Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0576 Salvia bowleyana HOM05D007457 ORTHO05D009435 2.1e-83 312.4 164 100.0
MSTRG.27120 Avicennia marina HOM05D007457 ORTHO05D009435 1.0e-29 134.0 197 45.2
Migut.F00351 Erythranthe guttata HOM05D007457 ORTHO05D009435 9.5e-28 127.5 177 47.5
SGA_v2.0_scaffold44G16713 Striga asiatica HOM05D007457 ORTHO05D009435 3.4e-25 119.0 178 45.5
QL09p014483 Quercus lobata HOM05D007457 ORTHO05D009435 2.3e-21 106.3 184 41.8
QL09p029389 Quercus lobata HOM05D007457 ORTHO05D009435 2.3e-21 106.3 184 41.3
Lj2g0021879 Lotus japonicus HOM05D007457 ORTHO05D009435 1.1e-20 104.0 195 39.0
Lj1A996G52 Lonicera japonica HOM05D007457 ORTHO05D009435 3.3e-20 102.4 194 38.1
ClCG05G007970 Citrullus lanatus HOM05D007457 ORTHO05D009435 7.3e-20 101.3 176 39.2
Cc02_g03100 Coffea canephora HOM05D007457 ORTHO05D009435 1.6e-19 100.1 188 39.9
arahy.Tifrunner.gnm1.ann1.990F6U Arachis hypogaea HOM05D007457 ORTHO05D009435 3.6e-19 99.0 187 38.5
CSS0002258 Camellia sinensis var. sinensis HOM05D007457 ORTHO05D009435 3.6e-19 99.0 190 38.9
CiPaw.04G070400 Carya illinoinensis HOM05D007457 ORTHO05D009435 4.7e-19 98.6 187 39.0
Ciclev10004614m.g Citrus clementina HOM05D007457 ORTHO05D009435 6.2e-19 98.2 178 38.2
Rhsim03G0179800 Rhododendron simsii HOM05D007457 ORTHO05D009435 8.1e-19 97.8 191 36.6
Actinidia34104 Actinidia chinensis HOM05D007457 ORTHO05D009435 2.4e-18 96.3 185 38.4
arahy.Tifrunner.gnm1.ann1.CU1ASG Arachis hypogaea HOM05D007457 ORTHO05D009435 6.8e-18 94.7 187 37.4
Sopen03g004710 Solanum pennellii HOM05D007457 ORTHO05D009435 6.8e-18 94.7 200 36.0
Glyma.16G194000 Glycine max HOM05D007457 ORTHO05D009435 8.9e-18 94.4 185 38.4
Actinidia32867 Actinidia chinensis HOM05D007457 ORTHO05D009435 1.2e-17 94.0 185 36.2
Solyc03g025900.3 Solanum lycopersicum HOM05D007457 ORTHO05D009435 1.2e-17 94.0 203 36.5
Nitab4.5_0000716g0160 Nicotiana tabacum HOM05D007457 ORTHO05D009435 2.0e-17 93.2 201 37.8
Eucgr.L01882 Eucalyptus grandis HOM05D007457 ORTHO05D009435 2.6e-17 92.8 191 37.7
MELO3C006899.2 Cucumis melo HOM05D007457 ORTHO05D009435 3.4e-17 92.4 176 39.2
Eucgr.K00246 Eucalyptus grandis HOM05D007457 ORTHO05D009435 4.4e-17 92.0 191 37.7
Phvul.004G117300 Phaseolus vulgaris HOM05D007457 ORTHO05D009435 5.8e-17 91.7 195 39.5
Cfa008310 Carpinus fangiana HOM05D007457 ORTHO05D009435 7.6e-17 91.3 188 37.2
Medtr6g055360 Medicago truncatula HOM05D007457 ORTHO05D009435 1.3e-16 90.5 192 35.9
Sed0003153 Sechium edule HOM05D007457 ORTHO05D009435 1.3e-16 90.5 177 39.0
Phvul.004G117400 Phaseolus vulgaris HOM05D007457 ORTHO05D009435 1.7e-16 90.1 194 39.2
