Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G7034 Salvia bowleyana HOM05D005082 ORTHO05D050782 3.7e-57 224.6 106 100.0
Aa31LG1G17860 Aethionema arabicum HOM05D005082 ORTHO05D006474 5.1e-14 81.3 71 56.3
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 6.6e-14 80.9 78 53.8
Dinv14185 Davidia involucrata HOM05D005082 ORTHO05D006474 8.6e-14 80.5 74 50.0
Lj5C170T16 Lonicera japonica HOM05D005082 ORTHO05D006474 1.9e-13 79.3 47 76.6
QL04p064927 Quercus lobata HOM05D005082 ORTHO05D006474 1.9e-13 79.3 82 51.2
QL11p056821 Quercus lobata HOM05D005082 ORTHO05D006474 1.9e-13 79.3 82 51.2
Zm00001eb428990 Zea mays HOM05D005082 ORTHO05D050782 1.9e-13 79.3 67 59.7
FAN27G0598 Fragaria x ananassa HOM05D005082 ORTHO05D006474 3.3e-13 78.6 71 53.5
MD05G1011800 Malus domestica HOM05D005082 ORTHO05D006474 3.3e-13 78.6 71 54.9
Atru.BG.54.p Acer truncatum HOM05D005082 ORTHO05D006474 4.3e-13 78.2 85 47.1
Atru.chr5.3580 Acer truncatum HOM05D005082 ORTHO05D006474 4.3e-13 78.2 85 47.1
Glyma.03G097900 Glycine max HOM05D005082 ORTHO05D006474 4.3e-13 78.2 70 57.1
TWI59G1375 Tripterygium wilfordii HOM05D005082 ORTHO05D006474 4.3e-13 78.2 71 53.5
ATR0605G166 Amborella trichopoda HOM05D005082 ORTHO05D006474 5.6e-13 77.8 85 45.9
AL8G41310 Arabidopsis lyrata HOM05D005082 ORTHO05D006474 5.6e-13 77.8 41 85.4
AT5G64050 Arabidopsis thaliana HOM05D005082 ORTHO05D006474 5.6e-13 77.8 41 85.4
Carub.0008s2483 Capsella rubella HOM05D005082 ORTHO05D006474 5.6e-13 77.8 41 85.4
CARHR277960 Cardamine hirsuta HOM05D005082 ORTHO05D006474 5.6e-13 77.8 41 85.4
Cfa005396 Carpinus fangiana HOM05D005082 ORTHO05D006474 5.6e-13 77.8 83 50.6
AUR62013197 Chenopodium quinoa HOM05D005082 ORTHO05D006474 5.6e-13 77.8 71 54.9
Thhalv10003868m.g Eutrema salsugineum HOM05D005082 ORTHO05D006474 5.6e-13 77.8 41 85.4
SalBow1G4726 Salvia bowleyana HOM05D005082 ORTHO05D006474 5.6e-13 77.8 71 56.3
Sp2g27120 Schrenkiella parvula HOM05D005082 ORTHO05D006474 5.6e-13 77.8 41 85.4
THA.LOC104800058 Tarenaya hassleriana HOM05D005082 ORTHO05D006474 5.6e-13 77.8 41 85.4
GSVIVG01023855001 Vitis vinifera HOM05D005082 ORTHO05D006474 5.6e-13 77.8 85 47.1
Actinidia20586 Actinidia chinensis HOM05D005082 ORTHO05D006474 7.3e-13 77.4 71 56.3
BraA06t26018Z Brassica rapa HOM05D005082 ORTHO05D006474 7.3e-13 77.4 45 80.0
Glyma.07G124000 Glycine max HOM05D005082 ORTHO05D006474 7.3e-13 77.4 70 57.1
Lj9C409G5 Lonicera japonica HOM05D005082 ORTHO05D006474 7.3e-13 77.4 41 82.9
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 7.3e-13 77.4 41 82.9
ClCG02G003240 Citrullus lanatus HOM05D005082 ORTHO05D006474 9.5e-13 77.0 71 53.5
Dinv41859 Davidia involucrata HOM05D005082 ORTHO05D006474 9.5e-13 77.0 74 55.4
FvH4_2g14910 Fragaria vesca HOM05D005082 ORTHO05D006474 9.5e-13 77.0 71 53.5
FAN15G2332 Fragaria x ananassa HOM05D005082 ORTHO05D006474 9.5e-13 77.0 71 53.5
FAN20G1299 Fragaria x ananassa HOM05D005082 ORTHO05D006474 9.5e-13 77.0 71 53.5
FAN24G2999 Fragaria x ananassa HOM05D005082 ORTHO05D006474 9.5e-13 77.0 71 53.5
VMungo0331G1808 Vigna mungo HOM05D005082 ORTHO05D006474 9.5e-13 77.0 81 51.9
Haze_01956 Corylus avellana HOM05D005082 ORTHO05D006474 1.2e-12 76.6 82 50.0
Manes.02G091600 Manihot esculenta HOM05D005082 ORTHO05D006474 1.2e-12 76.6 82 48.8
Phvul.010G038400 Phaseolus vulgaris HOM05D005082 ORTHO05D006474 1.2e-12 76.6 81 51.9
Prupe.8G016800 Prunus persica HOM05D005082 ORTHO05D006474 1.2e-12 76.6 71 53.5
