Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0006700 Simmondsia chinensis HOM05D005358 ORTHO05D006384 1.4e-145 519.6 268 100.0
Nn5g28290 Nelumbo nucifera HOM05D005358 ORTHO05D006384 7.0e-113 411.0 272 76.5
QL09p034583 Quercus lobata HOM05D005358 ORTHO05D006384 6.0e-112 407.9 268 78.4
Prupe.1G497100 Prunus persica HOM05D005358 ORTHO05D006384 8.6e-111 404.1 278 75.2
CiPaw.05G221300 Carya illinoinensis HOM05D005358 ORTHO05D006384 3.3e-110 402.1 274 76.6
Duzib093G1131 Durio zibethinus HOM05D005358 ORTHO05D006384 9.5e-110 400.6 277 76.9
Lj1g0002097 Lotus japonicus HOM05D005358 ORTHO05D006384 9.5e-110 400.6 275 76.0
MD15G1348200 Malus domestica HOM05D005358 ORTHO05D006384 2.8e-109 399.1 273 74.7
Dinv07219 Davidia involucrata HOM05D005358 ORTHO05D006384 4.7e-109 398.3 273 77.7
Gohir.D05G237400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 4.7e-109 398.3 271 77.1
Gorai.009G245800 Gossypium raimondii HOM05D005358 ORTHO05D006384 6.2e-109 397.9 271 77.5
FAN15G1035 Fragaria x ananassa HOM05D005358 ORTHO05D006384 8.1e-109 397.5 275 75.3
FAN20G2528 Fragaria x ananassa HOM05D005358 ORTHO05D006384 8.1e-109 397.5 275 74.9
Gohir.A05G235100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 1.8e-108 396.4 272 77.2
FAN27G1910 Fragaria x ananassa HOM05D005358 ORTHO05D006384 2.3e-108 396.0 275 74.5
CiPaw.06G031000 Carya illinoinensis HOM05D005358 ORTHO05D006384 5.2e-108 394.8 264 76.9
Lalb_Chr11g0065911 Lupinus albus HOM05D005358 ORTHO05D006384 1.2e-107 393.7 275 74.5
CANSAT25G3496 Cannabis sativa HOM05D005358 ORTHO05D006384 2.0e-107 392.9 273 74.7
PGR042G4000 Punica granatum HOM05D005358 ORTHO05D006384 2.0e-107 392.9 278 75.2
TWI34G1827 Tripterygium wilfordii HOM05D005358 ORTHO05D006384 2.0e-107 392.9 271 73.8
Gohir.A01G189100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 3.4e-107 392.1 277 75.8
CSS0039743 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 4.4e-107 391.7 271 74.9
CSS0029272 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 7.5e-107 391.0 271 74.9
RcHm_v2.0_Chr6g0295831 Rosa chinensis HOM05D005358 ORTHO05D006384 7.5e-107 391.0 275 74.5
Cpa.g.sc64.88 Carica papaya HOM05D005358 ORTHO05D006384 2.9e-106 389.0 276 75.4
Gohir.D01G180400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 2.9e-106 389.0 277 75.5
Gorai.002G222200 Gossypium raimondii HOM05D005358 ORTHO05D006384 2.9e-106 389.0 277 75.5
Hund26809 Selenicereus undatus HOM05D005358 ORTHO05D006384 2.9e-106 389.0 274 77.0
Cfa016019 Carpinus fangiana HOM05D005358 ORTHO05D006384 6.4e-106 387.9 276 75.4
FAN24G1660 Fragaria x ananassa HOM05D005358 ORTHO05D006384 6.4e-106 387.9 275 73.8
MD08G1162600 Malus domestica HOM05D005358 ORTHO05D006384 6.4e-106 387.9 277 72.6
Sabra02G0065500 Salix brachista HOM05D005358 ORTHO05D006384 8.3e-106 387.5 274 73.0
Duzib116G0356 Durio zibethinus HOM05D005358 ORTHO05D006384 1.1e-105 387.1 276 75.4
Potri.002G083500 Populus trichocarpa HOM05D005358 ORTHO05D006384 2.4e-105 386.0 275 74.2
Psat5g087360 Pisum sativum HOM05D005358 ORTHO05D006384 1.2e-104 383.6 274 74.5
GSVIVG01008866001 Vitis vinifera HOM05D005358 ORTHO05D006384 1.2e-104 383.6 275 73.5
