Gene: SGA_v2.0_scaffold391G50640
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold391G50640
- Transcript Identifier SGA_v2.0_scaffold391T50640
- Gene Type Coding gene
- Location scaffold391 : 179261-190423 : positive
Gene Family Information
- ID HOM05D002973
- #Genes/#Species 232/93
- Phylogenetic origin
- ID ORTHO05D003383
- #Genes/#Species 227/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Glyceraldehyde-3-phosphate dehydrogenase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015979 | IEA | InterPro | photosynthesis | |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT3G25990 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030145 | IEA | InterPro | manganese ion binding | |
| GO:0016620 | IEA | InterPro | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | |
| GO:0051287 | IEA | InterPro | NAD binding | |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT1G13450 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G13450 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G13450 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G13450 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT1G13450 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009523 | IEA | InterPro | photosystem II | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G13450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009388 | Photosystem II PsbY |
| IPR001005 | SANT/Myb domain |
| IPR020829 | Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain |
| IPR020828 | Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain |
| IPR044822 | Myb/SANT-like DNA-binding domain 4 |
| IPR036291 | NAD(P)-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 1.1.1.2.13 | Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY |
| 15.5.20 | RNA biosynthesis.transcriptional regulation.transcription factor (Trihelix) |