vmacro06689 Vaccinium macrocarpon HOM05D007457 ORTHO05D009435 1.7e-16 90.1 190 36.8
Aqoxy7G00371 Aquilegia oxysepala HOM05D007457 ORTHO05D009435 2.2e-16 89.7 169 38.5
DCAR_009359 Daucus carota HOM05D007457 ORTHO05D009435 2.2e-16 89.7 203 37.9
Nitab4.5_0003365g0030 Nicotiana tabacum HOM05D007457 ORTHO05D009435 2.9e-16 89.4 200 36.0
Peaxi162Scf00915g00040 Petunia axillaris HOM05D007457 ORTHO05D009435 6.4e-16 88.2 201 36.3
PGSC0003DMG400014289 Solanum tuberosum HOM05D007457 ORTHO05D009435 6.4e-16 88.2 200 36.5
Ca_27692_v3 Cicer arietinum L. HOM05D007457 ORTHO05D009435 8.4e-16 87.8 193 36.3
Haze_13725 Corylus avellana HOM05D007457 ORTHO05D009435 1.1e-15 87.4 187 38.0
CDE09G0818 Ceratophyllum demersum HOM05D005332 ORTHO05D006861 1.9e-15 86.7 186 35.5
Dinv28451 Davidia involucrata HOM05D007457 ORTHO05D009435 2.4e-15 86.3 88 53.4
Lalb_Chr01g0009291 Lupinus albus HOM05D007457 ORTHO05D009435 2.4e-15 86.3 201 33.8
unitig_747.g21768 Utricularia gibba HOM05D007457 ORTHO05D009435 4.2e-15 85.5 167 38.9
CsaV3_3G017010 Cucumis sativus L. HOM05D007457 ORTHO05D009435 7.1e-15 84.7 176 36.9
Gorai.006G048300 Gossypium raimondii HOM05D007457 ORTHO05D009435 7.1e-15 84.7 182 35.7
Manes.14G026700 Manihot esculenta HOM05D007457 ORTHO05D009435 7.1e-15 84.7 193 34.2
Gohir.A09G041365 Gossypium hirsutum HOM05D007457 ORTHO05D009435 9.2e-15 84.3 182 35.7
Psat0s4093g0040 Pisum sativum HOM05D007457 ORTHO05D009435 9.2e-15 84.3 197 35.0
Potri.015G142800 Populus trichocarpa HOM05D007457 ORTHO05D009435 9.2e-15 84.3 186 36.0
Hma1.2p1_2482F.1_g323000 Hydrangea macrophylla HOM05D007457 ORTHO05D009435 1.2e-14 84.0 179 35.2
PGR142G3430 Punica granatum HOM05D007457 ORTHO05D009435 1.2e-14 84.0 177 36.2
TWI23G1174 Tripterygium wilfordii HOM05D007457 ORTHO05D009435 1.2e-14 84.0 189 36.5
TAR629G0903 Trochodendron aralioides HOM05D007457 ORTHO05D009435 1.2e-14 84.0 189 35.4
TPR.G10758 Trifolium pratense HOM05D007457 ORTHO05D009435 1.6e-14 83.6 195 35.4
COL.COLO4_14297 Corchorus olitorius HOM05D007457 ORTHO05D009435 3.5e-14 82.4 187 34.2
Gohir.D09G042000 Gossypium hirsutum HOM05D007457 ORTHO05D009435 3.5e-14 82.4 182 35.2
Duzib084G1133 Durio zibethinus HOM05D007457 ORTHO05D009435 4.6e-14 82.0 187 36.9
HanXRQChr15g0482951 Helianthus annuus HOM05D007457 ORTHO05D009435 6.0e-14 81.6 86 51.2
Hund04734 Selenicereus undatus HOM05D007457 ORTHO05D009435 6.0e-14 81.6 179 36.3
Zm00001eb259890 Zea mays HOM05D007457 ORTHO05D009435 7.8e-14 81.3 138 39.9
Ah.07g207290 Amaranthus hybridus HOM05D007457 ORTHO05D009435 1.0e-13 80.9 88 52.3
AUR62015996 Chenopodium quinoa HOM05D007457 ORTHO05D009435 1.7e-13 80.1 87 51.7
Glyma.16G192500 Glycine max HOM05D007457 ORTHO05D009435 1.7e-13 80.1 115 44.3
