Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 1.7e-206 722.6 409 100.0
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 9.9e-175 617.1 435 82.8
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 1.6e-164 583.2 434 77.9
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 4.6e-164 581.6 434 77.6
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 1.5e-162 576.6 433 77.6
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.6e-161 573.2 443 75.6
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 4.8e-161 571.6 432 76.9
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 3.1e-160 568.9 432 75.9
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 6.9e-160 567.8 436 75.9
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 2.0e-159 566.2 433 76.7
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 2.6e-159 565.8 424 78.5
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 9.9e-159 563.9 439 75.6
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 1.7e-158 563.1 437 75.3
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 8.4e-158 560.8 432 75.2
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 9.3e-157 557.4 432 74.8
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 7.9e-156 554.3 435 75.2
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 1.0e-155 553.9 432 74.5
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 6.7e-155 551.2 435 74.9
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 8.7e-155 550.8 432 74.3
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 1.1e-154 550.4 410 79.5
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 1.9e-154 549.7 432 74.1
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 1.9e-154 549.7 432 73.8
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 3.3e-154 548.9 432 73.6
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 3.1e-152 542.3 427 73.8
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 9.0e-152 540.8 456 71.1
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 7.6e-151 537.7 437 73.5
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 3.8e-150 535.4 434 73.7
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 4.9e-150 535.0 434 72.1
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 4.9e-150 535.0 432 72.2
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 4.9e-150 535.0 433 73.7
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 6.4e-150 534.6 434 74.7
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 8.4e-150 534.3 453 60.7
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 1.1e-149 533.9 432 72.0
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.1e-149 533.9 434 72.8
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 2.1e-148 529.6 408 78.7
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 1.3e-147 526.9 432 69.9
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 1.8e-147 526.6 432 70.8
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 3.9e-147 525.4 438 68.7
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 5.1e-147 525.0 404 76.2
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.5e-146 523.5 455 60.2
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 5.6e-146 521.5 434 65.9
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 1.3e-145 520.4 439 70.8
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 2.1e-145 519.6 434 71.9
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 1.2e-143 513.8 437 70.3
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 2.0e-143 513.1 432 70.6
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 2.6e-143 512.7 459 61.7
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 3.4e-143 512.3 439 62.2
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 7.6e-143 511.1 447 68.9
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 1.4e-141 506.9 441 66.9
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.4e-141 506.9 465 66.5
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 1.6e-140 503.4 437 68.6
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 1.3e-139 500.4 558 51.1
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 3.0e-139 499.2 600 47.8
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 8.7e-139 497.7 416 62.7
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 3.3e-138 495.7 404 72.8
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 2.2e-137 493.0 439 67.4
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 4.8e-137 491.9 437 67.3
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 1.2e-135 487.3 437 65.9
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 2.0e-135 486.5 431 67.3
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 2.6e-135 486.1 437 66.8
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 1.1e-133 480.7 437 67.0
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 1.4e-133 480.3 437 64.5
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 2.1e-132 476.5 438 66.4
