Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2402 Salvia bowleyana HOM05D002485 ORTHO05D002629 2.2e-120 435.6 224 100.0
SalBow1G7441 Salvia bowleyana HOM05D000011 ORTHO05D002629 3.9e-80 302.0 157 96.2
SalBow7G2385 Salvia bowleyana HOM05D001475 ORTHO05D016858 2.4e-53 213.0 125 86.4
SalBow1G2843 Salvia bowleyana HOM05D002485 ORTHO05D002629 1.4e-21 107.5 58 91.4
SalBow1G3970 Salvia bowleyana HOM05D002485 ORTHO05D002629 1.4e-21 107.5 58 91.4
AL7G29750 Arabidopsis lyrata HOM05D002485 ORTHO05D002629 1.7e-19 100.5 61 77.0
AT4G23620 Arabidopsis thaliana HOM05D002485 ORTHO05D002629 1.7e-19 100.5 61 77.0
CARHR230980 Cardamine hirsuta HOM05D002485 ORTHO05D002629 2.2e-19 100.1 61 75.4
Migut.A00704 Erythranthe guttata HOM05D002485 ORTHO05D002629 2.2e-19 100.1 58 81.0
Lj7C8T13 Lonicera japonica HOM05D002485 ORTHO05D002629 2.2e-19 100.1 58 81.0
Oeu042368.1 Olea europaea HOM05D002485 ORTHO05D002629 2.9e-19 99.8 58 81.0
THA.LOC104814787 Tarenaya hassleriana HOM05D002485 ORTHO05D002629 5.0e-19 99.0 61 73.8
TAR629G0963 Trochodendron aralioides HOM05D002485 ORTHO05D002629 5.0e-19 99.0 58 79.3
Duzib068G0591 Durio zibethinus HOM05D002485 ORTHO05D002629 6.5e-19 98.6 61 77.0
Gorai.003G184300 Gossypium raimondii HOM05D002485 ORTHO05D002629 8.5e-19 98.2 61 75.4
TAR636G1130 Trochodendron aralioides HOM05D002485 ORTHO05D002629 8.5e-19 98.2 58 79.3
Carub.0007s1752 Capsella rubella HOM05D002485 ORTHO05D002629 1.1e-18 97.8 61 73.8
Cfa017704 Carpinus fangiana HOM05D002156 ORTHO05D002328 1.1e-18 97.8 58 77.6
Haze_20433 Corylus avellana HOM05D002485 ORTHO05D002629 1.1e-18 97.8 58 77.6
Lsat_1_v5_gn_7_74860 Lactuca sativa HOM05D002485 ORTHO05D002629 1.1e-18 97.8 58 79.3
Oeu059575.1 Olea europaea HOM05D002485 ORTHO05D002629 1.4e-18 97.4 58 77.6
MSTRG.13866 Avicennia marina HOM05D002485 ORTHO05D002629 1.9e-18 97.1 58 77.6
ECA234G1159 Erigeron canadensis HOM05D000431 ORTHO05D000364 1.9e-18 97.1 58 77.6
Gohir.D03G175300 Gossypium hirsutum HOM05D002485 ORTHO05D002629 1.9e-18 97.1 61 73.8
Rhsim07G0086400 Rhododendron simsii HOM05D002485 ORTHO05D002629 1.9e-18 97.1 58 77.6
Sed0004945 Sechium edule HOM05D002485 ORTHO05D002629 1.9e-18 97.1 61 73.8
CiPaw.09G168400 Carya illinoinensis HOM05D002485 ORTHO05D002629 2.5e-18 96.7 58 75.9
Gohir.A03G000043 Gossypium hirsutum HOM05D002485 ORTHO05D002629 2.5e-18 96.7 61 73.8
Lalb_Chr14g0364801 Lupinus albus HOM05D002485 ORTHO05D002629 2.5e-18 96.7 61 75.4
Prupe.1G563200 Prunus persica HOM05D002485 ORTHO05D002629 2.5e-18 96.7 58 77.6
THA.LOC104806423 Tarenaya hassleriana HOM05D002485 ORTHO05D002629 3.2e-18 96.3 61 72.1
TWI15G0639 Tripterygium wilfordii HOM05D002485 ORTHO05D002629 3.2e-18 96.3 61 73.8
BcaB03g12407 Brassica carinata HOM05D002485 ORTHO05D002629 4.2e-18 95.9 61 72.1
BcaC01g00488 Brassica carinata HOM05D002485 ORTHO05D002629 4.2e-18 95.9 61 72.1
BolC3t20298H Brassica oleracea HOM05D002485 ORTHO05D002629 4.2e-18 95.9 61 72.1
BraA08t34145Z Brassica rapa HOM05D002485 ORTHO05D002629 4.2e-18 95.9 61 72.1
DCAR_000640 Daucus carota HOM05D002485 ORTHO05D002629 4.2e-18 95.9 61 73.8
Thhalv10026041m.g Eutrema salsugineum HOM05D002485 ORTHO05D002629 4.2e-18 95.9 61 72.1
HanXRQChr03g0066371 Helianthus annuus HOM05D002485 ORTHO05D002629 4.2e-18 95.9 58 77.6
MD12G1010000 Malus domestica HOM05D002485 ORTHO05D002629 4.2e-18 95.9 58 75.9
Prupe.1G080900 Prunus persica HOM05D002485 ORTHO05D002629 4.2e-18 95.9 58 77.6
vmacro13985 Vaccinium macrocarpon HOM05D002485 ORTHO05D002629 4.2e-18 95.9 58 77.6
Aa31LG6G6840 Aethionema arabicum HOM05D002485 ORTHO05D002629 5.5e-18 95.5 58 72.4
ClCG10G015820 Citrullus lanatus HOM05D002485 ORTHO05D002629 5.5e-18 95.5 61 72.1
COL.COLO4_16964 Corchorus olitorius HOM05D002485 ORTHO05D002629 5.5e-18 95.5 61 73.8
MD14G1007200 Malus domestica HOM05D002485 ORTHO05D002629 5.5e-18 95.5 58 74.1
GSVIVG01019058001 Vitis vinifera HOM05D002485 ORTHO05D002629 5.5e-18 95.5 58 75.9
GSVIVG01019439001 Vitis vinifera HOM05D002485 ORTHO05D002629 5.5e-18 95.5 58 75.9
BcaC09g50970 Brassica carinata HOM05D002485 ORTHO05D002629 7.2e-18 95.1 61 70.5
BcaNung01070 Brassica carinata HOM05D002485 ORTHO05D002629 7.2e-18 95.1 61 70.5
C01p18620 Brassica napus HOM05D002485 ORTHO05D002629 7.2e-18 95.1 61 70.5
BolC1t01790H Brassica oleracea HOM05D002485 ORTHO05D002629 7.2e-18 95.1 61 70.5
Hma1.2p1_0645F.1_g194830 Hydrangea macrophylla HOM05D002485 ORTHO05D002629 7.2e-18 95.1 58 77.6
Peaxi162Scf00515g00128 Petunia axillaris HOM05D002485 ORTHO05D002629 7.2e-18 95.1 58 77.6
Psat3g087280 Pisum sativum HOM05D002485 ORTHO05D002629 7.2e-18 95.1 61 72.1
SGA_v2.0_scaffold96G29006 Striga asiatica HOM05D002485 ORTHO05D002629 7.2e-18 95.1 58 77.6
CSS0045914 Camellia sinensis var. sinensis HOM05D002485 ORTHO05D002629 9.3e-18 94.7 58 75.9
RcHm_v2.0_Chr4g0408271 Rosa chinensis HOM05D002485 ORTHO05D002629 1.2e-17 94.4 61 70.5
Thecc.03G307800 Theobroma cacao HOM05D002485 ORTHO05D002629 1.2e-17 94.4 61 72.1
unitig_748.g7423 Utricularia gibba HOM05D002485 ORTHO05D002629 1.2e-17 94.4 58 77.6
A01p14920 Brassica napus HOM05D002485 ORTHO05D002629 1.6e-17 94.0 61 70.5
C03p80540 Brassica napus HOM05D002485 ORTHO05D002629 1.6e-17 94.0 61 70.5
BraA01t01433Z Brassica rapa HOM05D002485 ORTHO05D002629 1.6e-17 94.0 61 70.5
Manes.01G051500 Manihot esculenta HOM05D002485 ORTHO05D002629 1.6e-17 94.0 85 57.6
CANSAT56G2344 Cannabis sativa HOM05D002485 ORTHO05D002629 2.1e-17 93.6 61 73.8
Dinv38891 Davidia involucrata HOM05D002485 ORTHO05D002629 2.1e-17 93.6 61 70.5
A08p21930 Brassica napus HOM05D002485 ORTHO05D002629 2.7e-17 93.2 54 77.8
CsaV3_3G040630 Cucumis sativus L. HOM05D002485 ORTHO05D002629 2.7e-17 93.2 61 73.8
Lalb_Chr22g0358791 Lupinus albus HOM05D002485 ORTHO05D002629 2.7e-17 93.2 61 72.1
Nitab4.5_0001018g0100 Nicotiana tabacum HOM05D002485 ORTHO05D002629 2.7e-17 93.2 54 79.6
Nitab4.5_0002074g0030 Nicotiana tabacum HOM05D002485 ORTHO05D002629 2.7e-17 93.2 54 79.6
PGR031G0557 Punica granatum HOM05D002485 ORTHO05D002629 2.7e-17 93.2 61 70.5
Solyc11g018560.2 Solanum lycopersicum HOM05D002485 ORTHO05D002629 2.7e-17 93.2 54 79.6
Sopen11g009530 Solanum pennellii HOM05D002485 ORTHO05D002629 2.7e-17 93.2 54 79.6
arahy.Tifrunner.gnm1.ann1.7AP800 Arachis hypogaea HOM05D002485 ORTHO05D002629 3.6e-17 92.8 61 72.1
Glyma.16G036900 Glycine max HOM05D002485 ORTHO05D002629 3.6e-17 92.8 61 70.5
Glyma.19G116200 Glycine max HOM05D002485 ORTHO05D002629 3.6e-17 92.8 61 70.5
Sp7g21540 Schrenkiella parvula HOM05D002485 ORTHO05D002629 3.6e-17 92.8 61 70.5
arahy.Tifrunner.gnm1.ann1.D7E6ZG Arachis hypogaea HOM05D002485 ORTHO05D002629 4.6e-17 92.4 61 72.1
Cc08_g15430 Coffea canephora HOM05D002485 ORTHO05D002629 4.6e-17 92.4 58 75.9
PGSC0003DMG400000893 Solanum tuberosum HOM05D002485 ORTHO05D002629 4.6e-17 92.4 54 79.6
Phvul.001G115600 Phaseolus vulgaris HOM05D002485 ORTHO05D002629 6.1e-17 92.0 61 68.9
FvH4_4g11490 Fragaria vesca HOM05D002485 ORTHO05D002629 7.9e-17 91.7 61 70.5
FAN17G0602 Fragaria x ananassa HOM05D002485 ORTHO05D002629 7.9e-17 91.7 61 70.5
FAN17G1958 Fragaria x ananassa HOM05D002485 ORTHO05D002629 7.9e-17 91.7 61 70.5
FAN22G2077 Fragaria x ananassa HOM05D002485 ORTHO05D002629 7.9e-17 91.7 61 70.5
Hund11427 Selenicereus undatus HOM05D002485 ORTHO05D002629 7.9e-17 91.7 58 74.1
CAN.G1282.2 Capsicum annuum HOM05D001199 ORTHO05D001013 1.8e-16 90.5 54 75.9
Cpa.g.sc122.9 Carica papaya HOM05D002485 ORTHO05D002629 1.8e-16 90.5 96 53.1
PGSC0003DMG400015775 Solanum tuberosum HOM05D002485 ORTHO05D002629 1.8e-16 90.5 72 61.1
QL03p004287 Quercus lobata HOM05D002485 ORTHO05D002629 2.3e-16 90.1 61 67.2
SGA_v2.0_scaffold173G39121 Striga asiatica HOM05D002485 ORTHO05D002629 2.3e-16 90.1 60 71.7
Lj1g0019498 Lotus japonicus HOM05D002485 ORTHO05D002629 3.0e-16 89.7 61 68.9
Ciclev10021787m.g Citrus clementina HOM05D002485 ORTHO05D002629 3.9e-16 89.4 61 67.2
Medtr7g086470 Medicago truncatula HOM05D002485 ORTHO05D002629 3.9e-16 89.4 61 70.5
Atru.chr9.2092 Acer truncatum HOM05D002485 ORTHO05D002629 5.1e-16 89.0 61 68.9
Eucgr.D01799 Eucalyptus grandis HOM05D002485 ORTHO05D002629 5.1e-16 89.0 61 68.9
CDE04G0638 Ceratophyllum demersum HOM05D002485 ORTHO05D002629 6.7e-16 88.6 61 68.9
CDE10G0677 Ceratophyllum demersum HOM05D002485 ORTHO05D002629 8.7e-16 88.2 61 68.9
Ca_08307_v3 Cicer arietinum L. HOM05D002485 ORTHO05D002629 8.7e-16 88.2 61 68.9
MELO3C009795.2 Cucumis melo HOM05D002485 ORTHO05D002629 1.1e-15 87.8 61 67.2
VMungo1383G0365 Vigna mungo HOM05D002485 ORTHO05D002629 1.1e-15 87.8 58 67.2
Sabra01G0073200 Salix brachista HOM05D002485 ORTHO05D002629 1.5e-15 87.4 58 69.0
Potri.001G097801 Populus trichocarpa HOM05D002485 ORTHO05D002629 1.9e-15 87.0 58 69.0
RcHm_v2.0_Chr4g0408291 Rosa chinensis HOM05D002485 ORTHO05D002629 1.9e-15 87.0 61 65.6
Os01g0593500 Oryza sativa ssp. japonica HOM05D002485 ORTHO05D002629 2.5e-15 86.7 61 63.9
Psat7g073920 Pisum sativum HOM05D002485 ORTHO05D002629 2.5e-15 86.7 61 67.2
Zm00001eb357570 Zea mays HOM05D002485 ORTHO05D002629 2.5e-15 86.7 61 63.9
Hma1.2p1_0216F.1_g091210 Hydrangea macrophylla HOM05D002485 ORTHO05D002629 7.4e-15 85.1 55 72.7
Sc22g0005280 Simmondsia chinensis HOM05D002485 ORTHO05D002629 7.4e-15 85.1 54 72.2
HPP92_022952 Vanilla planifolia HOM05D001537 ORTHO05D002595 7.4e-15 85.1 61 68.9
Os05g0270000 Oryza sativa ssp. japonica HOM05D002485 ORTHO05D002629 9.7e-15 84.7 61 62.3
PSO782G0236 Papaver somniferum HOM05D002485 ORTHO05D002629 1.6e-14 84.0 60 63.3
Aqoxy7G01579 Aquilegia oxysepala HOM05D002485 ORTHO05D002629 2.2e-14 83.6 58 67.2
AUR62010767 Chenopodium quinoa HOM05D002485 ORTHO05D002629 2.2e-14 83.6 58 65.5
AUR62021509 Chenopodium quinoa HOM05D002485 ORTHO05D002629 3.7e-14 82.8 58 63.8
PSO384G4895 Papaver somniferum HOM05D002485 ORTHO05D002629 3.7e-14 82.8 60 61.7
EL10Ac5g12848 Beta vulgaris HOM05D002485 ORTHO05D002629 6.3e-14 82.0 58 67.2
Ah.07g196810 Amaranthus hybridus HOM05D002485 ORTHO05D002629 1.1e-13 81.3 52 73.1
PSO135G0521 Papaver somniferum HOM05D002485 ORTHO05D002629 1.4e-13 80.9 60 60.0
FAN07G2448 Fragaria x ananassa HOM05D007128 ORTHO05D009059 4.1e-13 79.3 59 61.0
ATR1127G139 Amborella trichopoda HOM05D002485 ORTHO05D002629 6.9e-13 78.6 61 62.3
SEGI_03456 Sequoiadendron giganteum HOM05D002485 ORTHO05D002629 6.5e-11 72.0 57 56.1
SEGI_20111 Sequoiadendron giganteum HOM05D002485 ORTHO05D002629 6.5e-11 72.0 57 56.1
Pp3c24_15540 Physcomitrium patens HOM05D002485 ORTHO05D002629 8.5e-11 71.6 61 54.1
Mapoly0078s0022 Marchantia polymorpha HOM05D002485 ORTHO05D002629 1.4e-10 70.9 59 55.9
AagrBONN_evm.TU.Sc2ySwM_368.1117 Anthoceros agrestis HOM05D002485 ORTHO05D002629 1.2e-09 67.8 58 58.6
Sopen02g035290 Solanum pennellii HOM05D002485 ORTHO05D002629 8.8e-08 61.6 36 80.6
CBR_g4269 Chara braunii HOM05D002485 ORTHO05D000353 9.7e-07 58.2 56 44.6


User provided reference genes

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