Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 0.0e+00 1700.3 1016 100.0
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 0.0e+00 1122.8 1018 67.8
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 0.0e+00 1085.9 1018 67.5
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 3.8e-308 1061.6 1018 67.1
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 6.6e-305 1050.8 1024 65.6
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.1e-286 990.3 1022 62.4
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 1.0e-284 983.8 1021 62.7
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.0e-281 973.8 1063 59.8
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 3.3e-280 968.8 1025 61.2
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.6e-279 966.5 1018 62.4
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 4.8e-279 964.9 1086 58.3
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 4.6e-274 948.3 1073 57.6
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 3.3e-272 942.2 1045 59.3
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 7.4e-272 941.0 1039 59.4
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 3.1e-270 935.6 1017 60.9
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 2.0e-269 932.9 1021 61.2
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 3.4e-269 932.2 1037 58.8
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.9e-267 926.4 1026 59.3
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.9e-267 926.4 1062 57.1
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 7.2e-267 924.5 1025 59.7
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.5e-264 916.8 1087 57.0
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 1.5e-264 916.8 1052 58.1
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.4e-264 915.2 1025 58.9
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 2.2e-263 912.9 1022 58.6
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 4.8e-263 911.8 754 72.5
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 6.3e-263 911.4 1039 58.0
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.4e-262 910.2 1079 57.0
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 9.1e-262 907.5 1091 56.4
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 3.5e-261 905.6 1048 57.4
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 3.5e-261 905.6 1039 58.6
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 2.2e-260 902.9 1041 57.7
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 3.2e-259 899.0 1097 55.9
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 7.2e-259 897.9 1031 56.7
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 7.2e-259 897.9 1044 57.9
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 2.1e-258 896.3 1041 57.1
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 1.0e-257 894.0 1019 58.9
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 4.0e-257 892.1 1008 59.5
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 5.2e-257 891.7 1028 58.1
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 8.8e-257 891.0 1084 56.1
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 8.8e-257 891.0 1026 58.6
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.2e-256 890.6 1008 59.1
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 5.7e-256 888.3 1015 57.8
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 9.7e-256 887.5 1031 57.8
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 2.2e-255 886.3 1040 56.9
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 2.8e-255 885.9 1016 57.3
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.1e-254 884.0 1016 58.0
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.4e-254 883.6 1058 56.4
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 5.3e-254 881.7 1008 58.6
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 9.1e-254 880.9 1035 56.4
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 2.7e-253 879.4 1020 58.3
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 3.5e-253 879.0 1091 55.5
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 3.5e-253 879.0 1038 57.0
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.5e-253 878.6 1027 57.7
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 4.5e-253 878.6 1060 56.0
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 5.9e-253 878.2 1040 56.1
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 1.7e-252 876.7 1018 58.7
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 6.5e-252 874.8 1064 55.5
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 2.5e-251 872.8 1018 57.7
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 4.2e-251 872.1 1027 57.4
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.7e-250 868.6 1056 56.0
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.3e-249 866.3 1030 56.8
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 3.0e-249 865.9 1021 57.5
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 8.8e-249 864.4 1037 55.6
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 1.5e-248 863.6 1026 56.4
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.3e-247 860.5 1054 58.0
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 1.7e-247 860.1 1032 55.4
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 2.8e-247 859.4 1021 58.1
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 3.7e-247 859.0 1011 57.4
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 6.3e-247 858.2 1035 55.6
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.8e-246 856.7 1035 55.5
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.1e-246 855.9 1047 55.3
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.1e-246 855.5 1052 56.4
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.4e-246 855.1 1023 56.4
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 1.2e-245 854.0 1019 57.6
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 5.9e-245 851.7 1034 55.5
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 7.7e-245 851.3 1013 55.7
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.7e-244 850.1 1030 55.0
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 2.5e-243 846.3 1199 50.8
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 3.2e-243 845.9 1018 55.3
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 5.5e-243 845.1 1009 58.0
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.2e-242 844.0 1022 57.0
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 2.8e-242 842.8 1067 55.4
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 4.0e-241 839.0 1025 55.5
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 4.0e-241 839.0 1078 53.8
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 6.8e-241 838.2 1070 56.2
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 1.2e-240 837.4 1039 56.5
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 6.3e-239 831.6 1037 53.9
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 8.3e-239 831.2 1019 56.8
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 8.3e-239 831.2 1022 55.4
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 1.4e-238 830.5 1061 54.8
