Gene: Sopen10g028800

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g028800
  • Transcript Identifier Sopen10g028800.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 76693815-76694399 : positive

Gene Family Information

  • ID HOM05D004549
  • #Genes/#Species 159/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g028800.1

Descriptions

  • Description Photosystem II core complex proteins psbY, chloroplast precursor (L-arginine-metabolizing enzyme) (L-AME) | Photosystem II protein psbY-2 (psbY-A2)) - Spinacia oleracea (Spinach), PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood. | photosystem II BY (PSBY) | FUNCTIONS IN: manganese ion binding | INVOLVED IN: photosynthesis | LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast photosystem II, photosystem II | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbY
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
InterProphotosynthesis
GO:0045454
ISO
PLAZA Integrative Orthologycell redox homeostasis AT1G67740
GO:0010205
ISO
PLAZA Integrative Orthologyphotoinhibition AT1G67740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030145
IEA
InterPromanganese ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009523
IEA
InterProphotosystem II
GO:0016021
IEA
InterProintegral component of membrane
GO:0009533
ISO
PLAZA Integrative Orthologychloroplast stromal thylakoid AT1G67740
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G67740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038760 Photosystem II PsbY, plant
IPR009388 Photosystem II PsbY
Mapman id Description
1.1.1.2.13 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY