Gene: Pp3c20_23430

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_23430
  • Transcript Identifier Pp3c20_23430V3.1
  • Gene Type Coding gene
  • Location Chr20 : 15174728-15175973 : positive

Gene Family Information

  • ID HOM05D005358
  • #Genes/#Species 142/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_23430V3.1
  • pacid 32946746
  • alias Phypa_146248
  • alias Phpat.020G085600
  • alias Pp1s241_86V6
  • uniprot A9TJ15

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010196
IEA
GOA Databasenonphotochemical quenching
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light Os04g0690800
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light Os04g0690800
GO:0010027
IEA
GOA Databasethylakoid membrane organization
GO:0009644
IEA
GOA Databaseresponse to high light intensity
GO:0080167
IEA
GOA Databaseresponse to karrikin

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016168
ISO
PLAZA Integrative Orthologychlorophyll binding AT1G44575
GO:0051738
ISO
PLAZA Integrative Orthologyxanthophyll binding AT1G44575
GO:0019904
IEA
GOA Databaseprotein domain specific binding
GO:0003729
IEA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009517
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II AT1G44575
GO:0009534
IEA
GOA Databasechloroplast thylakoid
GO:0009579
IEA
GOA Databasethylakoid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0009535
IBA
IEA
GOA Databasechloroplast thylakoid membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023329 Chlorophyll a/b binding domain superfamily
IPR022796 Chlorophyll A-B binding protein
Mapman id Description
1.1.1.5.3.1.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.pH-sensor protein (PsbS)