Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 0.0e+00 1338.9 676 100.0
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 0.0e+00 1326.6 676 99.0
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 0.0e+00 1098.6 687 79.9
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.3e-292 1007.7 687 75.0
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.8e-290 1002.3 686 74.5
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 2.4e-290 1001.9 686 74.8
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 3.1e-290 1001.5 692 74.1
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 3.8e-288 994.6 686 74.5
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 1.6e-286 989.2 690 73.8
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 3.5e-286 988.0 697 72.6
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 5.1e-285 984.2 687 73.9
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 6.6e-285 983.8 690 73.6
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 2.8e-283 978.4 663 75.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 4.8e-283 977.6 689 71.1
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 5.3e-282 974.2 687 72.2
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.5e-281 972.6 686 72.2
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 1.1e-279 966.5 662 74.8
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 2.7e-278 961.8 665 71.7
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 4.6e-278 961.1 651 73.1
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 1.8e-277 959.1 673 73.6
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 1.6e-275 952.6 684 69.3
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 2.4e-274 948.7 676 69.7
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 5.3e-274 947.6 678 70.9
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 6.9e-274 947.2 660 73.6
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 2.6e-273 945.3 672 71.6
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 3.4e-273 944.9 692 70.2
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 5.8e-273 944.1 642 71.8
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 7.6e-273 943.7 681 71.1
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.3e-272 943.0 676 69.4
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 1.7e-272 942.6 697 69.6
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.2e-272 942.2 680 70.1
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-271 939.9 679 69.4
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 1.4e-271 939.5 637 75.5
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.5e-271 937.6 680 69.4
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 9.3e-271 936.8 680 70.3
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.6e-270 936.0 634 73.2
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 2.1e-270 935.6 683 71.3
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 4.6e-270 934.5 669 70.9
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 3.0e-269 931.8 676 70.0
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 5.1e-269 931.0 689 70.1
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 6.7e-269 930.6 644 72.5
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 8.7e-269 930.2 669 69.4
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 1.1e-268 929.9 690 70.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 4.3e-268 927.9 649 70.1
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 9.6e-268 926.8 679 70.1
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 6.2e-267 924.1 674 71.2
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 1.1e-266 923.3 686 69.0
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.4e-266 922.2 712 68.5
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 3.1e-266 921.8 697 68.3
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 1.2e-265 919.8 679 69.4
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 5.8e-265 917.5 642 72.6
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 5.8e-265 917.5 676 70.4
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 6.5e-264 914.1 680 68.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 1.4e-263 912.9 687 68.0
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 1.6e-262 909.4 692 68.1
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.6e-259 899.4 689 67.1
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 2.8e-259 898.7 675 66.4
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 3.7e-259 898.3 654 69.7
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 6.3e-259 897.5 663 69.1
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 6.3e-259 897.5 653 69.2
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 8.2e-259 897.1 679 68.2
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 1.1e-258 896.7 653 70.1
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 1.1e-258 896.7 673 69.4
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.4e-258 896.3 689 67.3
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 2.4e-258 895.6 654 69.4
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 3.1e-258 895.2 653 69.1
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 5.3e-258 894.4 600 72.0
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 9.0e-258 893.6 654 69.4
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.5e-257 892.9 657 68.9
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 2.6e-257 892.1 616 70.9
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 7.7e-257 890.6 691 67.6
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.0e-256 890.2 684 67.8
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 1.3e-256 889.8 691 67.4
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 2.2e-256 889.0 670 68.4
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.0e-253 880.2 564 77.8
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 3.0e-253 878.6 684 66.4
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 5.3e-250 867.8 593 70.7
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.5e-249 866.3 680 63.1
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 4.2e-247 858.2 679 63.3
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 5.5e-247 857.8 595 73.9
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 3.0e-245 852.0 565 75.8
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 8.8e-245 850.5 669 66.8
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.6e-244 849.0 641 68.0
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 1.0e-240 837.0 558 70.6
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 2.1e-238 829.3 681 63.3
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 3.9e-237 825.1 564 73.9
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 5.0e-232 808.1 811 55.1
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 5.0e-232 808.1 670 64.0
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.9e-231 806.2 670 63.0
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 5.2e-229 798.1 571 69.5
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 4.4e-228 795.0 806 54.5
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 4.7e-222 775.0 607 62.4
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.8e-210 736.5 641 60.8
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 3.6e-206 722.2 610 60.2
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 2.1e-198 696.4 473 74.8
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 3.7e-187 659.1 790 48.2
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 7.1e-186 654.8 431 74.2
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 3.4e-164 582.8 381 75.3
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 4.3e-143 512.7 453 57.4
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.1e-125 454.9 530 48.1
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 3.6e-113 413.3 352 61.1
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 5.2e-112 409.5 548 43.6
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 8.8e-112 408.7 300 68.0
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.0e-96 358.6 273 66.3
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.2e-84 318.5 322 54.0
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.2e-84 318.5 322 54.0
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.2e-81 308.5 556 35.8
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 3.6e-81 307.0 231 63.6
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 3.5e-76 290.4 236 64.0
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 4.4e-63 246.9 578 31.8
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 3.8e-54 217.2 255 45.9
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 5.6e-50 203.4 206 52.9
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.9e-47 192.6 149 67.1
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.0e-35 154.5 183 45.4
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 6.5e-30 136.7 143 51.0
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 3.0e-27 127.9 124 51.6
RcHm_v2.0_Chr1g0380361 Rosa chinensis HOM05D006589 ORTHO05D008350 3.7e-09 67.8 81 59.3
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 6.3e-09 67.0 105 41.0
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 9.1e-08 63.2 79 40.5


User provided reference genes

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