Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1464 Salvia bowleyana HOM05D004755 ORTHO05D006137 1.9e-104 382.5 186 100.0
Migut.B00268 Erythranthe guttata HOM05D004755 ORTHO05D006137 6.0e-79 297.7 162 84.0
SGA_v2.0_scaffold58G20570 Striga asiatica HOM05D004755 ORTHO05D006137 1.8e-78 296.2 162 81.5
Oeu010556.1 Olea europaea HOM05D004755 ORTHO05D006137 7.4e-77 290.8 210 67.6
Hma1.2p1_0066F.1_g036750 Hydrangea macrophylla HOM05D004755 ORTHO05D006137 2.8e-76 288.9 161 81.4
Nitab4.5_0004280g0140 Nicotiana tabacum HOM05D004755 ORTHO05D006137 3.7e-76 288.5 171 77.8
Dinv23556 Davidia involucrata HOM05D004755 ORTHO05D006137 4.8e-76 288.1 163 79.8
Lj5A201G28 Lonicera japonica HOM05D004755 ORTHO05D006137 6.2e-76 287.7 160 83.1
CiPaw.05G060900 Carya illinoinensis HOM05D004755 ORTHO05D006137 2.0e-74 282.7 159 79.9
Gorai.012G146700 Gossypium raimondii HOM05D004755 ORTHO05D006137 2.6e-74 282.3 162 77.2
Cc02_g17900 Coffea canephora HOM05D004755 ORTHO05D006137 4.5e-74 281.6 162 79.0
Gohir.D04G159300 Gossypium hirsutum HOM05D004755 ORTHO05D006137 4.5e-74 281.6 162 77.2
Prupe.8G104600 Prunus persica HOM05D004755 ORTHO05D006137 4.5e-74 281.6 159 79.2
GSVIVG01031913001 Vitis vinifera HOM05D004755 ORTHO05D006137 4.5e-74 281.6 160 80.6
CAN.G322.107 Capsicum annuum HOM05D004755 ORTHO05D006137 5.8e-74 281.2 162 78.4
Duzib132G0528 Durio zibethinus HOM05D004755 ORTHO05D006137 1.0e-73 280.4 161 78.3
Thecc.02G121800 Theobroma cacao HOM05D004755 ORTHO05D006137 1.0e-73 280.4 161 78.3
TWI75G0180 Tripterygium wilfordii HOM05D004755 ORTHO05D006137 1.0e-73 280.4 160 80.0
Actinidia00497 Actinidia chinensis HOM05D004755 ORTHO05D006137 2.2e-73 279.3 162 77.8
MD10G1082200 Malus domestica HOM05D004755 ORTHO05D006137 2.2e-73 279.3 159 80.5
Gohir.A04G117600 Gossypium hirsutum HOM05D004755 ORTHO05D006137 4.9e-73 278.1 162 75.9
Lsat_1_v5_gn_9_109321 Lactuca sativa HOM05D004755 ORTHO05D006137 3.2e-72 275.4 160 76.2
Cfa004975 Carpinus fangiana HOM05D004755 ORTHO05D006137 5.5e-72 274.6 159 78.6
Sopen01g051540 Solanum pennellii HOM05D004755 ORTHO05D006137 5.5e-72 274.6 161 78.3
COL.COLO4_32463 Corchorus olitorius HOM05D004755 ORTHO05D006137 7.1e-72 274.2 159 76.7
Solyc01g109350.3 Solanum lycopersicum HOM05D004755 ORTHO05D006137 9.3e-72 273.9 161 78.3
Manes.17G099000 Manihot esculenta HOM05D004755 ORTHO05D006137 2.7e-71 272.3 161 76.4
HanXRQChr08g0216571 Helianthus annuus HOM05D004755 ORTHO05D006137 1.3e-70 270.0 163 76.7
vmacro02143 Vaccinium macrocarpon HOM05D004755 ORTHO05D006137 1.8e-70 269.6 163 77.9
Rhsim11G0173300 Rhododendron simsii HOM05D004755 ORTHO05D006137 3.9e-70 268.5 161 77.0
RcHm_v2.0_Chr6g0262551 Rosa chinensis HOM05D004755 ORTHO05D006137 3.9e-70 268.5 160 76.9
Glyma.11G120700 Glycine max HOM05D004755 ORTHO05D006137 5.1e-70 268.1 160 76.9
Haze_02419 Corylus avellana HOM05D004755 ORTHO05D006137 6.7e-70 267.7 172 73.8
Ciclev10027868m.g Citrus clementina HOM05D004755 ORTHO05D006137 1.5e-69 266.5 161 75.2
Potri.009G112184 Populus trichocarpa HOM05D004755 ORTHO05D006137 1.9e-69 266.2 162 73.5
