Gene: SGA_v2.0_scaffold5G02667
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold5G02667
- Transcript Identifier SGA_v2.0_scaffold5T02667
- Gene Type Coding gene
- Location scaffold5 : 811589-821129 : negative
Gene Family Information
- ID HOM05D005082
- #Genes/#Species 147/95
- Phylogenetic origin
- ID ORTHO05D006474
- #Genes/#Species 142/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Glutamate--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006260 | IEA | InterPro | DNA replication | |
GO:0007005 | ISO | PLAZA Integrative Orthology | mitochondrion organization | AT5G64050 |
GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G64050 |
GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G64050 |
GO:0006424 | IEA | InterPro | glutamyl-tRNA aminoacylation | |
GO:0043039 | IEA | InterPro | tRNA aminoacylation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G64050 |
GO:0000049 | IEA | InterPro | tRNA binding | |
GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0004818 | IEA | InterPro | glutamate-tRNA ligase activity | |
GO:0000166 | IEA | InterPro | nucleotide binding | |
GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G64050 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G64050 |
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G64050 |
GO:0000811 | IEA | InterPro | GINS complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR021151 | GINS subunit, domain A |
IPR020058 | Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain |
IPR004527 | Glutamate-tRNA ligase, bacterial/mitochondrial |
IPR020751 | Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 |
IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
IPR033910 | Glutamyl-tRNA synthetase |
IPR036224 | GINS, helical bundle-like domain superfamily |
IPR000924 | Glutamyl/glutaminyl-tRNA synthetase |
IPR005339 | GINS complex, subunit Psf1 |
IPR008925 | Aminoacyl-tRNA synthetase, class I, anticodon-binding |
Mapman id | Description |
---|---|
13.2.2.5.1 | Cell cycle organisation.DNA replication.initiation.GINS DNA replication fork maintenance complex.component PSF1 |
17.2.7 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase |
7.12.1.1 | Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA synthetase (GluRS) |