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 1.1e-130 470.7 436 55.3
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 1.1e-130 470.7 437 65.2
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 3.3e-130 469.2 453 64.0
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 3.3e-130 469.2 447 64.4
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 9.7e-130 467.6 438 65.5
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 1.3e-129 467.2 431 64.5
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 3.7e-129 465.7 441 65.1
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 6.3e-129 464.9 441 65.1
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 2.9e-126 456.1 424 55.4
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 7.2e-125 451.4 492 55.7
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 9.4e-125 451.1 439 64.2
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 1.2e-124 450.7 438 55.0
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 2.7e-124 449.5 435 54.0
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 2.3e-123 446.4 465 52.7
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 2.3e-123 446.4 438 54.6
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 5.7e-122 441.8 396 57.8
Nitab4.5_0001797g0090 Nicotiana tabacum HOM05D006809 ORTHO05D008609 9.7e-122 441.0 470 60.6
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 6.3e-121 438.3 393 66.9
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 4.1e-120 435.6 433 63.3
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 5.7e-114 415.2 429 54.1
FvH4_5g13570 Fragaria vesca HOM05D006809 ORTHO05D008609 6.3e-113 411.8 333 75.1
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 1.3e-110 404.1 338 63.0
Prupe.5G207700 Prunus persica HOM05D006809 ORTHO05D008609 7.2e-109 398.3 384 65.9
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 2.6e-106 389.8 442 54.5
Thecc.K0005900 Theobroma cacao HOM05D006809 ORTHO05D008609 4.1e-104 382.5 267 71.2
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 4.7e-100 369.0 424 58.5
AUR62039658 Chenopodium quinoa HOM05D006809 ORTHO05D008609 8.3e-97 358.2 403 54.8
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 8.9e-91 338.2 438 53.9
vmacro17627 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 3.9e-78 296.2 334 50.3
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 9.8e-74 281.6 270 69.3
CDE10G1159 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 1.2e-68 264.6 269 53.9
Psat1g128360 Pisum sativum HOM05D006809 ORTHO05D008609 1.5e-66 257.7 220 76.8
Peaxi162Scf01223g00014 Petunia axillaris HOM05D006809 ORTHO05D008609 5.1e-62 242.7 218 62.4
vmacro17626 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 2.4e-56 223.8 189 70.9
Ah.11g047540 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.1e-45 188.3 406 35.0
PGSC0003DMG400023259 Solanum tuberosum HOM05D006809 ORTHO05D008609 1.5e-45 188.0 160 81.2
Haze_26316 Corylus avellana HOM05D006809 ORTHO05D008609 2.4e-43 180.6 262 40.5
Solyc12g038527.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 4.5e-42 176.4 144 61.8
Glyma.04G160301 Glycine max HOM05D006809 ORTHO05D008609 7.6e-42 175.6 147 84.4
CBR_g41384 Chara braunii HOM05D006809 ORTHO05D000002 3.8e-41 173.3 188 66.5
MD14G1214700 Malus domestica HOM05D006809 ORTHO05D008609 1.3e-30 138.3 126 57.9
Solyc12g038523.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 5.1e-30 136.3 101 65.3
Medtr6g088180 Medicago truncatula HOM05D006809 ORTHO05D008609 6.2e-28 129.4 172 46.5
MD14G1214500 Malus domestica HOM05D006809 ORTHO05D008609 1.1e-27 128.6 91 74.7
CAN.G131.10 Capsicum annuum HOM05D006809 ORTHO05D008609 9.0e-27 125.6 130 55.4
arahy.Tifrunner.gnm1.ann1.BJ4A4M Arachis hypogaea HOM05D006809 ORTHO05D008609 5.0e-25 119.8 87 71.3
Medtr2g060475 Medicago truncatula HOM05D006809 ORTHO05D008609 3.0e-22 110.5 148 37.8
CDE10G1173 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 1.1e-21 108.6 116 45.7
Solyc12g038550.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 7.4e-21 105.9 144 39.6
SEGI_19563 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 1.8e-19 101.3 67 71.6
Psat6g135880 Pisum sativum HOM05D006809 ORTHO05D008609 3.4e-18 97.1 126 46.0
Psat1g128400 Pisum sativum HOM05D006809 ORTHO05D008609 1.8e-14 84.7 63 68.3
MD14G1214400 Malus domestica HOM05D006809 ORTHO05D008609 4.8e-12 76.6 44 72.7
Thecc.03G286100 Theobroma cacao HOM05D006809 ORTHO05D008609 4.8e-12 76.6 50 74.0
CBR_g71889 Chara braunii HOM05D006809 ORTHO05D008609 5.3e-11 73.2 63 58.7
Medtr2g061440 Medicago truncatula HOM05D002527 ORTHO05D001267 2.0e-10 71.2 42 73.8
Medtr4g088675 Medicago truncatula HOM05D000836 ORTHO05D000709 1.0e-06 58.9 133 30.8
Hma1.2p1_0736F.1_g210710 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 1.4e-06 58.5 153 27.5


User provided reference genes

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