Potri.T125104 Populus trichocarpa HOM05D004755 ORTHO05D006137 1.9e-69 266.2 162 73.5
arahy.Tifrunner.gnm1.ann1.A0G0F1 Arachis hypogaea HOM05D004755 ORTHO05D006137 4.3e-69 265.0 159 74.8
ClCG02G005310 Citrullus lanatus HOM05D004755 ORTHO05D006137 4.3e-69 265.0 167 73.7
QL11p042321 Quercus lobata HOM05D004755 ORTHO05D006137 5.7e-69 264.6 159 77.4
arahy.Tifrunner.gnm1.ann1.CRQ4KQ Arachis hypogaea HOM05D004755 ORTHO05D006137 9.7e-69 263.8 159 74.2
ECA240G4701 Erigeron canadensis HOM05D004755 ORTHO05D006137 9.7e-69 263.8 156 75.0
Glyma.12G045800 Glycine max HOM05D004755 ORTHO05D006137 1.3e-68 263.5 160 75.0
FAN15G3513 Fragaria x ananassa HOM05D004755 ORTHO05D006137 2.8e-68 262.3 162 71.0
CSS0003833 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 3.7e-68 261.9 161 74.5
CSS0019785 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 3.7e-68 261.9 161 74.5
FAN20G2502 Fragaria x ananassa HOM05D004755 ORTHO05D006137 3.7e-68 261.9 162 70.4
FvH4_2g08030 Fragaria vesca HOM05D004755 ORTHO05D006137 1.4e-67 260.0 161 70.8
FAN24G1877 Fragaria x ananassa HOM05D004755 ORTHO05D006137 1.4e-67 260.0 161 70.8
Phvul.011G047700 Phaseolus vulgaris HOM05D004755 ORTHO05D006137 1.4e-67 260.0 159 75.5
Nitab4.5_0004287g0030 Nicotiana tabacum HOM05D004755 ORTHO05D006137 1.2e-66 256.9 150 79.3
AL3G32250 Arabidopsis lyrata HOM05D004755 ORTHO05D006137 2.6e-66 255.8 163 69.3
VMungo1127G1904 Vigna mungo HOM05D004755 ORTHO05D006137 4.5e-66 255.0 160 74.4
BraA05t21911Z Brassica rapa HOM05D004755 ORTHO05D006137 5.9e-66 254.6 162 71.0
Sabra04G0100200 Salix brachista HOM05D004755 ORTHO05D006137 5.9e-66 254.6 171 67.3
Sabra09G0085600 Salix brachista HOM05D004755 ORTHO05D006137 5.9e-66 254.6 163 70.6
BolC5t33386H Brassica oleracea HOM05D004755 ORTHO05D006137 1.0e-65 253.8 162 70.4
Carub.0003s1870 Capsella rubella HOM05D004755 ORTHO05D006137 1.0e-65 253.8 162 69.1
THA.LOC104798811 Tarenaya hassleriana HOM05D004755 ORTHO05D006137 1.0e-65 253.8 158 72.2
C05p46570 Brassica napus HOM05D004755 ORTHO05D006137 1.3e-65 253.4 162 70.4
Sed0014712 Sechium edule HOM05D004755 ORTHO05D006137 1.7e-65 253.1 158 74.7
Potri.004G150700 Populus trichocarpa HOM05D004755 ORTHO05D006137 3.8e-65 251.9 162 69.1
AT3G18860 Arabidopsis thaliana HOM05D004755 ORTHO05D006137 5.0e-65 251.5 162 67.9
BcaB06g25940 Brassica carinata HOM05D004755 ORTHO05D006137 5.0e-65 251.5 162 70.4
A05p30690 Brassica napus HOM05D004755 ORTHO05D006137 8.5e-65 250.8 161 70.2
CARHR094310 Cardamine hirsuta HOM05D004755 ORTHO05D006137 1.1e-64 250.4 162 67.3
Hund06220 Selenicereus undatus HOM05D004755 ORTHO05D006137 1.1e-64 250.4 171 63.2
CsaV3_7G010210 Cucumis sativus L. HOM05D004755 ORTHO05D006137 1.9e-64 249.6 159 73.6
Sp3g16960 Schrenkiella parvula HOM05D004755 ORTHO05D006137 1.9e-64 249.6 162 69.8
MELO3C018404.2 Cucumis melo HOM05D004755 ORTHO05D006137 3.2e-64 248.8 159 73.0
Thhalv10020129m.g Eutrema salsugineum HOM05D004755 ORTHO05D006137 4.2e-64 248.4 161 69.6
Lj3g0013592 Lotus japonicus HOM05D004755 ORTHO05D006137 4.2e-64 248.4 160 69.4
Aa31LG8G5700 Aethionema arabicum HOM05D004755 ORTHO05D006137 5.5e-64 248.1 161 68.3
