Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 5.8e-62 240.7 123 100.0
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 9.6e-49 196.8 130 83.8
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 1.3e-48 196.4 128 82.0
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.8e-48 194.5 129 81.4
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 4.8e-48 194.5 129 82.2
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.1e-47 193.4 126 81.7
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 1.1e-47 193.4 126 81.7
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 1.1e-47 193.4 126 81.7
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 1.4e-47 193.0 130 80.8
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 1.4e-47 193.0 125 81.6
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.4e-47 192.2 129 79.8
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.4e-47 192.2 129 79.8
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 2.4e-47 192.2 129 81.4
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 5.3e-47 191.0 129 80.6
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 1.2e-46 189.9 129 79.1
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 1.2e-46 189.9 127 79.5
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.5e-46 189.5 129 78.3
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.5e-46 189.5 129 78.3
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 1.5e-46 189.5 129 79.1
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 2.6e-46 188.7 129 78.3
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 3.4e-46 188.3 126 80.2
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 4.5e-46 188.0 136 75.0
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 5.8e-46 187.6 129 76.7
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 1.3e-45 186.4 131 77.1
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 1.3e-45 186.4 129 78.3
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 3.8e-45 184.9 129 78.3
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 3.8e-45 184.9 129 76.7
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.9e-45 184.5 129 78.3
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 4.9e-45 184.5 127 78.0
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 6.4e-45 184.1 129 77.5
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 8.4e-45 183.7 125 77.6
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 8.4e-45 183.7 131 77.9
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.1e-44 183.3 125 77.6
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.4e-44 183.0 129 77.5
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 1.4e-44 183.0 131 76.3
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 1.9e-44 182.6 128 76.6
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 4.2e-44 181.4 140 74.3
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 4.2e-44 181.4 129 75.2
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 5.4e-44 181.0 131 75.6
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 7.1e-44 180.6 130 77.7
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 7.1e-44 180.6 128 78.1
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 9.3e-44 180.3 131 76.3
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 1.2e-43 179.9 129 74.4
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 1.2e-43 179.9 128 77.3
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 1.6e-43 179.5 127 74.8
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 2.7e-43 178.7 129 75.2
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.7e-43 178.7 128 74.2
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 2.7e-43 178.7 129 76.0
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 3.5e-43 178.3 129 76.0
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.5e-43 178.3 130 76.2
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 6.0e-43 177.6 124 76.6
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 7.9e-43 177.2 129 75.2
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 1.0e-42 176.8 127 74.8
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 1.8e-42 176.0 130 74.6
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 1.8e-42 176.0 124 76.6
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 1.8e-42 176.0 128 69.5
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 2.3e-42 175.6 130 74.6
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 2.3e-42 175.6 147 68.0
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 3.9e-42 174.9 129 73.6
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 5.1e-42 174.5 133 74.4
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 5.1e-42 174.5 124 75.8
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 6.7e-42 174.1 124 76.6
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 6.7e-42 174.1 124 76.6
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 6.7e-42 174.1 130 74.6
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 1.1e-41 173.3 122 75.4
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 1.5e-41 172.9 125 72.8
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 1.9e-41 172.6 132 70.5
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 1.9e-41 172.6 124 74.2
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 3.3e-41 171.8 124 75.0
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 4.3e-41 171.4 132 72.7
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 5.6e-41 171.0 124 74.2
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 9.6e-41 170.2 115 77.4
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 9.6e-41 170.2 122 73.8
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 1.3e-40 169.9 115 77.4
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 1.3e-40 169.9 132 70.5
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 1.6e-40 169.5 124 73.4
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 2.1e-40 169.1 126 70.6
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 6.2e-40 167.5 121 71.9
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 8.1e-40 167.2 124 72.6
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 8.1e-40 167.2 127 70.9
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 1.1e-39 166.8 124 74.2
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 1.1e-39 166.8 126 71.4
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 1.4e-39 166.4 126 72.2
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.4e-39 166.4 126 71.4
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.4e-39 166.4 126 72.2
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 4.0e-39 164.9 122 73.8
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 5.3e-39 164.5 112 75.9
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 6.9e-39 164.1 124 71.8
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 9.0e-39 163.7 124 71.0
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 1.2e-38 163.3 122 72.1
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 1.2e-38 163.3 126 69.8
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 3.4e-38 161.8 131 67.2
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 4.5e-38 161.4 129 64.3
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 7.6e-38 160.6 131 67.9
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 7.6e-38 160.6 104 77.9
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 1.7e-37 159.5 167 58.1
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 2.9e-37 158.7 128 64.1
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 3.8e-37 158.3 129 63.6
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 3.8e-37 158.3 129 63.6
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 3.8e-37 158.3 129 63.6
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 4.9e-37 157.9 109 69.7
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 4.9e-37 157.9 123 68.3
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 8.4e-37 157.1 120 68.3
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 8.4e-37 157.1 124 66.9
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 8.4e-37 157.1 119 67.2
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 8.4e-37 157.1 129 62.8
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 8.4e-37 157.1 104 76.0
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.1e-36 156.8 101 77.2
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 1.4e-36 156.4 122 69.7
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 1.9e-36 156.0 132 64.4
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 1.9e-36 156.0 132 64.4
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 1.9e-36 156.0 124 67.7
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 4.2e-36 154.8 120 67.5
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 1.6e-35 152.9 120 69.2
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 2.1e-35 152.5 99 75.8
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 3.5e-35 151.8 127 63.8
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 3.5e-35 151.8 123 63.4
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 2.3e-34 149.1 97 75.3
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 3.0e-34 148.7 158 57.6
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 3.0e-34 148.7 95 80.0
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 4.3e-33 144.8 113 67.3
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 5.6e-33 144.4 170 54.1
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.3e-32 143.3 112 64.3
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.8e-32 142.1 116 63.8
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.8e-32 142.1 92 78.3
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 1.1e-31 140.2 110 61.8
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.4e-31 139.0 107 63.6
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 2.4e-31 139.0 104 73.1
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 3.1e-31 138.7 162 52.5
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 5.3e-31 137.9 107 63.6
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 6.9e-31 137.5 129 65.1
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 7.6e-30 134.0 104 63.5
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 2.9e-29 132.1 87 75.9
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 8.4e-29 130.6 101 65.3
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 2.7e-27 125.6 117 58.1
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 4.6e-27 124.8 120 61.7
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 6.0e-27 124.4 96 71.9
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 1.8e-26 122.9 83 78.3
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 3.0e-26 122.1 120 61.7
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.5e-25 119.8 82 76.8
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 5.7e-25 117.9 91 68.1
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 9.7e-25 117.1 93 69.9
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 2.8e-24 115.5 122 54.9
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 4.5e-22 108.2 78 71.8
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 6.5e-21 104.4 76 69.7
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 1.4e-20 103.2 93 59.1
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.5e-20 102.4 63 77.8
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 3.2e-20 102.1 69 75.4
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 1.6e-19 99.8 105 49.5
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 7.9e-19 97.4 61 75.4
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.4e-18 96.7 95 55.8
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 2.8e-16 89.0 97 46.4
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 4.8e-16 88.2 120 49.2
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 1.8e-15 86.3 99 42.4
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 5.0e-13 78.2 123 40.7
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 5.0e-13 78.2 52 76.9
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.2e-08 62.8 38 78.9
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.7e-08 62.0 63 55.6
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 4.8e-08 61.6 47 72.3
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 1.4e-07 60.1 93 35.5


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