MBI16_g07664_MAGBIO Magnolia biondii HOM05D005358 ORTHO05D006384 3.5e-104 382.1 275 72.0
COL.COLO4_08077 Corchorus olitorius HOM05D005358 ORTHO05D006384 4.6e-104 381.7 279 73.8
TAR628G0971 Trochodendron aralioides HOM05D005358 ORTHO05D006384 6.0e-104 381.3 277 71.5
Lj7A340T34 Lonicera japonica HOM05D005358 ORTHO05D006384 1.0e-103 380.6 269 74.7
Lju12250A0T27 Lonicera japonica HOM05D005358 ORTHO05D006384 1.0e-103 380.6 269 74.7
CSS0043679 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 1.3e-103 380.2 271 72.0
Cc10_g11890 Coffea canephora HOM05D005358 ORTHO05D006384 1.3e-103 380.2 275 74.5
Atru.chr13.1462 Acer truncatum HOM05D005358 ORTHO05D006384 1.7e-103 379.8 273 72.9
Atru.chr13.1484 Acer truncatum HOM05D005358 ORTHO05D006384 1.7e-103 379.8 273 72.9
Medtr3g088040 Medicago truncatula HOM05D005358 ORTHO05D006384 1.7e-103 379.8 275 73.1
arahy.Tifrunner.gnm1.ann1.L9FPHH Arachis hypogaea HOM05D005358 ORTHO05D006384 6.6e-103 377.9 276 74.6
Eucgr.F03789 Eucalyptus grandis HOM05D005358 ORTHO05D006384 1.1e-102 377.1 274 73.4
Thecc.08G125500 Theobroma cacao HOM05D005358 ORTHO05D006384 1.5e-102 376.7 277 73.3
Sopen06g020470 Solanum pennellii HOM05D005358 ORTHO05D006384 2.5e-102 375.9 281 71.5
Glyma.04G249700 Glycine max HOM05D005358 ORTHO05D006384 3.3e-102 375.6 276 74.3
vmacro12532 Vaccinium macrocarpon HOM05D005358 ORTHO05D006384 3.3e-102 375.6 268 73.5
DCAR_003551 Daucus carota HOM05D005358 ORTHO05D006384 4.3e-102 375.2 274 72.3
Solyc06g060340.3 Solanum lycopersicum HOM05D005358 ORTHO05D006384 5.6e-102 374.8 281 71.5
TPR.G21057 Trifolium pratense HOM05D005358 ORTHO05D006384 7.3e-102 374.4 274 73.0
ClCG08G005640 Citrullus lanatus HOM05D005358 ORTHO05D006384 1.2e-101 373.6 271 73.1
Actinidia03469 Actinidia chinensis HOM05D005358 ORTHO05D006384 1.6e-101 373.2 269 72.1
PGSC0003DMG400017556 Solanum tuberosum HOM05D005358 ORTHO05D006384 2.1e-101 372.9 281 71.9
MELO3C010608.2 Cucumis melo HOM05D005358 ORTHO05D006384 2.8e-101 372.5 274 74.1
Glyma.06G113200 Glycine max HOM05D005358 ORTHO05D006384 3.6e-101 372.1 276 74.3
CAN.G1040.10 Capsicum annuum HOM05D005358 ORTHO05D006384 4.7e-101 371.7 280 70.7
CsaV3_6G034480 Cucumis sativus L. HOM05D005358 ORTHO05D006384 6.2e-101 371.3 274 73.0
Aa31LG6G9330 Aethionema arabicum HOM05D005358 ORTHO05D006384 1.1e-100 370.5 269 72.1
BolC6t35202H Brassica oleracea HOM05D005358 ORTHO05D006384 2.4e-100 369.4 270 72.6
Carub.0001s3521 Capsella rubella HOM05D005358 ORTHO05D006384 2.4e-100 369.4 270 73.0
Sabra05G0134400 Salix brachista HOM05D005358 ORTHO05D006384 2.4e-100 369.4 275 71.6
HPP92_025043 Vanilla planifolia HOM05D005358 ORTHO05D006384 2.4e-100 369.4 270 71.9
HanXRQChr02g0053161 Helianthus annuus HOM05D005358 ORTHO05D006384 4.0e-100 368.6 271 72.7
BcaB04g17587 Brassica carinata HOM05D005358 ORTHO05D006384 5.2e-100 368.2 270 71.5
Nitab4.5_0000322g0160 Nicotiana tabacum HOM05D005358 ORTHO05D006384 5.2e-100 368.2 279 71.0
TAR376G0195 Trochodendron aralioides HOM05D005358 ORTHO05D006384 6.8e-100 367.9 272 71.3
Migut.N03279 Erythranthe guttata HOM05D005358 ORTHO05D006384 1.2e-99 367.1 270 73.0
