Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 4.8e-87 325.5 329 100.0
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 2.3e-57 226.9 329 80.9
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 7.4e-56 221.9 329 82.1
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.4e-54 217.6 330 79.7
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 3.1e-54 216.5 330 79.4
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 7.7e-53 211.8 329 79.0
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 2.5e-51 206.8 326 71.5
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 2.7e-50 203.4 327 65.7
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 8.8e-49 198.4 327 78.3
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 9.7e-48 194.9 327 78.6
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 9.7e-48 194.9 324 79.6
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 2.4e-46 190.3 327 77.1
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 3.1e-46 189.9 327 73.1
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 5.3e-46 189.1 327 72.8
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 9.1e-46 188.3 327 78.0
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 2.9e-44 183.3 329 77.5
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 2.9e-44 183.3 326 73.9
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.9e-44 183.3 328 75.9
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 3.8e-44 183.0 319 78.4
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 5.0e-44 182.6 329 77.2
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 6.5e-44 182.2 327 76.8
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 6.5e-44 182.2 326 72.4
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 8.5e-44 181.8 330 77.6
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.1e-43 181.4 327 77.7
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 2.5e-43 180.3 327 74.9
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 7.2e-43 178.7 327 77.7
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.2e-42 177.9 327 77.4
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 8.0e-42 175.3 331 76.4
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 1.4e-41 174.5 330 76.1
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 1.8e-41 174.1 328 74.4
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 3.0e-41 173.3 327 77.1
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 3.0e-41 173.3 326 76.1
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 5.2e-41 172.6 326 77.0
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 5.2e-41 172.6 327 73.7
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 5.2e-41 172.6 311 72.7
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.2e-40 171.4 327 69.1
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.5e-40 171.0 327 74.3
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.4e-40 169.9 331 75.5
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 3.4e-40 169.9 328 74.1
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 4.4e-40 169.5 327 70.3
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 9.8e-40 168.3 327 77.4
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 9.8e-40 168.3 327 75.8
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 2.2e-39 167.2 320 75.3
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 2.8e-39 166.8 327 74.9
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 2.8e-39 166.8 327 74.9
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 2.8e-39 166.8 324 70.4
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 3.7e-39 166.4 327 69.4
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 4.8e-39 166.0 324 72.8
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.1e-38 164.9 318 70.4
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 1.1e-38 164.9 327 71.6
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.1e-38 164.9 317 77.6
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.1e-38 162.9 317 72.2
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 5.4e-38 162.5 327 73.1
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 5.4e-38 162.5 327 73.1
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 5.4e-38 162.5 318 77.0
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 7.0e-38 162.2 327 72.8
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 9.1e-38 161.8 327 72.8
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.2e-37 161.4 322 75.5
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 1.2e-37 161.4 326 72.4
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 4.5e-37 159.5 324 72.2
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 7.7e-37 158.7 325 73.2
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 5.0e-36 156.0 327 72.8
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 6.6e-36 155.6 319 75.5
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 8.6e-36 155.2 324 72.2
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 8.6e-36 155.2 324 71.9
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.5e-35 154.5 327 46.2
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 7.2e-35 152.1 295 60.7
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 9.5e-35 151.8 322 71.4
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 1.6e-34 151.0 325 71.4
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 2.8e-34 150.2 327 71.6
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 4.7e-34 149.4 312 77.9
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 8.0e-34 148.7 336 74.1
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.0e-33 148.3 315 72.7
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 1.4e-33 147.9 325 69.5
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 1.8e-33 147.5 328 72.0
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 2.3e-33 147.1 326 71.2
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 1.5e-32 144.4 329 64.1
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 1.7e-31 141.0 328 71.0
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 2.2e-31 140.6 330 62.4
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 4.9e-31 139.4 330 62.4
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 8.3e-31 138.7 328 61.6
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 8.3e-31 138.7 327 72.2
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.1e-30 138.3 324 71.9
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.8e-30 137.5 324 71.9
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.8e-30 137.5 328 68.6
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 7.0e-30 135.6 328 61.3
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.3e-28 131.3 328 62.2
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 2.9e-28 130.2 328 62.8
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 5.0e-28 129.4 297 76.1
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 7.3e-27 125.6 87 67.8
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.2e-26 124.8 328 64.9
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.6e-26 123.2 79 72.2
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 2.3e-25 120.6 307 70.7
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 6.8e-25 119.0 296 38.9
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 2.0e-24 117.5 303 73.9
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.4e-24 116.7 303 72.3
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 3.7e-23 113.2 327 47.4
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 8.3e-23 112.1 289 76.1
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 7.8e-21 105.5 329 56.2
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 2.5e-19 100.5 332 61.1
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 3.3e-19 100.1 332 61.1
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 4.3e-19 99.8 332 60.8
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 4.3e-19 99.8 332 60.8
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.6e-18 96.7 278 72.7
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 3.6e-18 96.7 314 40.1
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.5e-16 91.3 63 65.1
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.2e-15 87.4 278 70.9
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.7e-13 80.5 57 61.4
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.3e-12 78.2 56 62.5
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.5e-11 74.7 60 55.0
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 5.6e-11 72.8 58 58.6
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 6.2e-10 69.3 91 39.6
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 1.1e-09 68.6 74 45.9
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.2e-08 65.1 50 56.0
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 2.0e-08 64.3 65 44.6
Pp3c18_18510 Physcomitrium patens HOM05D005956 ORTHO05D007197 2.0e-08 64.3 68 42.6
TPR.G21350 Trifolium pratense HOM05D005956 ORTHO05D007197 1.7e-07 61.2 65 41.5
Medtr6g003960 Medicago truncatula HOM05D005956 ORTHO05D007197 2.2e-07 60.8 65 41.5
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 2.9e-07 60.5 65 41.5
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 1.1e-06 58.5 65 41.5
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 1.4e-06 58.2 64 40.6
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 2.4e-06 57.4 65 40.0
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 3.2e-06 57.0 64 37.5
Lalb_Chr24g0392721 Lupinus albus HOM05D005956 ORTHO05D007197 5.4e-06 56.2 65 38.5
Nitab4.5_0005679g0020 Nicotiana tabacum HOM05D005956 ORTHO05D007197 5.4e-06 56.2 66 37.9
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 5.4e-06 56.2 42 57.1
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 7.1e-06 55.8 64 42.2
SEGI_01405 Sequoiadendron giganteum HOM05D001557 ORTHO05D001299 9.2e-06 55.5 63 39.7


User provided reference genes

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