Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2969 Salvia bowleyana HOM05D005856 ORTHO05D015634 2.6e-52 208.4 100 100.0
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 1.4e-18 96.3 63 76.2
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 8.1e-14 80.5 54 72.2
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 1.1e-13 80.1 62 61.3
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 4.0e-13 78.2 62 61.3
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 5.3e-13 77.8 54 66.7
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 9.0e-13 77.0 63 57.1
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 1.2e-12 76.6 62 54.8
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 1.2e-12 76.6 58 62.1
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 1.2e-12 76.6 62 58.1
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 1.2e-12 76.6 56 64.3
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 1.5e-12 76.3 61 59.0
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 1.5e-12 76.3 62 58.1
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 2.0e-12 75.9 63 57.1
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 2.0e-12 75.9 54 64.8
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 2.0e-12 75.9 62 54.8
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 2.0e-12 75.9 63 57.1
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 2.0e-12 75.9 63 57.1
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 58.1
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 58.1
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 61.3
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 61.3
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 61.3
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 61.3
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 61.3
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 61.3
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 2.6e-12 75.5 62 61.3
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 3.4e-12 75.1 63 55.6
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 3.4e-12 75.1 63 55.6
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 4.5e-12 74.7 62 56.5
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 4.5e-12 74.7 55 63.6
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 4.5e-12 74.7 62 56.5
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 4.5e-12 74.7 62 56.5
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 4.5e-12 74.7 62 56.5
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 4.5e-12 74.7 55 63.6
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 5.8e-12 74.3 55 61.8
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 5.8e-12 74.3 62 58.1
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 5.8e-12 74.3 63 55.6
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 5.8e-12 74.3 55 61.8
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 5.8e-12 74.3 56 62.5
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 7.6e-12 73.9 62 59.7
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 7.6e-12 73.9 55 65.5
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 1.0e-11 73.6 62 56.5
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.0e-11 73.6 54 64.8
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 1.0e-11 73.6 62 56.5
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 1.3e-11 73.2 53 66.0
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.3e-11 73.2 54 64.8
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 1.3e-11 73.2 54 64.8
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 1.3e-11 73.2 62 54.8
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 1.3e-11 73.2 54 63.0
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 1.3e-11 73.2 62 54.8
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 1.3e-11 73.2 62 56.5
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 1.3e-11 73.2 55 61.8
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 1.7e-11 72.8 62 56.5
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 2.9e-11 72.0 56 58.9
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 2.9e-11 72.0 62 53.2
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 2.9e-11 72.0 62 58.1
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 2.9e-11 72.0 69 52.2
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 2.9e-11 72.0 54 63.0
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 2.9e-11 72.0 54 63.0
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 2.9e-11 72.0 54 63.0
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 2.9e-11 72.0 54 63.0
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 3.8e-11 71.6 54 63.0
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 3.8e-11 71.6 54 63.0
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 3.8e-11 71.6 54 63.0
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 4.9e-11 71.2 62 53.2
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 4.9e-11 71.2 62 53.2
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 4.9e-11 71.2 53 64.2
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 4.9e-11 71.2 54 59.3
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 4.9e-11 71.2 61 59.0
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 4.9e-11 71.2 62 54.8
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 4.9e-11 71.2 63 52.4
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 4.9e-11 71.2 54 61.1
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 6.5e-11 70.9 54 64.8
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 6.5e-11 70.9 62 56.5
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 6.5e-11 70.9 69 50.7
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 6.5e-11 70.9 69 50.7
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 6.5e-11 70.9 69 50.7
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 6.5e-11 70.9 69 50.7
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 6.5e-11 70.9 69 50.7
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 6.5e-11 70.9 62 53.2
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 6.5e-11 70.9 54 61.1
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 8.4e-11 70.5 54 59.3
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 8.4e-11 70.5 54 61.1
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 8.4e-11 70.5 54 61.1
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 1.1e-10 70.1 62 53.2
SalBow5G1607 Salvia bowleyana HOM05D012093 ORTHO05D015634 1.1e-10 70.1 35 91.4
SalBow8G1723 Salvia bowleyana HOM05D001430 ORTHO05D015634 1.1e-10 70.1 35 91.4
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 1.9e-10 69.3 61 52.5
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 1.9e-10 69.3 54 59.3
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 1.9e-10 69.3 63 55.6
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 2.5e-10 68.9 61 54.1
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 2.5e-10 68.9 62 53.2
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 3.2e-10 68.6 54 59.3
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 3.2e-10 68.6 54 55.6
SalBow2G0087 Salvia bowleyana HOM05D012093 ORTHO05D015634 3.2e-10 68.6 35 88.6
SalBow7G3358 Salvia bowleyana HOM05D012093 ORTHO05D015634 3.2e-10 68.6 35 88.6
SalBow7G4417 Salvia bowleyana HOM05D012093 ORTHO05D015634 3.2e-10 68.6 35 88.6
SalBow8G3167 Salvia bowleyana HOM05D012093 ORTHO05D015634 3.2e-10 68.6 35 88.6
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 3.2e-10 68.6 53 64.2
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 5.5e-10 67.8 54 57.4
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 5.5e-10 67.8 54 57.4
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 9.3e-10 67.0 53 58.5
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 1.2e-09 66.6 69 50.7
SalBow1G8188 Salvia bowleyana HOM05D012093 ORTHO05D015634 1.6e-09 66.2 34 88.2
SalBow7G4764 Salvia bowleyana HOM05D012093 ORTHO05D015634 1.6e-09 66.2 35 85.7
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 1.6e-09 66.2 56 58.9
SalBow6G4352 Salvia bowleyana HOM05D001898 ORTHO05D002580 2.7e-09 65.5 59 54.2
SalBow7G2711 Salvia bowleyana HOM05D001898 ORTHO05D015634 2.7e-09 65.5 47 68.1
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 6.0e-09 64.3 79 48.1
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.8e-08 62.8 61 50.8
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 2.3e-08 62.4 50 58.0
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 3.0e-08 62.0 62 46.8
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 4.3e-07 58.2 53 52.8
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 4.3e-07 58.2 55 49.1
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 9.6e-07 57.0 56 46.4
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 2.1e-06 55.8 55 49.1
SalBow5G1845 Salvia bowleyana HOM05D001898 ORTHO05D002580 2.1e-06 55.8 29 89.7
SalBow7G3298 Salvia bowleyana HOM05D001898 ORTHO05D015634 2.1e-06 55.8 29 89.7
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 3.7e-06 55.1 61 41.0
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 6.2e-06 54.3 54 46.3
SalBow6G0525 Salvia bowleyana HOM05D001898 ORTHO05D002580 8.2e-06 53.9 47 59.6
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 8.2e-06 53.9 55 45.5


User provided reference genes

Program Settings