e-65 251.9 145 91.0
Cc01_g06000 Coffea canephora HOM05D001447 ORTHO05D008204 2.9e-65 251.9 145 90.3
LjContig00222g0003711 Lotus japonicus HOM05D001447 ORTHO05D008204 2.9e-65 251.9 146 90.4
Prupe.4G257100 Prunus persica HOM05D001447 ORTHO05D008204 2.9e-65 251.9 146 90.4
EL10Ac4g10183 Beta vulgaris HOM05D001447 ORTHO05D008204 3.8e-65 251.5 145 91.7
FAN25G0409 Fragaria x ananassa HOM05D001447 ORTHO05D008204 3.8e-65 251.5 147 90.5
SalBow6G0254 Salvia bowleyana HOM05D001447 ORTHO05D008204 3.8e-65 251.5 144 91.7
Lj1A305G18 Lonicera japonica HOM05D001447 ORTHO05D008204 4.9e-65 251.1 146 90.4
MD03G1170000 Malus domestica HOM05D001447 ORTHO05D008204 4.9e-65 251.1 146 89.7
COL.COLO4_36486 Corchorus olitorius HOM05D001312 ORTHO05D008204 6.5e-65 250.8 147 90.5
ECA238G0809 Erigeron canadensis HOM05D001447 ORTHO05D008204 6.5e-65 250.8 144 91.0
Nitab4.5_0000733g0210 Nicotiana tabacum HOM05D001447 ORTHO05D008204 8.4e-65 250.4 145 90.3
MSTRG.18450 Avicennia marina HOM05D001447 ORTHO05D008204 1.1e-64 250.0 144 91.7
Peaxi162Scf01713g00016 Petunia axillaris HOM05D001447 ORTHO05D008204 1.1e-64 250.0 145 90.3
Atru.chr3.2626 Acer truncatum HOM05D001447 ORTHO05D008204 1.4e-64 249.6 146 89.7
Gohir.A08G010700 Gossypium hirsutum HOM05D001447 ORTHO05D008204 1.4e-64 249.6 145 91.0
Lsat_1_v5_gn_2_111701 Lactuca sativa HOM05D001447 ORTHO05D008204 1.4e-64 249.6 144 90.3
Phvul.002G165600 Phaseolus vulgaris HOM05D001447 ORTHO05D008204 1.4e-64 249.6 144 90.3
PGR119G1003 Punica granatum HOM05D001447 ORTHO05D008204 1.4e-64 249.6 145 91.0
QL01p018045 Quercus lobata HOM05D001447 ORTHO05D008204 1.4e-64 249.6 145 90.3
RcHm_v2.0_Chr5g0051161 Rosa chinensis HOM05D001447 ORTHO05D008204 1.4e-64 249.6 147 89.1
CiPaw.13G153500 Carya illinoinensis HOM05D001447 ORTHO05D008204 1.9e-64 249.2 145 89.7
Nitab4.5_0001663g0090 Nicotiana tabacum HOM05D001447 ORTHO05D008204 2.5e-64 248.8 145 89.7
Aqoxy2G00279 Aquilegia oxysepala HOM05D001447 ORTHO05D008204 3.2e-64 248.4 146 90.4
Migut.N02358 Erythranthe guttata HOM05D001447 ORTHO05D008204 3.2e-64 248.4 146 88.4
ATR0721G176 Amborella trichopoda HOM05D001447 ORTHO05D008204 4.2e-64 248.1 146 88.4
AUR62000167 Chenopodium quinoa HOM05D001447 ORTHO05D008204 4.2e-64 248.1 145 89.0
AUR62039844 Chenopodium quinoa HOM05D001447 ORTHO05D008204 4.2e-64 248.1 146 88.4
Lalb_Chr09g0320581 Lupinus albus HOM05D001447 ORTHO05D008204 4.2e-64 248.1 146 89.0
Sp1g07180 Schrenkiella parvula HOM05D001447 ORTHO05D008204 4.2e-64 248.1 145 89.7
Medtr5g009070 Medicago truncatula HOM05D001447 ORTHO05D008204 5.5e-64 247.7 146 87.7
Thhalv10006894m.g Eutrema salsugineum HOM05D001447 ORTHO05D008204 7.1e-64 247.3 145 89.7
Carub.0001s0788 Capsella rubella HOM05D001447 ORTHO05D008204 9.3e-64 246.9 145 88.3
CAN.G676.47 Capsicum annuum HOM05D001447 ORTHO05D008204 9.3e-64 246.9 145 89.0
PSO339G2769 Papaver somniferum HOM05D001447 ORTHO05D008204 9.3e-64 246.9 146 87.7
PSO384G0341 Papaver somniferum HOM05D001447 ORTHO05D008204 9.3e-64 246.9 146 87.7