CiPaw.05G095000 Carya illinoinensis HOM05D005082 ORTHO05D006474 1.6e-12 76.3 71 53.5
AUR62010207 Chenopodium quinoa HOM05D005082 ORTHO05D006474 1.6e-12 76.3 71 53.5
CsaV3_7G002150 Cucumis sativus L. HOM05D005082 ORTHO05D006474 1.6e-12 76.3 71 53.5
PGR042G3506 Punica granatum HOM05D005082 ORTHO05D006474 1.6e-12 76.3 70 54.3
TAR628G0288 Trochodendron aralioides HOM05D005082 ORTHO05D006474 1.6e-12 76.3 82 50.0
COL.COLO4_03850 Corchorus olitorius HOM05D005082 ORTHO05D006474 2.1e-12 75.9 82 50.0
MELO3C015693.2 Cucumis melo HOM05D005082 ORTHO05D006474 2.1e-12 75.9 71 52.1
DCAR_001519 Daucus carota HOM05D005082 ORTHO05D006474 2.1e-12 75.9 71 53.5
ECA233G3220 Erigeron canadensis HOM05D005082 ORTHO05D006474 2.1e-12 75.9 82 48.8
Oeu006114.1 Olea europaea HOM05D005082 ORTHO05D006474 2.1e-12 75.9 85 47.1
PSO210G0895 Papaver somniferum HOM05D005082 ORTHO05D006474 2.1e-12 75.9 71 52.1
PSO675G0919 Papaver somniferum HOM05D005082 ORTHO05D006474 2.1e-12 75.9 71 52.1
Eucgr.H05005 Eucalyptus grandis HOM05D005082 ORTHO05D006474 2.8e-12 75.5 82 47.6
HanXRQChr14g0455171 Helianthus annuus HOM05D005082 ORTHO05D006474 2.8e-12 75.5 82 48.8
MD10G1011800 Malus domestica HOM05D005082 ORTHO05D006474 2.8e-12 75.5 41 82.9
Sc08g0002050 Simmondsia chinensis HOM05D005082 ORTHO05D006474 2.8e-12 75.5 82 48.8
Duzib248G1564 Durio zibethinus HOM05D005082 ORTHO05D006474 3.6e-12 75.1 82 48.8
Duzib132G0508 Durio zibethinus HOM05D005082 ORTHO05D006474 4.7e-12 74.7 45 75.6
Potri.009G169700 Populus trichocarpa HOM05D005082 ORTHO05D006474 4.7e-12 74.7 85 44.7
SEGI_01300 Sequoiadendron giganteum HOM05D005082 ORTHO05D006474 4.7e-12 74.7 103 42.7
Solyc01g112290.4 Solanum lycopersicum HOM05D005082 ORTHO05D006474 4.7e-12 74.7 70 52.9
CSS0015047 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 6.2e-12 74.3 41 80.5
Thecc.02G148100 Theobroma cacao HOM05D005082 ORTHO05D006474 6.2e-12 74.3 82 47.6
BcaB02g09792 Brassica carinata HOM05D005082 ORTHO05D006474 8.1e-12 73.9 41 82.9
BcaC01g02661 Brassica carinata HOM05D005082 ORTHO05D006474 8.1e-12 73.9 41 82.9
A06p30760 Brassica napus HOM05D005082 ORTHO05D006474 8.1e-12 73.9 41 82.9
C03p62220 Brassica napus HOM05D005082 ORTHO05D006474 8.1e-12 73.9 41 82.9
BolC3t18485H Brassica oleracea HOM05D005082 ORTHO05D006474 8.1e-12 73.9 41 82.9
DCAR_006224 Daucus carota HOM05D005082 ORTHO05D006474 8.1e-12 73.9 71 50.7
Gorai.002G014600 Gossypium raimondii HOM05D005082 ORTHO05D006474 8.1e-12 73.9 71 52.1
Os02g0121000 Oryza sativa ssp. japonica HOM05D005082 ORTHO05D006474 8.1e-12 73.9 71 50.7
Sopen01g054400 Solanum pennellii HOM05D005082 ORTHO05D006474 8.1e-12 73.9 70 52.9
Ah.01g017700 Amaranthus hybridus HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Aqoxy6G02995 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 1.1e-11 73.6 71 52.1
EL10Ac9g21557 Beta vulgaris HOM05D005082 ORTHO05D006474 1.1e-11 73.6 71 50.7
Ca_25889_v3 Cicer arietinum L. HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Ciclev10028098m.g Citrus clementina HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Migut.B00003 Erythranthe guttata HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Lj3g0023171 Lotus japonicus HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Medtr8g009900 Medicago truncatula HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Nitab4.5_0001220g0040 Nicotiana tabacum HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Peaxi162Scf00362g00137 Petunia axillaris HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
