Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4073 Salvia bowleyana HOM05D005259 ORTHO05D006402 1.7e-174 615.9 310 100.0
MSTRG.24702 Avicennia marina HOM05D005259 ORTHO05D006402 1.7e-38 164.1 123 62.6
MSTRG.9924 Avicennia marina HOM05D005259 ORTHO05D006402 1.3e-33 147.9 134 57.5
Migut.N00239 Erythranthe guttata HOM05D005259 ORTHO05D006402 2.9e-33 146.7 129 57.4
Cc03_g04860 Coffea canephora HOM05D005259 ORTHO05D006402 7.8e-31 138.7 135 54.1
Manes.03G168800 Manihot esculenta HOM05D005259 ORTHO05D006402 7.8e-31 138.7 129 55.0
Dinv44634 Davidia involucrata HOM05D005259 ORTHO05D006402 3.3e-29 133.3 169 45.0
Hma1.2p1_0650F.1_g195420 Hydrangea macrophylla HOM05D005259 ORTHO05D006402 3.3e-29 133.3 129 55.8
GSVIVG01018119001 Vitis vinifera HOM05D005259 ORTHO05D006402 1.2e-28 131.3 129 50.4
Thecc.04G246200 Theobroma cacao HOM05D005259 ORTHO05D006402 2.1e-28 130.6 129 52.7
Dinv29911 Davidia involucrata HOM05D005259 ORTHO05D006402 3.6e-28 129.8 147 51.0
Oeu049793.2 Olea europaea HOM05D005259 ORTHO05D006402 1.4e-27 127.9 130 47.7
COL.COLO4_15792 Corchorus olitorius HOM05D005259 ORTHO05D006402 2.4e-27 127.1 129 49.6
CiPaw.01G190300 Carya illinoinensis HOM05D005259 ORTHO05D001287 3.1e-27 126.7 129 50.4
CSS0027429 Camellia sinensis var. sinensis HOM05D005259 ORTHO05D006402 6.8e-27 125.6 129 50.4
CSS0043582 Camellia sinensis var. sinensis HOM05D005259 ORTHO05D006402 6.8e-27 125.6 129 50.4
CAN.G1007.13 Capsicum annuum HOM05D005259 ORTHO05D006402 6.8e-27 125.6 129 48.8
Prupe.1G030800 Prunus persica HOM05D005259 ORTHO05D006402 6.8e-27 125.6 126 50.0
Actinidia04478 Actinidia chinensis HOM05D005259 ORTHO05D002253 1.2e-26 124.8 124 50.8
Cfa008379 Carpinus fangiana HOM05D005259 ORTHO05D006402 2.0e-26 124.0 127 48.0
Nn3g19539 Nelumbo nucifera HOM05D005259 ORTHO05D006402 2.0e-26 124.0 130 48.5
HanXRQChr03g0092361 Helianthus annuus HOM05D005259 ORTHO05D006402 2.6e-26 123.6 345 29.9
RcHm_v2.0_Chr4g0390511 Rosa chinensis HOM05D005259 ORTHO05D006402 2.6e-26 123.6 130 46.2
SGA_v2.0_scaffold88G27281 Striga asiatica HOM05D005259 ORTHO05D006402 2.6e-26 123.6 157 45.2
Peaxi162Scf00813g00016 Petunia axillaris HOM05D005259 ORTHO05D006402 3.4e-26 123.2 129 49.6
Actinidia40086 Actinidia chinensis HOM05D005259 ORTHO05D006402 4.4e-26 122.9 124 50.0
Ciclev10004215m.g Citrus clementina HOM05D005259 ORTHO05D006402 4.4e-26 122.9 130 48.5
Duzib052G0218 Durio zibethinus HOM05D005259 ORTHO05D006402 4.4e-26 122.9 130 49.2
Nitab4.5_0004798g0010 Nicotiana tabacum HOM05D005259 ORTHO05D006402 5.8e-26 122.5 146 47.3
Oeu003588.2 Olea europaea HOM05D005259 ORTHO05D006402 5.8e-26 122.5 139 46.8
Sopen09g032310 Solanum pennellii HOM05D005259 ORTHO05D006402 7.6e-26 122.1 129 48.1
Duzib151G0402 Durio zibethinus HOM05D005259 ORTHO05D006402 9.9e-26 121.7 138 46.4
TWI73G0531 Tripterygium wilfordii HOM05D005259 ORTHO05D006402 9.9e-26 121.7 129 49.6
Duzib212G1015 Durio zibethinus HOM05D005259 ORTHO05D006402 1.3e-25 121.3 138 46.4
Manes.15G037000 Manihot esculenta HOM05D005259 ORTHO05D006402 2.2e-25 120.6 129 50.4