Solyc04g015490.4 Solanum lycopersicum HOM05D001447 ORTHO05D008204 9.3e-64 246.9 145 89.0
Sopen04g007560 Solanum pennellii HOM05D001447 ORTHO05D008204 9.3e-64 246.9 145 89.0
Zm00001eb212250 Zea mays HOM05D001447 ORTHO05D008204 9.3e-64 246.9 146 88.4
AT1G08520 Arabidopsis thaliana HOM05D001447 ORTHO05D008204 1.6e-63 246.1 145 88.3
Ca_24494_v3 Cicer arietinum L. HOM05D001447 ORTHO05D008204 1.6e-63 246.1 146 87.7
AL1G18950 Arabidopsis lyrata HOM05D001447 ORTHO05D008204 3.5e-63 245.0 145 87.6
TPR.G37864 Trifolium pratense HOM05D001447 ORTHO05D008204 4.6e-63 244.6 146 87.0
Aa31sc55G60 Aethionema arabicum HOM05D001447 ORTHO05D008204 6.0e-63 244.2 145 88.3
Os03g0811100 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D008204 3.0e-62 241.9 144 87.5
Psat0s3604g0040 Pisum sativum HOM05D001447 ORTHO05D008204 5.1e-62 241.1 146 84.9
HPP92_003245 Vanilla planifolia HOM05D001447 ORTHO05D008204 5.1e-62 241.1 146 84.9
Duzib150G1307 Durio zibethinus HOM05D001447 ORTHO05D008204 3.3e-61 238.4 170 78.2
Hma1.2p1_1043F.1_g251250 Hydrangea macrophylla HOM05D001447 ORTHO05D008204 8.2e-60 233.8 145 86.9
SMO141G0042 Selaginella moellendorffii HOM05D001447 ORTHO05D008204 1.4e-59 233.0 146 82.9
EL10Ac4g10182 Beta vulgaris HOM05D001447 ORTHO05D008204 4.1e-59 231.5 141 87.2
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 1.2e-58 229.9 135 87.4
AagrBONN_evm.TU.Sc2ySwM_228.1203 Anthoceros agrestis HOM05D001447 ORTHO05D008204 2.6e-58 228.8 146 80.8
Mapoly0034s0094 Marchantia polymorpha HOM05D001447 ORTHO05D008204 3.4e-58 228.4 146 80.1
Pp3c15_25050 Physcomitrium patens HOM05D001447 ORTHO05D008204 4.5e-58 228.0 146 79.5
CBR_g18769 Chara braunii HOM05D001447 ORTHO05D008204 1.5e-53 213.0 148 73.6
MBI13_g04765_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D008204 3.7e-52 208.4 142 79.6
Haze_23186 Corylus avellana HOM05D001447 ORTHO05D008204 5.3e-51 204.5 117 89.7
CSS0048252 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D008204 3.8e-49 198.4 118 88.1
PRCOL_00004019 Prasinoderma coloniale HOM05D001447 ORTHO05D008204 6.1e-47 191.0 144 67.4
MD11G1187400 Malus domestica HOM05D001447 ORTHO05D008204 1.7e-44 183.0 109 87.2
Cre05.g242000 Chlamydomonas reinhardtii HOM05D001447 ORTHO05D008204 1.8e-43 179.5 143 63.6
MCO04G050 Micromonas commoda HOM05D001447 ORTHO05D008204 1.9e-40 169.5 143 60.1
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 1.7e-28 129.8 76 88.2
SGA_v2.0_scaffold3G01472 Striga asiatica HOM05D001447 ORTHO05D008204 1.1e-27 127.1 69 92.8
SEGI_28588 Sequoiadendron giganteum HOM05D001447 ORTHO05D008204 7.0e-27 124.4 81 79.0
SEGI_14967 Sequoiadendron giganteum HOM05D001447 ORTHO05D008204 1.6e-26 123.2 71 85.9
MCO16G689 Micromonas commoda HOM05D001447 ORTHO05D008204 7.7e-18 94.4 146 41.1
TAR383G0171 Trochodendron aralioides HOM05D001447 ORTHO05D008204 8.9e-06 54.3 33 72.7


User provided reference genes

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