Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0472 Salvia bowleyana HOM05D001719 ORTHO05D352151 2.5e-33 144.8 71 100.0
SalBow6G1197 Salvia bowleyana HOM05D001719 ORTHO05D008373 1.4e-20 102.4 70 75.7
MSTRG.20220 Avicennia marina HOM05D001719 ORTHO05D008373 1.2e-19 99.4 70 74.3
CDE05G3484 Ceratophyllum demersum HOM05D001719 ORTHO05D008373 2.1e-19 98.6 69 72.5
Oeu037281.1 Olea europaea HOM05D001719 ORTHO05D008373 2.1e-19 98.6 69 73.9
Cc02_g19830 Coffea canephora HOM05D001719 ORTHO05D008373 6.0e-19 97.1 69 69.6
Solyc01g107040.3 Solanum lycopersicum HOM05D001719 ORTHO05D008373 1.7e-18 95.5 70 65.7
Potri.001G294900 Populus trichocarpa HOM05D001719 ORTHO05D008373 3.0e-18 94.7 69 69.6
QL11p030649 Quercus lobata HOM05D001719 ORTHO05D008373 3.0e-18 94.7 70 68.6
Rhsim11G0151200 Rhododendron simsii HOM05D001719 ORTHO05D008373 3.9e-18 94.4 69 69.6
Rhsim11G0153000 Rhododendron simsii HOM05D001719 ORTHO05D008373 3.9e-18 94.4 69 69.6
SGA_v2.0_scaffold32G12995 Striga asiatica HOM05D001719 ORTHO05D008373 3.9e-18 94.4 70 70.0
Actinidia34362 Actinidia chinensis HOM05D001719 ORTHO05D008373 5.1e-18 94.0 69 69.6
Cpa.g.sc106.52 Carica papaya HOM05D001719 ORTHO05D008373 5.1e-18 94.0 69 69.6
Eucgr.I01063 Eucalyptus grandis HOM05D001719 ORTHO05D008373 5.1e-18 94.0 69 69.6
Sabra16G0184000 Salix brachista HOM05D001719 ORTHO05D008373 5.1e-18 94.0 69 69.6
Dinv15804 Davidia involucrata HOM05D001719 ORTHO05D008373 6.6e-18 93.6 69 69.6
GSVIVG01037840001 Vitis vinifera HOM05D001719 ORTHO05D008373 6.6e-18 93.6 69 69.6
EL10Ac8g19389 Beta vulgaris HOM05D001719 ORTHO05D008373 8.6e-18 93.2 69 68.1
Lsat_1_v5_gn_7_85141 Lactuca sativa HOM05D001719 ORTHO05D008373 8.6e-18 93.2 70 67.1
Manes.10G081800 Manihot esculenta HOM05D001719 ORTHO05D008373 8.6e-18 93.2 69 69.6
Peaxi162Scf00016g02843 Petunia axillaris HOM05D001719 ORTHO05D008373 8.6e-18 93.2 70 67.1
Sp3g17670 Schrenkiella parvula HOM05D001719 ORTHO05D008373 8.6e-18 93.2 70 67.1
Aqoxy5G00876 Aquilegia oxysepala HOM05D001719 ORTHO05D008373 1.1e-17 92.8 70 64.3
BcaB04g19055 Brassica carinata HOM05D001719 ORTHO05D008373 1.1e-17 92.8 70 67.1
CiPaw.05G017600 Carya illinoinensis HOM05D001719 ORTHO05D008373 1.1e-17 92.8 69 68.1
Hma1.2p1_1059F.1_g252950 Hydrangea macrophylla HOM05D001719 ORTHO05D008373 1.1e-17 92.8 69 69.6
unitig_0.g884 Utricularia gibba HOM05D001719 ORTHO05D008373 1.1e-17 92.8 70 67.1
FvH4_2g04300 Fragaria vesca HOM05D001719 ORTHO05D008373 1.5e-17 92.4 70 67.1
FAN15G0793 Fragaria x ananassa HOM05D001719 ORTHO05D008373 1.5e-17 92.4 70 67.1
FAN24G2126 Fragaria x ananassa HOM05D001719 ORTHO05D008373 1.5e-17 92.4 70 67.1
Lj9A327T33 Lonicera japonica HOM05D001719 ORTHO05D008373 1.5e-17 92.4 73 64.4
Nn5g30572 Nelumbo nucifera HOM05D001719 ORTHO05D008373 1.5e-17 92.4 69 69.6
Sopen01g049310 Solanum pennellii HOM05D001719 ORTHO05D008373 1.5e-17 92.4 70 64.3
PGSC0003DMG400025840 Solanum tuberosum HOM05D001719 ORTHO05D008373 1.5e-17 92.4 70 64.3
Carub.0003s1950 Capsella rubella HOM05D001719 ORTHO05D008373 1.9e-17 92.0 70 67.1
Glyma.11G001700 Glycine max HOM05D001719 ORTHO05D008373 1.9e-17 92.0 70 68.6