Actinidia05464 Actinidia chinensis HOM05D005259 ORTHO05D006402 2.9e-25 120.2 129 46.5
Rhsim04G0190300 Rhododendron simsii HOM05D005259 ORTHO05D006402 2.9e-25 120.2 139 44.6
PGSC0003DMG400001126 Solanum tuberosum HOM05D005259 ORTHO05D006402 4.9e-25 119.4 129 46.5
Nitab4.5_0000525g0240 Nicotiana tabacum HOM05D005259 ORTHO05D006402 6.4e-25 119.0 152 44.1
FAN22G1888 Fragaria x ananassa HOM05D005259 ORTHO05D006402 1.4e-24 117.9 127 46.5
Actinidia08443 Actinidia chinensis HOM05D005259 ORTHO05D006402 1.9e-24 117.5 130 46.9
FvH4_4g02690 Fragaria vesca HOM05D005259 ORTHO05D006402 1.9e-24 117.5 130 44.6
FAN12G0451 Fragaria x ananassa HOM05D005259 ORTHO05D006402 4.1e-24 116.3 127 46.5
Gohir.D09G225300 Gossypium hirsutum HOM05D005259 ORTHO05D006402 5.4e-24 115.9 140 45.7
Atru.chr4.2229 Acer truncatum HOM05D005259 ORTHO05D006402 7.1e-24 115.5 129 47.3
Aa31LG5G3600 Aethionema arabicum HOM05D005259 ORTHO05D006402 7.1e-24 115.5 130 43.8
CiPaw.02G116300 Carya illinoinensis HOM05D005259 ORTHO05D006402 7.1e-24 115.5 128 46.1
Lsat_1_v5_gn_3_123200 Lactuca sativa HOM05D005259 ORTHO05D006402 7.1e-24 115.5 408 28.2
Potri.008G162500 Populus trichocarpa HOM05D005259 ORTHO05D006402 7.1e-24 115.5 129 47.3
Sabra08G0123900 Salix brachista HOM05D005259 ORTHO05D006402 9.2e-24 115.2 119 48.7
Lsat_1_v5_gn_5_72841 Lactuca sativa HOM05D005259 ORTHO05D006402 1.2e-23 114.8 156 40.4
Nn1g02609 Nelumbo nucifera HOM05D005259 ORTHO05D006402 1.6e-23 114.4 130 46.9
Gohir.A09G223300 Gossypium hirsutum HOM05D005259 ORTHO05D006402 2.1e-23 114.0 140 46.4
VMungo1215G2763 Vigna mungo HOM05D005259 ORTHO05D006402 2.1e-23 114.0 150 42.0
vmacro08412 Vaccinium macrocarpon HOM05D005259 ORTHO05D006402 2.7e-23 113.6 129 46.5
Gorai.006G246800 Gossypium raimondii HOM05D005259 ORTHO05D006402 3.5e-23 113.2 140 45.0
MBI04_g07579_MAGBIO Magnolia biondii HOM05D005259 ORTHO05D006402 3.5e-23 113.2 135 43.0
Phvul.002G042000 Phaseolus vulgaris HOM05D005259 ORTHO05D006402 3.5e-23 113.2 150 40.7
Eucgr.H03158 Eucalyptus grandis HOM05D005259 ORTHO05D006402 6.0e-23 112.5 128 45.3
Nitab4.5_0000036g0130 Nicotiana tabacum HOM05D005259 ORTHO05D006402 7.8e-23 112.1 124 47.6
THA.LOC104815985 Tarenaya hassleriana HOM05D000856 ORTHO05D001792 7.8e-23 112.1 201 36.3
Potri.010G076700 Populus trichocarpa HOM05D005259 ORTHO05D006402 1.0e-22 111.7 127 47.2
Medtr5g007040 Medicago truncatula HOM05D005259 ORTHO05D006402 1.3e-22 111.3 151 40.4
HanXRQChr15g0468851 Helianthus annuus HOM05D005259 ORTHO05D006402 1.7e-22 110.9 124 44.4
Sabra10G0032100 Salix brachista HOM05D005259 ORTHO05D006402 1.7e-22 110.9 127 46.5
MELO3C006469.2 Cucumis melo HOM05D005259 ORTHO05D006402 2.3e-22 110.5 127 43.3
HanXRQChr13g0424471 Helianthus annuus HOM05D005259 ORTHO05D006402 2.3e-22 110.5 128 47.7
Ca_24427_v3 Cicer arietinum L. HOM05D005259 ORTHO05D006402 3.0e-22 110.2 131 43.5
Sc13g0005040 Simmondsia chinensis HOM05D005259 ORTHO05D006402 3.9e-22 109.8 138 43.5
ECA240G1753 Erigeron canadensis HOM05D005259 ORTHO05D006402 5.1e-22 109.4 138 42.8