C03p49850 Brassica napus HOM05D004755 ORTHO05D006137 1.6e-63 246.5 162 69.1
Peaxi162Scf00016g01034 Petunia axillaris HOM05D004755 ORTHO05D006137 6.1e-63 244.6 140 79.3
A03p40880 Brassica napus HOM05D004755 ORTHO05D006137 7.9e-63 244.2 162 67.9
BraA03t13246Z Brassica rapa HOM05D004755 ORTHO05D006137 7.9e-63 244.2 162 67.9
Medtr4g069090 Medicago truncatula HOM05D004755 ORTHO05D006137 1.0e-62 243.8 162 69.1
MBI16_g13149_MAGBIO Magnolia biondii HOM05D004755 ORTHO05D006137 2.3e-62 242.7 161 66.5
Psat7g185120 Pisum sativum HOM05D004755 ORTHO05D006137 1.5e-61 240.0 160 68.1
Lalb_Chr03g0025821 Lupinus albus HOM05D004755 ORTHO05D006137 1.7e-60 236.5 143 75.5
TPR.G28052 Trifolium pratense HOM05D004755 ORTHO05D006137 1.7e-60 236.5 161 67.7
unitig_746.g26712 Utricularia gibba HOM05D004755 ORTHO05D006137 2.2e-60 236.1 167 67.1
AUR62011360 Chenopodium quinoa HOM05D004755 ORTHO05D006137 3.7e-60 235.3 156 66.0
AUR62016701 Chenopodium quinoa HOM05D004755 ORTHO05D006137 4.8e-60 235.0 156 65.4
Ca_20846_v3 Cicer arietinum L. HOM05D004755 ORTHO05D006137 4.8e-60 235.0 160 66.9
EL10Ac9g21762 Beta vulgaris HOM05D004755 ORTHO05D006137 6.3e-60 234.6 168 63.1
Lalb_Chr01g0002741 Lupinus albus HOM05D004755 ORTHO05D006137 6.3e-60 234.6 138 78.3
BcaC01g03670 Brassica carinata HOM05D004755 ORTHO05D006137 1.1e-59 233.8 167 64.7
Aqoxy5G01708 Aquilegia oxysepala HOM05D004755 ORTHO05D006137 9.1e-59 230.7 141 70.2
Ah.01g006160 Amaranthus hybridus HOM05D004755 ORTHO05D006137 1.2e-58 230.3 162 63.6
SHI05426 Sapria himalayana HOM05D004755 ORTHO05D006137 1.5e-58 229.9 175 58.9
TAR628G0908 Trochodendron aralioides HOM05D004755 ORTHO05D006137 5.9e-58 228.0 138 72.5
Nn5g29490 Nelumbo nucifera HOM05D004755 ORTHO05D006137 1.9e-56 223.0 146 67.1
BolC3t17278H Brassica oleracea HOM05D004755 ORTHO05D006137 2.1e-55 219.5 221 50.7
Cpa.g.sc62.109 Carica papaya HOM05D004755 ORTHO05D006137 1.4e-54 216.9 130 75.4
PGR142G0564 Punica granatum HOM05D004755 ORTHO05D006137 3.0e-54 215.7 139 70.5
PSO170G5490 Papaver somniferum HOM05D004755 ORTHO05D006137 1.1e-53 213.8 151 62.9
PSO700G0113 Papaver somniferum HOM05D004755 ORTHO05D006137 1.1e-53 213.8 151 62.9
ATR0733G059 Amborella trichopoda HOM05D004755 ORTHO05D006137 1.8e-51 206.5 150 58.0
Os07g0123700 Oryza sativa ssp. japonica HOM05D004755 ORTHO05D006137 3.5e-50 202.2 132 66.7
Zm00001eb299230 Zea mays HOM05D004755 ORTHO05D006137 5.9e-50 201.4 142 60.6
HPP92_001848 Vanilla planifolia HOM05D004755 ORTHO05D006137 1.0e-46 190.7 144 59.0
Mapoly0131s0025 Marchantia polymorpha HOM05D004755 ORTHO05D006137 1.8e-46 189.9 144 56.9
AagrBONN_evm.TU.Sc2ySwM_368.721 Anthoceros agrestis HOM05D004755 ORTHO05D006137 5.3e-43 178.3 144 51.4
SMO146G0209 Selaginella moellendorffii HOM05D004755 ORTHO05D006137 5.5e-40 168.3 163 48.5
AagrBONN_evm.TU.Sc2ySwM_368.805 Anthoceros agrestis HOM05D004755 ORTHO05D006137 2.1e-39 166.4 147 49.7
CBR_g24445 Chara braunii HOM05D004755 ORTHO05D006137 3.0e-38 162.5 136 48.5
SEGI_26304 Sequoiadendron giganteum HOM05D004755 ORTHO05D006137 3.0e-38 162.5 111 59.5
