Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0005980 Simmondsia chinensis HOM05D001605 ORTHO05D007904 1.7e-70 269.2 135 100.0
Sc09g0005960 Simmondsia chinensis HOM05D001605 ORTHO05D007904 8.9e-48 193.7 134 76.1
EL10Ac7g16663 Beta vulgaris HOM05D001605 ORTHO05D007904 2.1e-20 102.8 136 47.8
QL08p053377 Quercus lobata HOM05D001605 ORTHO05D007904 2.5e-18 95.9 132 38.6
Hund17736 Selenicereus undatus HOM05D001605 ORTHO05D007904 2.5e-18 95.9 145 46.2
AUR62042514 Chenopodium quinoa HOM05D001605 ORTHO05D007904 2.8e-17 92.4 135 45.9
Ah.05g168450 Amaranthus hybridus HOM05D001605 ORTHO05D007904 1.1e-16 90.5 137 48.2
TAR636G1950 Trochodendron aralioides HOM05D001605 ORTHO05D007904 1.8e-16 89.7 134 41.8
FvH4_7g18411 Fragaria vesca HOM05D001605 ORTHO05D007904 5.3e-16 88.2 136 41.9
FAN01G1699 Fragaria x ananassa HOM05D001605 ORTHO05D007904 5.3e-16 88.2 136 41.9
FAN06G2826 Fragaria x ananassa HOM05D001605 ORTHO05D007904 5.3e-16 88.2 136 41.9
GSVIVG01016203001 Vitis vinifera HOM05D001605 ORTHO05D007904 6.9e-16 87.8 135 42.2
Actinidia18543 Actinidia chinensis HOM05D001605 ORTHO05D007904 9.0e-16 87.4 137 42.3
FAN10G1517 Fragaria x ananassa HOM05D001605 ORTHO05D007904 4.5e-15 85.1 136 41.2
Migut.F01946 Erythranthe guttata HOM05D001605 ORTHO05D007904 7.6e-15 84.3 135 40.0
AUR62027342 Chenopodium quinoa HOM05D001605 ORTHO05D007904 2.9e-14 82.4 64 65.6
FAN03G0306 Fragaria x ananassa HOM05D001605 ORTHO05D007904 2.9e-14 82.4 136 40.4
Nn2g13838 Nelumbo nucifera HOM05D001605 ORTHO05D007904 3.8e-14 82.0 134 42.5
MD01G1100800 Malus domestica HOM05D001605 ORTHO05D007904 6.4e-14 81.3 141 40.4
Lsat_1_v5_gn_2_112001 Lactuca sativa HOM05D001605 ORTHO05D007904 1.1e-13 80.5 134 39.6
Cfa001787 Carpinus fangiana HOM05D001605 ORTHO05D007904 4.2e-13 78.6 140 35.7
CiPaw.01G266900 Carya illinoinensis HOM05D001605 ORTHO05D007904 1.2e-12 77.0 143 35.7
Lalb_Chr06g0166251 Lupinus albus HOM05D001605 ORTHO05D007904 1.6e-12 76.6 131 37.4
ECA238G1123 Erigeron canadensis HOM05D001605 ORTHO05D007904 7.9e-12 74.3 125 37.6
CAN.G459.35 Capsicum annuum HOM05D001605 ORTHO05D007904 1.3e-11 73.6 142 37.3
Prupe.2G206300 Prunus persica HOM05D001605 ORTHO05D007904 1.3e-11 73.6 141 36.9
Atru.chr12.877 Acer truncatum HOM05D001605 ORTHO05D007904 2.3e-11 72.8 138 37.0
arahy.Tifrunner.gnm1.ann1.NQY93W Arachis hypogaea HOM05D001605 ORTHO05D007904 6.7e-11 71.2 132 37.1
Cpa.g.sc53.150 Carica papaya HOM05D001605 ORTHO05D007904 6.7e-11 71.2 128 37.5
HanXRQChr14g0456521 Helianthus annuus HOM05D001605 ORTHO05D007904 1.5e-10 70.1 136 33.8
Nitab4.5_0002285g0040 Nicotiana tabacum HOM05D001605 ORTHO05D007904 1.5e-10 70.1 134 39.6
arahy.Tifrunner.gnm1.ann1.MQG1NS Arachis hypogaea HOM05D001605 ORTHO05D007904 1.9e-10 69.7 132 36.4
Potri.008G032800 Populus trichocarpa HOM05D001605 ORTHO05D007904 2.5e-10 69.3 139 36.7
RcHm_v2.0_Chr1g0362241 Rosa chinensis HOM05D001605 ORTHO05D007904 2.5e-10 69.3 137 38.0
Aa31LG1G21060 Aethionema arabicum HOM05D001605 ORTHO05D007904 5.6e-10 68.2 140 34.3
MD07G1167800 Malus domestica HOM05D001605 ORTHO05D007904 9.6e-10 67.4 108 35.2
TWI15G0385 Tripterygium wilfordii HOM05D001605 ORTHO05D007904 2.1e-09 66.2 138 37.7
Sabra08G0021700 Salix brachista HOM05D001605 ORTHO05D007904 2.8e-09 65.9 135 35.6
Solyc11g008150.3 Solanum lycopersicum HOM05D001605 ORTHO05D007904 4.8e-09 65.1 139 33.8