Glyma.16G193166 Glycine max HOM05D007457 ORTHO05D009435 5.1e-13 78.6 114 43.9
Nn6g33538 Nelumbo nucifera HOM05D007457 ORTHO05D009435 6.6e-13 78.2 187 34.2
EL10Ac3g05665 Beta vulgaris HOM05D007457 ORTHO05D009435 8.7e-13 77.8 95 43.2
Lsat_1_v5_gn_3_64061 Lactuca sativa HOM05D007457 ORTHO05D009435 8.7e-13 77.8 87 49.4
Atru.chr1.473 Acer truncatum HOM05D007457 ORTHO05D009435 1.1e-12 77.4 80 50.0
PSO478G1701 Papaver somniferum HOM05D007457 ORTHO05D009435 1.1e-12 77.4 88 51.1
PSO782G2212 Papaver somniferum HOM05D007457 ORTHO05D009435 1.1e-12 77.4 88 51.1
THA.LOC104798924 Tarenaya hassleriana HOM05D007457 ORTHO05D009435 1.1e-12 77.4 191 35.6
Thecc.03G175400 Theobroma cacao HOM05D007457 ORTHO05D009435 1.5e-12 77.0 184 33.2
AUR62021203 Chenopodium quinoa HOM05D007457 ORTHO05D009435 3.3e-12 75.9 87 50.6
QL09p014434 Quercus lobata HOM05D007457 ORTHO05D009435 3.3e-12 75.9 238 31.5
Sc13g0008580 Simmondsia chinensis HOM05D007457 ORTHO05D009435 1.2e-11 73.9 105 38.1
CAN.G913.2 Capsicum annuum HOM05D007457 ORTHO05D009435 2.1e-11 73.2 78 50.0
MBI17_g34336_MAGBIO Magnolia biondii HOM05D007457 ORTHO05D009435 2.8e-11 72.8 62 56.5
Carub.0005s1507 Capsella rubella HOM05D007457 ORTHO05D009435 4.7e-11 72.0 194 32.5
ECA234G0644 Erigeron canadensis HOM05D007457 ORTHO05D009435 4.7e-11 72.0 84 50.0
BcaC09g49913 Brassica carinata HOM05D007457 ORTHO05D009435 8.1e-11 71.2 51 62.7
C01p31350 Brassica napus HOM05D007457 ORTHO05D009435 8.1e-11 71.2 51 62.7
BolC1t03073H Brassica oleracea HOM05D007457 ORTHO05D009435 8.1e-11 71.2 51 62.7
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 1.4e-10 70.5 173 32.9
AL5G28420 Arabidopsis lyrata HOM05D007457 ORTHO05D009435 1.8e-10 70.1 192 33.3
A01p25110 Brassica napus HOM05D007457 ORTHO05D009435 2.4e-10 69.7 51 60.8
BraA01t02422Z Brassica rapa HOM05D007457 ORTHO05D009435 2.4e-10 69.7 51 60.8
Cpa.g.sc107.42 Carica papaya HOM05D007457 ORTHO05D009435 2.4e-10 69.7 89 44.9
BcaB05g22976 Brassica carinata HOM05D007457 ORTHO05D009435 1.5e-09 67.0 51 58.8
Aa31LG4G17420 Aethionema arabicum HOM05D007457 ORTHO05D009435 2.0e-09 66.6 181 34.8
CARHR157710 Cardamine hirsuta HOM05D007457 ORTHO05D009435 2.6e-09 66.2 53 58.5
GSVIVG01010540001 Vitis vinifera HOM05D007457 ORTHO05D009435 5.8e-09 65.1 183 29.5
AT3G48900 Arabidopsis thaliana HOM05D007457 ORTHO05D009435 1.3e-08 63.9 192 31.2
Thhalv10010222m.g Eutrema salsugineum HOM05D007457 ORTHO05D009435 2.9e-08 62.8 190 32.6
Sp5g13150 Schrenkiella parvula HOM05D007457 ORTHO05D009435 3.8e-08 62.4 196 30.6


User provided reference genes

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