Pp3c13_21390 Physcomitrium patens HOM05D004755 ORTHO05D006137 1.7e-36 156.8 138 51.4
DCAR_022097 Daucus carota HOM05D004755 ORTHO05D006137 2.3e-25 119.8 73 72.6
Atru.chr5.2935 Acer truncatum HOM05D004755 ORTHO05D006137 3.8e-25 119.0 74 73.0
Cre09.g389912 Chlamydomonas reinhardtii HOM05D004755 ORTHO05D006137 5.7e-21 105.1 169 32.5
Eucgr.I01243 Eucalyptus grandis HOM05D004755 ORTHO05D006137 5.7e-21 105.1 72 68.1
MCO13G192 Micromonas commoda HOM05D004755 ORTHO05D006137 4.1e-19 99.0 159 35.8
TAR376G1072 Trochodendron aralioides HOM05D004755 ORTHO05D006137 1.2e-15 87.4 66 63.6
Cfa023312 Carpinus fangiana HOM05D004755 ORTHO05D006137 9.8e-13 77.8 170 28.8
Actinidia22488 Actinidia chinensis HOM05D004755 ORTHO05D056945 2.3e-09 66.6 122 38.5
QL05p061710 Quercus lobata HOM05D010675 ORTHO05D014145 3.9e-09 65.9 46 67.4
QL03p000458 Quercus lobata HOM05D010675 ORTHO05D014145 5.0e-09 65.5 46 67.4
QL09p000200 Quercus lobata HOM05D010675 ORTHO05D014145 5.0e-09 65.5 46 67.4
QL10p016783 Quercus lobata HOM05D010675 ORTHO05D014145 5.0e-09 65.5 46 67.4
FAN07G0204 Fragaria x ananassa HOM05D000453 ORTHO05D000387 3.3e-08 62.8 126 31.0
HanXRQChr04g0100141 Helianthus annuus HOM05D000453 ORTHO05D000387 7.3e-08 61.6 129 28.7
CSS0012027 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D014145 1.2e-07 60.8 35 80.0
Sc18g0004710 Simmondsia chinensis HOM05D004755 ORTHO05D006137 1.2e-07 60.8 36 69.4
TPR.G17575 Trifolium pratense HOM05D001335 ORTHO05D001184 1.2e-07 60.8 114 31.6
BcaB07g33726 Brassica carinata HOM05D002288 ORTHO05D002894 1.6e-07 60.5 107 33.6
Ca_28149_v3 Cicer arietinum L. HOM05D000453 ORTHO05D000387 2.8e-07 59.7 186 25.8
Ca_30673_v3 Cicer arietinum L. HOM05D000453 ORTHO05D000387 2.8e-07 59.7 186 25.8
Cfa026942 Carpinus fangiana HOM05D068281 ORTHO05D043697 6.2e-07 58.5 115 33.0
SEGI_07035 Sequoiadendron giganteum HOM05D004755 ORTHO05D014145 6.2e-07 58.5 36 63.9
GSVIVG01032921001 Vitis vinifera HOM05D005508 ORTHO05D006882 1.8e-06 57.0 170 25.9
SGA_v2.0_scaffold612G53192 Striga asiatica HOM05D003769 ORTHO05D004521 2.3e-06 56.6 132 25.0
BcaC05g27559 Brassica carinata HOM05D002288 ORTHO05D002894 3.1e-06 56.2 105 32.4
CAN.G572.59 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-06 56.2 40 65.0
CBR_g54314 Chara braunii HOM05D005151 ORTHO05D006322 3.1e-06 56.2 78 35.9
FAN12G3656 Fragaria x ananassa HOM05D000453 ORTHO05D000387 4.0e-06 55.8 126 31.7
MSTRG.4561 Avicennia marina HOM05D002288 ORTHO05D002894 5.2e-06 55.5 118 29.7
PSO017G1990 Papaver somniferum HOM05D003769 ORTHO05D004521 5.2e-06 55.5 155 26.5
SEGI_15664 Sequoiadendron giganteum HOM05D003769 ORTHO05D004521 5.2e-06 55.5 125 32.8
PSO478G4026 Papaver somniferum HOM05D003769 ORTHO05D004521 6.8e-06 55.1 155 26.5
DCAR_024291 Daucus carota HOM05D003335 ORTHO05D003853 8.9e-06 54.7 98 35.7
HanXRQChr01g0022981 Helianthus annuus HOM05D003335 ORTHO05D003853 8.9e-06 54.7 98 37.8
Lj5C147T4 Lonicera japonica HOM05D003769 ORTHO05D004521 8.9e-06 54.7 137 24.1


User provided reference genes

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