Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 3.5e-98 361.7 191 100.0
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 3.1e-54 215.7 202 59.9
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 6.9e-54 214.5 203 62.1
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 1.2e-53 213.8 199 62.8
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.7e-52 209.9 202 60.9
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 2.2e-52 209.5 204 63.2
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 4.9e-52 208.4 204 61.8
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 6.5e-52 208.0 197 61.4
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 6.5e-52 208.0 200 58.5
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 1.9e-51 206.5 197 62.9
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.9e-51 206.5 195 62.1
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 4.2e-51 205.3 198 59.6
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 7.1e-51 204.5 204 61.3
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 1.2e-50 203.8 203 60.1
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 1.2e-50 203.8 205 57.6
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 1.2e-50 203.8 200 61.0
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 1.2e-50 203.8 204 59.8
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 1.6e-50 203.4 198 60.1
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 1.6e-50 203.4 203 59.6
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.1e-50 203.0 202 59.9
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 2.1e-50 203.0 203 57.6
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 2.1e-50 203.0 204 60.3
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.7e-50 202.6 205 57.6
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 2.7e-50 202.6 204 60.3
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 2.7e-50 202.6 203 58.6
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 2.7e-50 202.6 197 60.9
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 4.6e-50 201.8 204 60.8
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 4.6e-50 201.8 197 58.9
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 6.0e-50 201.4 203 59.1
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 6.0e-50 201.4 201 58.7
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 1.0e-49 200.7 199 59.8
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 1.0e-49 200.7 203 59.1
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 1.0e-49 200.7 203 59.1
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 1.0e-49 200.7 203 59.1
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 1.0e-49 200.7 201 62.2
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 1.0e-49 200.7 205 59.5
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 1.0e-49 200.7 204 58.8
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 1.3e-49 200.3 194 57.7
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 1.8e-49 199.9 199 60.8
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 2.3e-49 199.5 192 58.9
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 3.9e-49 198.7 198 59.1
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 6.7e-49 198.0 194 58.8
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 1.5e-48 196.8 201 59.7
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 2.5e-48 196.1 208 58.7
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 5.7e-48 194.9 202 56.9
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 9.6e-48 194.1 203 56.2
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.3e-47 193.7 196 60.7
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 1.3e-47 193.7 201 57.7
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 1.6e-47 193.4 198 59.1
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.6e-47 193.4 205 59.5
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 2.1e-47 193.0 209 59.8
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 2.1e-47 193.0 200 58.5
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 3.7e-47 192.2 205 57.1
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.8e-47 191.8 197 59.4
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 4.8e-47 191.8 198 57.6
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 4.8e-47 191.8 201 58.2
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 6.3e-47 191.4 195 60.0
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 8.2e-47 191.0 205 58.0
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 1.1e-46 190.7 198 59.1
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.1e-46 190.7 198 59.1
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 1.4e-46 190.3 198 58.6
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 1.4e-46 190.3 202 57.9
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.8e-46 189.9 197 59.4
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.8e-46 189.9 197 58.9
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.8e-46 189.9 197 58.9
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 1.8e-46 189.9 196 57.1
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 2.4e-46 189.5 191 57.6
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 4.1e-46 188.7 201 56.2
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 1.2e-45 187.2 199 58.8
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 1.2e-45 187.2 206 57.8
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 1.2e-45 187.2 203 57.1
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 1.5e-45 186.8 203 59.1
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 3.4e-45 185.7 199 55.8
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 4.5e-45 185.3 195 55.9
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 4.5e-45 185.3 200 57.0
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 4.5e-45 185.3 202 57.4
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 5.9e-45 184.9 202 57.4
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 1.0e-44 184.1 206 56.8
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.7e-44 183.3 201 58.7
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 1.7e-44 183.3 139 71.2
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 1.7e-44 183.3 193 57.5
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 1.7e-44 183.3 199 58.8
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 2.2e-44 183.0 205 54.1
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 2.9e-44 182.6 200 60.0
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 2.9e-44 182.6 196 59.7
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 3.8e-44 182.2 195 54.9
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 3.8e-44 182.2 200 56.0
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 5.0e-44 181.8 192 56.8
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 6.5e-44 181.4 206 56.3
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 1.1e-43 180.6 195 55.9
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 2.5e-43 179.5 192 55.7
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 5.5e-43 178.3 199 56.3
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 9.3e-43 177.6 206 57.8
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 1.2e-42 177.2 205 53.7
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 1.2e-42 177.2 205 53.7
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 1.2e-42 177.2 201 58.2
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 2.7e-42 176.0 207 53.1
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 2.7e-42 176.0 207 53.1
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 3.6e-42 175.6 201 54.2
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 3.6e-42 175.6 199 56.8
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 4.6e-42 175.3 195 60.0
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.3e-41 173.7 202 55.0
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 1.3e-41 173.7 201 55.7
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 1.3e-41 173.7 196 54.1
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 1.3e-41 173.7 206 53.9
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 1.8e-41 173.3 193 53.4
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 2.3e-41 172.9 195 56.4
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 3.0e-41 172.6 202 54.5
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 5.1e-41 171.8 208 53.4
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 5.1e-41 171.8 202 55.4
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 6.7e-41 171.4 206 54.9
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 1.1e-40 170.6 202 54.5
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 1.1e-40 170.6 209 53.1
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 1.9e-40 169.9 199 55.8
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 4.3e-40 168.7 205 51.7
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 4.3e-40 168.7 205 51.2
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 4.3e-40 168.7 205 51.7
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 4.3e-40 168.7 205 51.7
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 4.3e-40 168.7 175 56.0
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 5.7e-40 168.3 205 51.2
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 1.6e-39 166.8 203 54.2
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 2.2e-39 166.4 198 52.0
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 3.7e-39 165.6 192 51.6
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 8.2e-39 164.5 208 51.9
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 8.2e-39 164.5 182 52.2
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 1.2e-37 160.6 197 49.7
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 1.5e-37 160.2 208 51.0
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 2.6e-37 159.5 208 51.0
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 1.9e-35 153.3 159 54.1
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.5e-35 152.9 142 56.3
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 3.2e-35 152.5 201 53.2
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 3.2e-35 152.5 164 48.8
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 5.5e-35 151.8 169 55.0
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 5.5e-35 151.8 179 45.8
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 3.6e-34 149.1 193 50.3
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 9.7e-32 141.0 174 49.4
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 6.3e-31 138.3 139 53.2
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 8.2e-31 137.9 194 45.9
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 1.4e-30 137.1 194 45.4
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 1.4e-30 137.1 115 61.7
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 1.2e-29 134.0 194 44.8
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.1e-27 127.5 203 44.3
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 1.1e-27 127.5 138 50.0
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 3.2e-27 125.9 147 49.0
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 1.6e-26 123.6 179 50.3
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 5.3e-22 108.6 122 54.1
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 5.3e-22 108.6 195 40.0
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 3.5e-21 105.9 158 44.9
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 2.9e-20 102.8 140 46.4
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.1e-18 96.7 184 35.9
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 2.1e-18 96.7 129 46.5
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.8e-17 93.6 129 45.0
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 3.0e-17 92.8 78 61.5
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 4.0e-17 92.4 132 44.7
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 8.8e-17 91.3 124 42.7
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.8e-15 85.5 60 70.0
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.1e-14 82.4 132 43.2
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 2.5e-11 73.2 160 40.0
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 3.6e-10 69.3 142 38.7
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 1.2e-08 64.3 115 33.9


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