Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.2e-62 244.2 291 100.0
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.2e-57 227.6 291 97.6
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.6e-52 209.9 326 87.1
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.2e-28 131.3 284 77.5
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 4.4e-28 129.4 324 71.6
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 5.8e-28 129.0 325 74.8
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 3.2e-26 123.2 277 81.6
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 7.1e-26 122.1 285 76.8
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 9.3e-26 121.7 324 69.8
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 5.1e-24 115.9 284 76.1
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.1e-23 114.8 273 79.1
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 1.5e-23 114.4 319 70.8
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.9e-23 114.0 278 77.7
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 4.3e-23 112.8 278 80.9
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 2.8e-22 110.2 278 78.4
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 3.6e-22 109.8 278 60.1
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 3.6e-22 109.8 276 78.6
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 4.8e-22 109.4 317 58.0
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 6.2e-22 109.0 276 79.0
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.1e-21 108.2 277 73.6
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 3.1e-21 106.7 315 67.0
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 5.3e-21 105.9 319 69.9
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 5.3e-21 105.9 290 68.6
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 5.3e-21 105.9 277 79.4
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.5e-20 104.4 278 77.7
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 2.0e-20 104.0 278 80.6
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 5.8e-20 102.4 278 77.7
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 5.8e-20 102.4 278 77.7
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 5.8e-20 102.4 316 68.0
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 7.6e-20 102.1 280 69.6
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 7.6e-20 102.1 278 73.7
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 9.9e-20 101.7 315 69.2
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 9.9e-20 101.7 278 77.3
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 9.9e-20 101.7 276 77.9
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.2e-19 100.5 320 68.8
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.2e-19 100.5 59 84.7
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 2.9e-19 100.1 319 67.7
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 2.9e-19 100.1 325 69.2
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 3.8e-19 99.8 278 73.7
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.9e-19 99.4 318 67.3
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 4.9e-19 99.4 280 72.5
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.9e-19 99.4 320 68.1
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.9e-19 99.4 285 75.1
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 6.4e-19 99.0 273 70.0
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 6.4e-19 99.0 279 75.6
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.1e-18 98.2 278 74.1
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 1.4e-18 97.8 278 75.5
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 2.4e-18 97.1 319 68.7
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.4e-18 97.1 319 68.3
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 3.2e-18 96.7 273 79.5
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 5.4e-18 95.9 277 76.9
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 5.4e-18 95.9 277 76.2
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 5.4e-18 95.9 278 74.1
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 5.4e-18 95.9 278 74.5
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 7.1e-18 95.5 278 78.8
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 7.1e-18 95.5 278 78.8
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 9.3e-18 95.1 278 74.1
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 1.2e-17 94.7 325 65.2
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.2e-17 94.7 318 67.9
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.2e-17 94.7 318 67.9
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 1.2e-17 94.7 278 75.5
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.2e-17 94.7 278 72.7
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.7e-17 93.6 278 73.0
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 2.7e-17 93.6 278 74.8
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 2.7e-17 93.6 272 77.9
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 3.5e-17 93.2 320 66.6
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.5e-17 93.2 289 66.1
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 4.6e-17 92.8 279 79.2
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 4.6e-17 92.8 320 39.7
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 6.0e-17 92.4 318 68.6
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 6.0e-17 92.4 318 68.6
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.0e-16 91.7 57 68.4
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.8e-16 90.9 57 66.7
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 2.3e-16 90.5 278 72.7
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.3e-16 90.5 56 71.4
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 5.1e-16 89.4 58 65.5
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 8.7e-16 88.6 278 74.8
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 8.7e-16 88.6 278 70.9
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.1e-15 88.2 278 73.7
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.1e-15 88.2 278 73.7
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 2.5e-15 87.0 55 69.1
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 2.5e-15 87.0 278 70.9
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 4.3e-15 86.3 278 75.2
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 9.6e-15 85.1 57 70.2
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 9.6e-15 85.1 57 66.7
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 9.6e-15 85.1 277 75.5
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 1.3e-14 84.7 58 65.5
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.1e-14 84.0 277 74.4
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 2.1e-14 84.0 56 62.5
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 3.7e-14 83.2 57 66.7
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 3.7e-14 83.2 57 66.7
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 4.8e-14 82.8 57 66.7
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 6.2e-14 82.4 57 66.7
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 1.1e-13 81.6 57 63.2
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 1.1e-13 81.6 57 63.2
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 1.4e-13 81.3 57 59.6
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 1.8e-13 80.9 57 66.7
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 1.8e-13 80.9 57 63.2
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 1.8e-13 80.9 57 63.2
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.4e-13 80.5 57 63.2
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 3.1e-13 80.1 57 63.2
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 5.3e-13 79.3 319 59.2
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 6.9e-13 79.0 56 60.7
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 1.5e-12 77.8 56 60.7
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.7e-11 74.3 53 66.0
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.6e-09 67.8 47 66.0
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 7.9e-09 65.5 64 53.1
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 5.7e-07 59.3 47 61.7
Hma1.2p1_2405F.1_g321440 Hydrangea macrophylla HOM05D002901 ORTHO05D003183 9.6e-07 58.5 51 43.1
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.3e-06 58.2 38 65.8
Hma1.2p1_0244F.1_g101100 Hydrangea macrophylla HOM05D002901 ORTHO05D003183 1.3e-06 58.2 51 43.1
ECA247G3292 Erigeron canadensis HOM05D002901 ORTHO05D003183 1.6e-06 57.8 50 42.0
CANSAT25G2219 Cannabis sativa HOM05D002901 ORTHO05D003183 2.1e-06 57.4 50 44.0
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 2.1e-06 57.4 44 56.8
SGA_v2.0_scaffold7G03687 Striga asiatica HOM05D002901 ORTHO05D003183 2.1e-06 57.4 50 44.0
Lsat_1_v5_gn_9_1861 Lactuca sativa HOM05D002901 ORTHO05D003183 2.8e-06 57.0 53 39.6
vmacro19244 Vaccinium macrocarpon HOM05D002901 ORTHO05D003183 2.8e-06 57.0 50 44.0
LjContig00155g0015255 Lotus japonicus HOM05D002901 ORTHO05D003183 4.8e-06 56.2 50 42.0
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 6.2e-06 55.8 45 57.8
HanXRQChr15g0466591 Helianthus annuus HOM05D002901 ORTHO05D003183 6.2e-06 55.8 50 40.0
Lsat_1_v5_gn_2_2920 Lactuca sativa HOM05D002901 ORTHO05D003183 6.2e-06 55.8 53 39.6
AUR62034384 Chenopodium quinoa HOM05D002901 ORTHO05D003183 8.2e-06 55.5 50 46.0
Glyma.02G223000 Glycine max HOM05D002901 ORTHO05D003183 8.2e-06 55.5 53 39.6
PGR119G2365 Punica granatum HOM05D002901 ORTHO05D003183 8.2e-06 55.5 53 41.5


User provided reference genes

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