Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 2.3e-173 612.1 302 100.0
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 1.1e-114 417.2 325 66.8
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 1.3e-107 393.7 346 61.6
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 7.7e-100 367.9 333 57.1
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 1.2e-97 360.5 334 58.1
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 1.3e-94 350.5 314 58.3
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 5.9e-92 341.7 323 56.0
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 1.4e-88 330.5 321 55.1
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 8.8e-88 327.8 321 54.5
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 4.0e-80 302.4 333 51.1
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 6.8e-80 301.6 316 52.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 4.4e-79 298.9 319 49.8
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 7.5e-79 298.1 339 50.1
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 9.8e-79 297.7 320 50.6
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.3e-78 297.4 313 50.8
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 1.7e-78 297.0 317 49.2
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 8.3e-78 294.7 311 50.8
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 8.3e-78 294.7 319 51.1
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 3.2e-77 292.7 323 50.2
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 4.1e-77 292.4 317 51.1
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 9.2e-77 291.2 315 50.8
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.0e-76 290.0 311 50.2
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 1.0e-75 287.7 311 50.2
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 1.3e-75 287.3 317 49.5
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.3e-75 287.3 319 48.9
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 2.9e-75 286.2 315 47.9
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 8.6e-75 284.6 316 48.4
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 1.9e-74 283.5 312 50.6
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 2.5e-74 283.1 314 50.3
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 3.3e-74 282.7 315 48.6
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 5.6e-74 282.0 309 48.5
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 7.3e-74 281.6 319 48.6
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 9.5e-74 281.2 317 49.5
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.8e-73 279.6 314 48.4
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.8e-73 279.6 341 49.3
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.4e-72 277.3 316 49.7
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.4e-72 277.3 316 46.8
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 2.3e-72 276.6 337 45.4
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 5.2e-72 275.4 317 48.3
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.2e-72 275.4 315 50.2
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 8.9e-72 274.6 313 48.6
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 1.5e-71 273.9 312 49.0
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 2.6e-71 273.1 316 46.5
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 4.4e-71 272.3 317 47.6
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 9.8e-71 271.2 312 48.1
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 2.2e-70 270.0 313 48.2
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 2.9e-70 269.6 312 47.8
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 3.7e-70 269.2 316 48.1
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 4.9e-70 268.9 315 46.3
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.2e-69 266.2 316 47.8
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 1.6e-68 263.8 309 46.0
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 3.5e-68 262.7 315 45.1
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 4.6e-68 262.3 314 45.2
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 6.0e-68 261.9 316 44.0
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 1.7e-67 260.4 316 44.6
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 3.0e-67 259.6 343 43.1
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 3.9e-67 259.2 330 43.6
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.1e-66 257.7 362 39.8
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.9e-66 256.9 190 65.3
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 1.6e-65 253.8 326 44.2
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 2.1e-65 253.4 263 52.9
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 4.7e-65 252.3 327 46.2
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 2.3e-64 250.0 304 47.7
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 3.1e-64 249.6 314 44.9
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.0e-64 249.2 314 44.6
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 5.2e-64 248.8 314 44.6
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.2e-64 248.8 314 44.6
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 8.9e-64 248.1 315 44.4
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 1.2e-63 247.7 314 46.2
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 1.5e-63 247.3 315 45.4
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 4.4e-63 245.7 314 44.9
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 9.8e-63 244.6 312 43.3
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.7e-62 242.7 314 43.9
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 3.7e-62 242.7 310 45.5
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 4.9e-62 242.3 270 50.0
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.9e-61 240.4 304 46.7
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 2.5e-58 229.9 321 42.7
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 7.3e-58 228.4 315 43.8
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 7.3e-58 228.4 323 42.7
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 4.7e-57 225.7 189 57.1
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 6.2e-57 225.3 189 57.1
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 1.1e-56 224.6 330 43.6
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 1.2e-55 221.1 313 44.1
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 1.3e-54 217.6 332 41.9
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 2.9e-54 216.5 191 53.4
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.1e-53 214.5 288 44.1
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 2.4e-53 213.4 280 45.7
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 2.4e-53 213.4 250 46.8
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 3.2e-53 213.0 196 54.1
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 4.1e-53 212.6 309 42.1
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 2.1e-52 210.3 305 43.3
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 2.7e-52 209.9 309 43.0
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 1.3e-51 207.6 308 40.3
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 8.6e-51 204.9 257 45.1
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 8.6e-51 204.9 257 45.1
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 1.1e-50 204.5 257 45.1
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 1.9e-50 203.8 307 41.7
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 4.3e-50 202.6 259 42.5
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 4.3e-50 202.6 187 56.1
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 1.2e-49 201.1 196 53.1
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 1.6e-49 200.7 247 44.9
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 3.6e-49 199.5 271 45.8
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 4.7e-49 199.1 304 41.4
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 1.3e-46 191.0 282 41.1
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 3.2e-45 186.4 191 50.8
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 4.8e-41 172.6 145 57.9
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 6.2e-41 172.2 241 40.7
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 9.0e-40 168.3 232 40.5
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 1.2e-39 167.9 173 50.9
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 2.6e-39 166.8 225 42.2
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 3.8e-38 162.9 194 42.8
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 2.1e-36 157.1 255 36.1
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.0e-36 155.6 194 41.8
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 1.7e-35 154.1 124 58.9
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 2.3e-35 153.7 193 40.9
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.3e-34 149.8 194 40.7
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.5e-31 141.0 124 54.8
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 4.2e-29 132.9 203 40.4
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 2.3e-27 127.1 193 40.9
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 3.3e-26 123.2 97 52.6
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.6e-23 113.6 203 37.4
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 2.5e-21 107.1 185 36.2
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 5.7e-18 95.9 71 66.2
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 7.6e-15 85.5 228 31.6
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 5.7e-10 69.3 55 63.6


User provided reference genes

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