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 2.4e-238 829.7 1073 53.8
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 4.1e-238 828.9 1025 54.7
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 3.5e-237 825.9 1014 55.2
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 3.5e-237 825.9 1029 55.1
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.1e-235 820.8 1038 54.4
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 7.3e-235 818.1 1057 53.6
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 9.5e-235 817.8 1057 53.2
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 1.6e-234 817.0 1179 49.1
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 2.1e-234 816.6 1050 55.1
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 2.0e-232 810.1 1021 54.1
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 1.3e-231 807.4 1037 54.4
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.2e-231 806.6 1032 53.7
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 3.7e-231 805.8 1017 54.1
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 5.0e-228 795.4 1197 48.0
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 5.6e-227 792.0 1038 55.1
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 2.3e-225 786.6 1061 52.6
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 5.2e-225 785.4 1067 51.2
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 9.2e-222 774.6 1017 53.7
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.7e-220 770.4 1044 52.1
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 6.6e-220 768.5 1038 52.1
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.6e-219 765.4 1018 52.9
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 7.3e-219 765.0 1026 52.8
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 1.5e-216 757.3 1045 51.6
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 3.1e-209 733.0 1040 51.9
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 1.9e-206 723.8 1069 48.3
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 2.1e-202 710.3 1052 51.0
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.3e-199 701.0 1075 47.6
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 2.0e-184 650.6 1028 48.7
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 3.9e-180 636.3 1106 43.2
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 1.3e-172 611.3 481 74.4
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 4.6e-165 586.3 1029 46.1
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 3.0e-164 583.6 943 46.3
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.7e-162 577.8 1042 42.4
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.0e-152 544.3 817 49.1
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 1.5e-147 528.1 546 62.1
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.2e-141 508.4 710 50.1
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 3.5e-136 490.3 746 47.9
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 4.0e-108 397.1 391 62.4
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 6.6e-103 379.8 1068 33.6
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 1.2e-85 322.4 555 44.5
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 1.9e-73 282.0 471 45.0
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 6.0e-56 223.8 296 54.4
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 1.2e-51 209.5 346 45.4
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 2.1e-48 198.7 189 65.1
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 7.9e-48 196.8 404 40.1
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 7.9e-48 196.8 137 81.0
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 5.1e-47 194.1 202 59.4
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 4.3e-46 191.0 336 43.5
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 1.4e-41 176.0 749 31.2
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.5e-35 154.5 243 48.1
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 4.5e-35 154.5 362 34.5
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 9.4e-33 146.7 120 74.2
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 4.4e-30 137.9 533 31.9
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 9.7e-30 136.7 172 54.1
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 3.7e-29 134.8 106 74.5
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 2.6e-27 128.6 554 30.5
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 5.9e-27 127.5 87 79.3
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 7.7e-27 127.1 104 68.3
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 1.7e-26 125.9 121 60.3
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.8e-26 124.8 611 27.3
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.5e-25 120.9 91 74.7
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 4.7e-24 117.9 692 25.4
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 4.7e-24 117.9 111 62.2
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.8e-23 115.9 359 32.6
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 8.8e-23 113.6 99 68.7
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.7e-21 109.4 89 74.2
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 1.8e-20 105.9 84 69.0
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.4e-20 105.5 117 55.6
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 3.1e-20 105.1 63 88.9
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 5.3e-20 104.4 160 47.5
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 7.0e-20 104.0 489 28.8
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 2.0e-19 102.4 413 31.2
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 1.0e-18 100.1 244 38.1
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 8.5e-18 97.1 176 43.8
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 2.7e-16 92.0 77 67.5
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.0e-15 90.1 97 59.8
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 1.0e-15 90.1 493 28.4
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 4.0e-15 88.2 60 81.7
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 8.8e-15 87.0 71 74.6
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 4.4e-14 84.7 66 71.2
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 8.3e-13 80.5 65 70.8
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 8.3e-13 80.5 65 70.8
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 1.6e-11 76.3 146 43.2
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 5.0e-10 71.2 61 67.2
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 1.5e-09 69.7 62 67.7
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 1.9e-09 69.3 79 55.7
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 7.2e-09 67.4 45 77.8
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 4.7e-08 64.7 101 45.5
EL10Ac6g13433 Beta vulgaris HOM05D000200 ORTHO05D000262 1.0e-07 63.5 37 81.1
MBI19_g34543_MAGBIO Magnolia biondii HOM05D003521 ORTHO05D000476 2.3e-07 62.4 43 74.4
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 8.9e-07 60.5 61 60.7


User provided reference genes

Program Settings