Nitab4.5_0001105g0040 Nicotiana tabacum HOM05D001719 ORTHO05D008373 1.9e-17 92.0 70 64.3
BcaC01g03613 Brassica carinata HOM05D001719 ORTHO05D008373 2.5e-17 91.7 70 65.7
A03p41340 Brassica napus HOM05D001719 ORTHO05D008373 2.5e-17 91.7 70 65.7
C03p50500 Brassica napus HOM05D001719 ORTHO05D008373 2.5e-17 91.7 70 65.7
BolC3t17340H Brassica oleracea HOM05D001719 ORTHO05D008373 2.5e-17 91.7 70 65.7
BraA03t13288Z Brassica rapa HOM05D001719 ORTHO05D008373 2.5e-17 91.7 70 65.7
CSS0031263 Camellia sinensis var. sinensis HOM05D001719 ORTHO05D008373 2.5e-17 91.7 69 68.1
DCAR_001697 Daucus carota HOM05D001719 ORTHO05D008373 2.5e-17 91.7 70 65.7
HanXRQChr16g0509301 Helianthus annuus HOM05D001719 ORTHO05D008373 2.5e-17 91.7 69 65.2
PSO017G6860 Papaver somniferum HOM05D001719 ORTHO05D008373 2.5e-17 91.7 73 63.0
RcHm_v2.0_Chr6g0253741 Rosa chinensis HOM05D001719 ORTHO05D008373 2.5e-17 91.7 70 67.1
AT3G19630 Arabidopsis thaliana HOM05D001719 ORTHO05D008373 3.3e-17 91.3 70 65.7
CAN.G606.57 Capsicum annuum HOM05D001719 ORTHO05D008373 3.3e-17 91.3 70 65.7
Ciclev10028673m.g Citrus clementina HOM05D001719 ORTHO05D008373 3.3e-17 91.3 70 64.3
ECA236G5137 Erigeron canadensis HOM05D001719 ORTHO05D008373 3.3e-17 91.3 70 64.3
Thhalv10020962m.g Eutrema salsugineum HOM05D001719 ORTHO05D008373 3.3e-17 91.3 70 65.7
Thecc.02G116700 Theobroma cacao HOM05D001719 ORTHO05D008373 3.3e-17 91.3 69 66.7
AL3G33070 Arabidopsis lyrata HOM05D001719 ORTHO05D008373 4.3e-17 90.9 70 65.7
Phvul.002G051800 Phaseolus vulgaris HOM05D001719 ORTHO05D008373 4.3e-17 90.9 69 69.6
TAR376G0701 Trochodendron aralioides HOM05D001719 ORTHO05D008373 4.3e-17 90.9 69 66.7
VMungo1215G0697 Vigna mungo HOM05D001719 ORTHO05D008373 4.3e-17 90.9 69 69.6
FAN20G1654 Fragaria x ananassa HOM05D001719 ORTHO05D008373 5.6e-17 90.5 70 65.7
Gohir.A03G182600 Gossypium hirsutum HOM05D001719 ORTHO05D008373 5.6e-17 90.5 69 66.7
Gohir.D02G204200 Gossypium hirsutum HOM05D001719 ORTHO05D008373 5.6e-17 90.5 69 66.7
THA.LOC104825385 Tarenaya hassleriana HOM05D001719 ORTHO05D008373 5.6e-17 90.5 69 65.2
Aa31LG8G6410 Aethionema arabicum HOM05D001719 ORTHO05D008373 7.3e-17 90.1 70 64.3
Migut.B00447 Erythranthe guttata HOM05D001719 ORTHO05D008373 7.3e-17 90.1 70 65.7
Gorai.005G231500 Gossypium raimondii HOM05D001719 ORTHO05D008373 7.3e-17 90.1 69 65.2
Atru.chr5.2358 Acer truncatum HOM05D001719 ORTHO05D008373 1.2e-16 89.4 69 66.7
CARHR095090 Cardamine hirsuta HOM05D001719 ORTHO05D008373 1.2e-16 89.4 70 65.7
FAN27G0426 Fragaria x ananassa HOM05D001719 ORTHO05D008373 1.2e-16 89.4 70 65.7
TWI14G0581 Tripterygium wilfordii HOM05D001719 ORTHO05D008373 1.2e-16 89.4 69 68.1
vmacro01964 Vaccinium macrocarpon HOM05D001719 ORTHO05D008373 1.2e-16 89.4 87 55.2
Duzib132G0579 Durio zibethinus HOM05D001719 ORTHO05D008373 2.1e-16 88.6 69 65.2
Lj1g0020489 Lotus japonicus HOM05D001719 ORTHO05D008373 2.1e-16 88.6 69 68.1
Lalb_Chr09g0319611 Lupinus albus HOM05D001719 ORTHO05D008373 2.1e-16 88.6 70 65.7
CDE05G1870 Ceratophyllum demersum HOM05D001719 ORTHO05D008373 2.8e-16 88.2 63 69.8