BcaB07g33947 Brassica carinata HOM05D005358 ORTHO05D006384 1.5e-99 366.7 270 72.2
Migut.C01123 Erythranthe guttata HOM05D005358 ORTHO05D006384 1.5e-99 366.7 276 70.7
CARHR035950 Cardamine hirsuta HOM05D005358 ORTHO05D006384 2.0e-99 366.3 270 71.5
BcaC08g42851 Brassica carinata HOM05D005358 ORTHO05D006384 2.6e-99 365.9 270 72.2
A10p07510 Brassica napus HOM05D005358 ORTHO05D006384 2.6e-99 365.9 270 72.2
C06p00660 Brassica napus HOM05D005358 ORTHO05D006384 2.6e-99 365.9 270 72.2
BraSC36t46054Z Brassica rapa HOM05D005358 ORTHO05D006384 2.6e-99 365.9 270 72.2
HanXRQChr02g0053151 Helianthus annuus HOM05D005358 ORTHO05D006384 2.6e-99 365.9 275 70.9
AT1G44575 Arabidopsis thaliana HOM05D005358 ORTHO05D006384 3.4e-99 365.5 269 70.6
Sed0008649 Sechium edule HOM05D005358 ORTHO05D006384 3.4e-99 365.5 249 75.5
VMungo1309G1077 Vigna mungo HOM05D005358 ORTHO05D006384 3.4e-99 365.5 276 72.8
BcaC07g37296 Brassica carinata HOM05D005358 ORTHO05D006384 4.4e-99 365.2 270 71.1
BolC8t47572H Brassica oleracea HOM05D005358 ORTHO05D006384 4.4e-99 365.2 270 71.1
Sp1g33560 Schrenkiella parvula HOM05D005358 ORTHO05D006384 4.4e-99 365.2 267 72.3
Aqoxy6G00218 Aquilegia oxysepala HOM05D005358 ORTHO05D006384 5.8e-99 364.8 276 71.0
A08p06370 Brassica napus HOM05D005358 ORTHO05D006384 5.8e-99 364.8 270 71.1
BraA08t32644Z Brassica rapa HOM05D005358 ORTHO05D006384 5.8e-99 364.8 270 71.1
CDE02G0325 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 7.6e-99 364.4 273 72.9
FvH4_2g26970 Fragaria vesca HOM05D005358 ORTHO05D006384 9.9e-99 364.0 243 76.1
AL1G52370 Arabidopsis lyrata HOM05D005358 ORTHO05D006384 1.7e-98 363.2 228 78.5
C08p07310 Brassica napus HOM05D005358 ORTHO05D006384 2.2e-98 362.8 270 70.7
ECA233G3168 Erigeron canadensis HOM05D005358 ORTHO05D006384 2.2e-98 362.8 247 76.5
Oeu059439.1 Olea europaea HOM05D005358 ORTHO05D006384 2.9e-98 362.5 272 70.2
PSO528G0145 Papaver somniferum HOM05D005358 ORTHO05D006384 4.9e-98 361.7 275 70.5
Oeu028563.1 Olea europaea HOM05D005358 ORTHO05D006384 1.4e-97 360.1 272 69.1
Rhsim06G0103300 Rhododendron simsii HOM05D005358 ORTHO05D006384 1.9e-97 359.8 275 69.8
arahy.Tifrunner.gnm1.ann1.QP7RRL Arachis hypogaea HOM05D005358 ORTHO05D006384 2.4e-97 359.4 276 72.1
ATR0584G037 Amborella trichopoda HOM05D005358 ORTHO05D006384 3.2e-97 359.0 276 69.2
Lsat_1_v5_gn_6_35480 Lactuca sativa HOM05D005358 ORTHO05D006384 3.2e-97 359.0 270 71.5
MSTRG.22407 Avicennia marina HOM05D005358 ORTHO05D006384 5.4e-97 358.2 271 71.6
Os04g0690800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 7.1e-97 357.8 219 83.1
unitig_46.g18102 Utricularia gibba HOM05D005358 ORTHO05D006384 7.1e-97 357.8 269 69.1
Ciclev10002099m.g Citrus clementina HOM05D005358 ORTHO05D006384 9.2e-97 357.5 282 68.1
SGA_v2.0_scaffold25G11130 Striga asiatica HOM05D005358 ORTHO05D006384 9.2e-97 357.5 227 80.2
Nitab4.5_0004044g0020 Nicotiana tabacum HOM05D005358 ORTHO05D006384 1.6e-96 356.7 279 69.2
Os01g0869800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 2.7e-96 355.9 274 69.7
Thhalv10011718m.g Eutrema salsugineum HOM05D005358 ORTHO05D006384 4.6e-96 355.1 272 69.5
