Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 1.3e-266 922.5 470 100.0
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 6.2e-64 249.2 324 46.9
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.1e-63 248.4 383 41.3
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.4e-63 248.1 375 42.4
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.1e-63 246.9 392 39.8
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 4.0e-63 246.5 391 40.2
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 6.9e-63 245.7 323 45.8
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 4.9e-61 239.6 391 39.4
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 9.3e-60 235.3 393 38.2
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 2.1e-59 234.2 401 37.2
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 3.0e-58 230.3 379 38.8
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 8.7e-58 228.8 392 37.2
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 9.6e-57 225.3 384 38.3
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 2.1e-56 224.2 473 34.9
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 3.7e-56 223.4 405 37.3
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 4.8e-56 223.0 384 37.5
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 1.8e-55 221.1 366 38.0
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.8e-55 221.1 384 39.1
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 4.0e-55 219.9 383 37.3
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.6e-54 217.2 395 38.2
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 2.6e-54 217.2 362 39.5
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.7e-53 214.5 384 36.7
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 1.7e-53 214.5 363 37.7
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.1e-52 211.8 371 38.5
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.4e-52 211.5 397 36.8
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 5.5e-52 209.5 382 35.9
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 1.6e-51 208.0 393 36.6
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 3.5e-51 206.8 380 36.6
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 3.9e-50 203.4 436 34.9
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.5e-49 201.4 390 35.1
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 3.3e-49 200.3 336 40.2
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 3.3e-49 200.3 384 35.4
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 3.3e-49 200.3 411 34.8
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 9.6e-49 198.7 334 39.8
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.6e-48 198.0 424 35.1
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 1.4e-47 194.9 418 34.0
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.4e-47 194.1 393 35.9
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 6.9e-47 192.6 388 35.1
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 2.0e-46 191.0 350 36.3
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.0e-45 188.7 396 33.3
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 8.4e-45 185.7 385 33.5
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 8.4e-45 185.7 406 31.5
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.1e-44 185.3 349 36.7
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 9.3e-44 182.2 383 33.2
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 1.6e-43 181.4 380 33.4
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 2.1e-43 181.0 380 33.4
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 2.1e-43 181.0 381 33.3
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 3.5e-43 180.3 379 33.8
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 3.5e-43 180.3 386 33.9
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 6.1e-43 179.5 380 33.7
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 1.3e-42 178.3 356 36.8
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 1.5e-41 174.9 406 33.0
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.9e-41 174.5 379 33.0
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 3.3e-41 173.7 379 33.0
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 4.3e-41 173.3 387 32.6
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 7.4e-41 172.6 385 32.7
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 1.1e-39 168.7 366 34.7
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 4.1e-39 166.8 380 32.1
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 1.5e-38 164.9 379 35.1
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 5.0e-37 159.8 383 31.9
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.4e-36 158.3 358 33.8
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 1.9e-36 157.9 390 31.8
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 2.5e-36 157.5 417 29.5
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 1.6e-35 154.8 398 30.4
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 2.1e-35 154.5 360 31.7
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 3.6e-35 153.7 164 50.6
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 3.7e-32 143.7 163 48.5
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 6.3e-32 142.9 314 33.8
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.4e-31 141.7 373 30.6
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.4e-31 141.7 164 47.0
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.0e-29 135.6 387 30.2
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 1.0e-29 135.6 314 31.2
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 2.2e-29 134.4 405 28.6
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 5.0e-29 133.3 167 48.5
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 8.5e-29 132.5 132 51.5
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.1e-28 132.1 292 31.8
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.5e-28 131.0 174 43.7
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 4.2e-28 130.2 265 37.7
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 9.4e-28 129.0 147 48.3
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.9e-26 123.6 153 48.4
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 3.9e-26 123.6 124 50.0
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 3.7e-24 117.1 179 41.3
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.4e-23 115.2 126 49.2
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 1.8e-23 114.8 133 45.1
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 5.3e-23 113.2 133 45.9
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.5e-22 110.5 118 49.2
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 2.9e-21 107.5 115 48.7
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 6.5e-21 106.3 204 35.3
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 5.5e-20 103.2 170 40.0
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 9.4e-20 102.4 271 29.9
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 8.0e-19 99.4 131 42.7
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.4e-18 98.6 135 43.7
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 1.1e-17 95.5 306 30.1
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 2.6e-17 94.4 164 40.2
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 4.8e-16 90.1 133 45.1
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 7.0e-15 86.3 131 42.7
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 1.0e-13 82.4 101 45.5
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 4.2e-12 77.0 89 47.2
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 3.6e-11 73.9 62 61.3
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 2.3e-10 71.2 93 45.2
Sc20g0005730 Simmondsia chinensis HOM05D025749 ORTHO05D018282 2.3e-10 71.2 101 40.6
Ca_03152_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 2.0e-09 68.2 73 46.6
SHI17547 Sapria himalayana HOM05D006564 ORTHO05D007772 3.4e-09 67.4 65 47.7
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 9.8e-09 65.9 127 31.5
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 6.3e-08 63.2 60 55.0
Sc07g0004710 Simmondsia chinensis HOM05D025749 ORTHO05D007772 1.1e-07 62.4 80 36.2
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 1.6e-06 58.5 93 36.6


User provided reference genes

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