Nitab4.5_0008075g0010 Nicotiana tabacum HOM05D001719 ORTHO05D008373 2.8e-16 88.2 83 55.4
PGR031G2413 Punica granatum HOM05D001719 ORTHO05D008373 2.8e-16 88.2 69 65.2
Prupe.8G144200 Prunus persica HOM05D001719 ORTHO05D008373 3.6e-16 87.8 70 65.7
Lsat_1_v5_gn_0_39381 Lactuca sativa HOM05D001719 ORTHO05D008373 4.7e-16 87.4 70 64.3
MD10G1105300 Malus domestica HOM05D001719 ORTHO05D008373 6.2e-16 87.0 70 62.9
Hund12567 Selenicereus undatus HOM05D001719 ORTHO05D008373 6.2e-16 87.0 69 63.8
Sc12g0006760 Simmondsia chinensis HOM05D001719 ORTHO05D008373 8.1e-16 86.7 69 62.3
HPP92_009540 Vanilla planifolia HOM05D001719 ORTHO05D008373 8.1e-16 86.7 73 61.6
ATR1153G087 Amborella trichopoda HOM05D001719 ORTHO05D008373 1.1e-15 86.3 70 64.3
CANSAT25G2505 Cannabis sativa HOM05D001719 ORTHO05D008373 1.1e-15 86.3 69 65.2
Cfa004629 Carpinus fangiana HOM05D001719 ORTHO05D008373 1.1e-15 86.3 69 65.2
CsaV3_7G007820 Cucumis sativus L. HOM05D001719 ORTHO05D008373 1.1e-15 86.3 69 62.3
Os03g0202300 Oryza sativa ssp. japonica HOM05D001719 ORTHO05D008373 1.1e-15 86.3 69 63.8
Psat4g227560 Pisum sativum HOM05D001719 ORTHO05D008373 1.1e-15 86.3 69 65.2
Haze_10224 Corylus avellana HOM05D001719 ORTHO05D008373 1.4e-15 85.9 69 65.2
COL.COLO4_32517 Corchorus olitorius HOM05D001719 ORTHO05D008373 1.8e-15 85.5 69 62.3
Medtr5g005050 Medicago truncatula HOM05D001719 ORTHO05D008373 1.8e-15 85.5 69 65.2
arahy.Tifrunner.gnm1.ann1.EV0K0L Arachis hypogaea HOM05D001719 ORTHO05D008373 2.3e-15 85.1 69 63.8
arahy.Tifrunner.gnm1.ann1.W4JRHW Arachis hypogaea HOM05D001719 ORTHO05D008373 2.3e-15 85.1 69 63.8
Ca_24358_v3 Cicer arietinum L. HOM05D001719 ORTHO05D008373 2.3e-15 85.1 69 63.8
MELO3C018520.2 Cucumis melo HOM05D001719 ORTHO05D008373 2.3e-15 85.1 69 60.9
Zm00001eb007700 Zea mays HOM05D001719 ORTHO05D008373 6.8e-15 83.6 69 62.3
Sed0011640 Sechium edule HOM05D001719 ORTHO05D008373 8.9e-15 83.2 69 59.4
MD05G1099600 Malus domestica HOM05D001719 ORTHO05D008373 3.7e-13 77.8 70 60.0
AagrBONN_evm.TU.Sc2ySwM_340.471 Anthoceros agrestis HOM05D001719 ORTHO05D008373 6.4e-13 77.0 73 53.4
Mapoly0003s0260 Marchantia polymorpha HOM05D001719 ORTHO05D008373 1.1e-12 76.3 70 57.1
Pp3c13_1500 Physcomitrium patens HOM05D001719 ORTHO05D008373 4.1e-12 74.3 70 55.7
SMO266G0039 Selaginella moellendorffii HOM05D001719 ORTHO05D008373 2.7e-11 71.6 70 52.9
FAN24G2863 Fragaria x ananassa HOM05D001719 ORTHO05D008373 1.3e-10 69.3 99 44.4
CBR_g8391 Chara braunii HOM05D001719 ORTHO05D008373 1.5e-09 65.9 75 48.0
ClCG02G006820 Citrullus lanatus HOM05D001719 ORTHO05D008373 1.6e-08 62.4 124 33.9
Cre01.g028450 Chlamydomonas reinhardtii HOM05D001719 ORTHO05D008373 2.1e-08 62.0 57 54.4
PRCOL_00004724 Prasinoderma coloniale HOM05D001719 ORTHO05D008373 2.8e-08 61.6 73 45.2
MCO15G562 Micromonas commoda HOM05D001719 ORTHO05D008373 1.8e-07 58.9 89 41.6
AUR62034082 Chenopodium quinoa HOM05D001719 ORTHO05D008373 5.8e-06 53.9 32 78.1
MBI16_g01206_MAGBIO Magnolia biondii HOM05D001719 ORTHO05D008373 7.6e-06 53.5 32 75.0


User provided reference genes

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