RcHm_v2.0_Chr6g0277491 Rosa chinensis HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Sed0020521 Sechium edule HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
Hund06352 Selenicereus undatus HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
TPR.G17355 Trifolium pratense HOM05D005082 ORTHO05D006474 1.1e-11 73.6 41 80.5
CDE06G2564 Ceratophyllum demersum HOM05D005082 ORTHO05D006474 1.4e-11 73.2 71 49.3
Gohir.A01G011600 Gossypium hirsutum HOM05D005082 ORTHO05D006474 1.8e-11 72.8 71 50.7
Gohir.D01G012800 Gossypium hirsutum HOM05D005082 ORTHO05D006474 1.8e-11 72.8 41 80.5
RcHm_v2.0_Chr2g0162471 Rosa chinensis HOM05D005082 ORTHO05D006474 1.8e-11 72.8 41 78.0
Sabra04G0140300 Salix brachista HOM05D005082 ORTHO05D006474 1.8e-11 72.8 41 80.5
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 1.8e-11 72.8 74 50.0
Lsat_1_v5_gn_8_119500 Lactuca sativa HOM05D005082 ORTHO05D006474 2.3e-11 72.4 41 78.0
MSTRG.16959 Avicennia marina HOM05D005082 ORTHO05D006474 3.1e-11 72.0 41 78.0
CAN.G1645.8 Capsicum annuum HOM05D005082 ORTHO05D006474 3.1e-11 72.0 41 78.0
Cc09_g10910 Coffea canephora HOM05D005082 ORTHO05D006474 3.1e-11 72.0 41 78.0
arahy.Tifrunner.gnm1.ann1.44ERQ5 Arachis hypogaea HOM05D005082 ORTHO05D006474 4.0e-11 71.6 41 78.0
arahy.Tifrunner.gnm1.ann1.M18VWQ Arachis hypogaea HOM05D005082 ORTHO05D006474 4.0e-11 71.6 41 78.0
MBI01_g28404_MAGBIO Magnolia biondii HOM05D005082 ORTHO05D006474 4.0e-11 71.6 71 49.3
Rhsim04G0008200 Rhododendron simsii HOM05D005082 ORTHO05D006474 4.0e-11 71.6 41 78.0
Cpa.g.c29182.1 Carica papaya HOM05D005082 ORTHO05D006474 5.2e-11 71.2 70 52.9
Lalb_Chr07g0194811 Lupinus albus HOM05D005082 ORTHO05D006474 5.2e-11 71.2 41 78.0
Sed0003916 Sechium edule HOM05D005082 ORTHO05D006474 5.2e-11 71.2 41 78.0
vmacro16288 Vaccinium macrocarpon HOM05D005082 ORTHO05D006474 5.2e-11 71.2 41 75.6
Lalb_Chr12g0210191 Lupinus albus HOM05D005082 ORTHO05D006474 6.8e-11 70.9 41 78.0
Cre07.g313700 Chlamydomonas reinhardtii HOM05D005082 ORTHO05D006474 4.4e-10 68.2 100 37.0
AagrBONN_evm.TU.Sc2ySwM_117.3203 Anthoceros agrestis HOM05D005082 ORTHO05D006474 6.4e-09 64.3 41 70.7
Pp3c1_10010 Physcomitrium patens HOM05D005082 ORTHO05D006474 6.4e-09 64.3 41 70.7
MCO11G616 Micromonas commoda HOM05D005082 ORTHO05D006474 8.4e-09 63.9 83 42.2
Mapoly0005s0181 Marchantia polymorpha HOM05D005082 ORTHO05D006474 1.4e-08 63.2 41 68.3
PRCOL_00001874 Prasinoderma coloniale HOM05D005082 ORTHO05D006474 4.1e-08 61.6 40 62.5
CBR_g25940 Chara braunii HOM05D005082 ORTHO05D006474 1.6e-07 59.7 41 61.0
MSTRG.11123 Avicennia marina HOM05D000058 ORTHO05D000255 7.8e-07 57.4 38 57.9
SMO134G0063 Selaginella moellendorffii HOM05D005082 ORTHO05D006474 7.8e-07 57.4 40 60.0
MSTRG.20228 Avicennia marina HOM05D000058 ORTHO05D013992 1.7e-06 56.2 38 57.9
Migut.B00457 Erythranthe guttata HOM05D000058 ORTHO05D000255 1.7e-06 56.2 38 57.9
Migut.B00458 Erythranthe guttata HOM05D000058 ORTHO05D000255 1.7e-06 56.2 38 57.9
Duzib052G0849 Durio zibethinus HOM05D005082 ORTHO05D006474 2.3e-06 55.8 36 69.4
SalBow6G4186 Salvia bowleyana HOM05D000058 ORTHO05D000255 3.0e-06 55.5 36 63.9
SGA_v2.0_scaffold225G43058 Striga asiatica HOM05D000058 ORTHO05D000255 5.1e-06 54.7 38 55.3
SGA_v2.0_scaffold225G43057 Striga asiatica HOM05D000058 ORTHO05D000255 6.6e-06 54.3 36 61.1
Oeu045052.1 Olea europaea HOM05D000058 ORTHO05D000255 8.6e-06 53.9 35 62.9


User provided reference genes

Program Settings