THA.LOC104817350 Tarenaya hassleriana HOM05D005358 ORTHO05D006384 7.8e-96 354.4 274 69.3
Phvul.009G125100 Phaseolus vulgaris HOM05D005358 ORTHO05D006384 6.6e-95 351.3 276 71.0
PSO170G3857 Papaver somniferum HOM05D005358 ORTHO05D006384 8.7e-95 350.9 275 68.4
AUR62019079 Chenopodium quinoa HOM05D005358 ORTHO05D006384 4.3e-94 348.6 199 84.9
SalBow6G1113 Salvia bowleyana HOM05D005358 ORTHO05D006384 2.1e-93 346.3 272 71.0
Peaxi162Scf00051g00910 Petunia axillaris HOM05D005358 ORTHO05D006384 6.2e-93 344.7 273 70.0
SEGI_26351 Sequoiadendron giganteum HOM05D005358 ORTHO05D006384 1.1e-92 344.0 239 74.1
Zm00001eb146510 Zea mays HOM05D005358 ORTHO05D006384 1.3e-90 337.0 194 85.1
Pp3c20_23430 Physcomitrium patens HOM05D005358 ORTHO05D006384 2.8e-85 319.3 211 74.4
Mapoly0013s0199 Marchantia polymorpha HOM05D005358 ORTHO05D006384 2.6e-83 312.8 284 61.3
SMO146G0179 Selaginella moellendorffii HOM05D005358 ORTHO05D006384 1.7e-82 310.1 197 77.2
AagrBONN_evm.TU.Sc2ySwM_368.1869 Anthoceros agrestis HOM05D005358 ORTHO05D006384 1.0e-79 300.8 232 65.9
CDE08G0239 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 6.2e-77 291.6 240 69.2
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.2e-75 287.3 170 82.4
Haze_00439 Corylus avellana HOM05D005358 ORTHO05D006384 1.2e-64 250.8 163 77.9
Manes.18G077312 Manihot esculenta HOM05D005358 ORTHO05D006384 4.6e-64 248.8 193 68.4
Ah.05g171100 Amaranthus hybridus HOM05D005358 ORTHO05D006384 3.9e-63 245.7 134 90.3
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 7.4e-62 241.5 161 73.3
Dinv27311 Davidia involucrata HOM05D005358 ORTHO05D006384 1.6e-61 240.4 196 69.9
Ca_16558_v3 Cicer arietinum L. HOM05D005358 ORTHO05D006384 2.8e-61 239.6 199 66.8
CBR_g40031 Chara braunii HOM05D005358 ORTHO05D006384 2.7e-56 223.0 168 67.9
EL10Ac1g01011 Beta vulgaris HOM05D005358 ORTHO05D006384 4.3e-54 215.7 271 51.7
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 2.0e-43 180.3 234 51.3
CDE06G0290 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 2.2e-42 176.8 124 71.0
Actinidia29466 Actinidia chinensis HOM05D005358 ORTHO05D006384 1.4e-39 167.5 149 63.8
EL10Ac5g12375 Beta vulgaris HOM05D005358 ORTHO05D006384 1.1e-38 164.5 96 81.2
Cre01.g016600 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 5.7e-38 162.2 188 51.1
Cre01.g016750 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 5.7e-38 162.2 188 51.1
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 8.0e-24 115.2 109 65.1
FAN08G1189 Fragaria x ananassa HOM05D005358 ORTHO05D006384 4.1e-20 102.8 81 70.4
Cre03.g146147 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 2.4e-12 77.0 179 32.4
PRCOL_00001561 Prasinoderma coloniale HOM05D005358 ORTHO05D006384 1.3e-10 71.2 175 29.7
MELO3C030542.2 Cucumis melo HOM05D005358 ORTHO05D006384 4.3e-09 66.2 38 78.9
MELO3C031367.2 Cucumis melo HOM05D005358 ORTHO05D006384 2.1e-08 63.9 38 78.9
MCO14G314 Micromonas commoda HOM05D005358 ORTHO05D006384 1.4e-07 61.2 60 50.0
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 8.9e-07 58.5 114 46.5


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