Glyma.20G112800 Glycine max HOM05D001605 ORTHO05D007904 6.2e-09 64.7 127 35.4
Glyma.10G276900 Glycine max HOM05D001605 ORTHO05D007904 8.2e-09 64.3 137 37.2
Cc02_g10740 Coffea canephora HOM05D001605 ORTHO05D007904 1.1e-08 63.9 139 34.5
Aqoxy2G01687_Aqoxy2G01688 Aquilegia oxysepala HOM05D001605 ORTHO05D007904 1.8e-08 63.2 126 35.7
Phvul.007G024600 Phaseolus vulgaris HOM05D001605 ORTHO05D007904 2.4e-08 62.8 124 33.9
TPR.G26273 Trifolium pratense HOM05D001605 ORTHO05D007904 2.4e-08 62.8 133 34.6
Nitab4.5_0004987g0010 Nicotiana tabacum HOM05D001605 ORTHO05D007904 3.1e-08 62.4 61 47.5
Peaxi162Scf00145g00221 Petunia axillaris HOM05D001605 ORTHO05D007904 3.1e-08 62.4 135 34.8
Psat6g230120 Pisum sativum HOM05D001605 ORTHO05D007904 4.0e-08 62.0 130 38.5
MBI01_g12684_MAGBIO Magnolia biondii HOM05D001605 ORTHO05D007904 5.3e-08 61.6 140 33.6
THA.LOC104816433 Tarenaya hassleriana HOM05D001605 ORTHO05D007904 9.0e-08 60.8 140 35.0
Rhsim03G0113100 Rhododendron simsii HOM05D001605 ORTHO05D007904 1.2e-07 60.5 138 34.8
BcaC06g32132 Brassica carinata HOM05D001605 ORTHO05D007904 1.5e-07 60.1 143 34.3
C09p72590 Brassica napus HOM05D001605 ORTHO05D007904 1.5e-07 60.1 143 34.3
BolC9t59999H Brassica oleracea HOM05D001605 ORTHO05D007904 1.5e-07 60.1 143 34.3
Thhalv10015856m.g Eutrema salsugineum HOM05D001605 ORTHO05D007904 1.5e-07 60.1 137 36.5
AT5G04290 Arabidopsis thaliana HOM05D001605 ORTHO05D007904 3.4e-07 58.9 136 34.6
Manes.07G094600 Manihot esculenta HOM05D001605 ORTHO05D007904 4.5e-07 58.5 65 47.7
Sopen11g003960 Solanum pennellii HOM05D001605 ORTHO05D007904 4.5e-07 58.5 106 34.0
CARHR208990 Cardamine hirsuta HOM05D001605 ORTHO05D007904 7.6e-07 57.8 137 34.3
ClCG08G007840 Citrullus lanatus HOM05D001605 ORTHO05D007904 1.0e-06 57.4 141 33.3
BraA10t45232Z Brassica rapa HOM05D001605 ORTHO05D007904 1.3e-06 57.0 149 34.2
Carub.0006s0324 Capsella rubella HOM05D001605 ORTHO05D007904 1.3e-06 57.0 136 33.8
BcaC06g32133 Brassica carinata HOM05D001605 ORTHO05D007904 1.7e-06 56.6 143 36.4
PSO339G4771 Papaver somniferum HOM05D001605 ORTHO05D007904 1.7e-06 56.6 148 35.1
PGR044G1910 Punica granatum HOM05D001605 ORTHO05D007904 1.7e-06 56.6 134 32.8
Thecc.10G086900 Theobroma cacao HOM05D001605 ORTHO05D007904 1.7e-06 56.6 141 31.2
A10p31880 Brassica napus HOM05D001605 ORTHO05D007904 2.2e-06 56.2 149 34.2
Sed0007773 Sechium edule HOM05D001605 ORTHO05D007904 2.2e-06 56.2 136 33.8
AL6G13920 Arabidopsis lyrata HOM05D001605 ORTHO05D007904 3.8e-06 55.5 136 33.8
Lj3A937T101 Lonicera japonica HOM05D001605 ORTHO05D007904 3.8e-06 55.5 67 40.3
PSO063G0750 Papaver somniferum HOM05D001605 ORTHO05D007904 3.8e-06 55.5 148 33.1
SalBow4G1337 Salvia bowleyana HOM05D001605 ORTHO05D007904 3.8e-06 55.5 136 30.1
unitig_37.g12317 Utricularia gibba HOM05D001605 ORTHO05D007904 4.9e-06 55.1 126 31.7
vmacro07188 Vaccinium macrocarpon HOM05D001605 ORTHO05D007904 4.9e-06 55.1 162 29.6
Rhsim09G0146800 Rhododendron simsii HOM05D001605 ORTHO05D007904 6.5e-06 54.7 133 31.6
Sp6g38450 Schrenkiella parvula HOM05D001605 ORTHO05D007904 6.5e-06 54.7 141 34.0
Ciclev10030480m.g Citrus clementina HOM05D001605 ORTHO05D007904 8.4e-06 54.3 144 30.6
Duzib114G0274 Durio zibethinus HOM05D001605 ORTHO05D007904 8.4e-06 54.3 141 31.9


User provided reference genes

Program Settings