Sed0002321 Sechium edule HOM05D005259 ORTHO05D006402 5.1e-22 109.4 126 44.4
Cpa.g.sc58.48 Carica papaya HOM05D005259 ORTHO05D006402 6.6e-22 109.0 123 47.2
Cc00_g33140 Coffea canephora HOM05D005259 ORTHO05D006402 6.6e-22 109.0 108 52.8
ClCG05G004600 Citrullus lanatus HOM05D005259 ORTHO05D006402 8.7e-22 108.6 127 42.5
ECA233G4142 Erigeron canadensis HOM05D005259 ORTHO05D006402 8.7e-22 108.6 162 37.0
TAR362G0225 Trochodendron aralioides HOM05D005259 ORTHO05D006402 8.7e-22 108.6 130 43.1
CsaV3_3G012580 Cucumis sativus L. HOM05D005259 ORTHO05D006402 1.1e-21 108.2 125 43.2
Glyma.01G234600 Glycine max HOM05D005259 ORTHO05D006402 1.5e-21 107.8 150 38.7
MD13G1207300 Malus domestica HOM05D005259 ORTHO05D006402 1.5e-21 107.8 129 43.4
Psat2g189680 Pisum sativum HOM05D005259 ORTHO05D006402 1.9e-21 107.5 131 45.0
Aqoxy5G00317 Aquilegia oxysepala HOM05D005259 ORTHO05D006402 3.3e-21 106.7 128 43.8
Thhalv10003150m.g Eutrema salsugineum HOM05D005259 ORTHO05D006402 9.6e-21 105.1 138 41.3
LjContig00222g0005017 Lotus japonicus HOM05D005259 ORTHO05D006402 9.6e-21 105.1 129 45.0
Carub.0008s0502 Capsella rubella HOM05D005259 ORTHO05D006402 1.2e-20 104.8 135 43.0
TPR.G37888 Trifolium pratense HOM05D005259 ORTHO05D006402 1.2e-20 104.8 159 39.0
CARHR006260 Cardamine hirsuta HOM05D005259 ORTHO05D006402 2.1e-20 104.0 133 40.6
Nitab4.5_0000525g0230 Nicotiana tabacum HOM05D005259 ORTHO05D006402 2.8e-20 103.6 122 42.6
TAR633G1135 Trochodendron aralioides HOM05D005259 ORTHO05D006402 2.8e-20 103.6 198 33.8
BcaC06g31686 Brassica carinata HOM05D005259 ORTHO05D006402 3.6e-20 103.2 135 40.0
MD16G1208700 Malus domestica HOM05D005259 ORTHO05D006402 3.6e-20 103.2 128 41.4
PSO832G3620 Papaver somniferum HOM05D005259 ORTHO05D006402 3.6e-20 103.2 249 30.1
Glyma.11G008300 Glycine max HOM05D005259 ORTHO05D006402 4.7e-20 102.8 150 39.3
AT5G43630 Arabidopsis thaliana HOM05D005259 ORTHO05D006402 6.2e-20 102.4 136 40.4
arahy.Tifrunner.gnm1.ann1.SM0BS0 Arachis hypogaea HOM05D005259 ORTHO05D006402 8.1e-20 102.1 148 37.8
PSO210G6035 Papaver somniferum HOM05D005259 ORTHO05D006402 8.1e-20 102.1 249 29.7
FAN17G1158 Fragaria x ananassa HOM05D005259 ORTHO05D006402 1.1e-19 101.7 144 38.9
Sed0017180 Sechium edule HOM05D005259 ORTHO05D006402 1.4e-19 101.3 126 42.1
Os01g0775100 Oryza sativa ssp. japonica HOM05D005259 ORTHO05D006402 1.8e-19 100.9 125 42.4
Lalb_Chr09g0320051 Lupinus albus HOM05D005259 ORTHO05D006402 2.4e-19 100.5 143 39.2
Sp2g08420 Schrenkiella parvula HOM05D005259 ORTHO05D006402 3.1e-19 100.1 136 39.7
DCAR_002351 Daucus carota HOM05D005259 ORTHO05D006402 2.0e-18 97.4 129 41.1
BcaB07g30565 Brassica carinata HOM05D005259 ORTHO05D006402 3.4e-18 96.7 134 38.8
A06p47780 Brassica napus HOM05D005259 ORTHO05D006402 1.3e-17 94.7 136 38.2
BraA06t27646Z Brassica rapa HOM05D005259 ORTHO05D006402 1.3e-17 94.7 136 38.2
BcaC06g34639 Brassica carinata HOM05D005259 ORTHO05D006402 2.9e-17 93.6 162 34.6
C07p26220 Brassica napus HOM05D005259 ORTHO05D006402 2.9e-17 93.6 162 34.6
BolC7t43150H Brassica oleracea HOM05D005259 ORTHO05D006402 2.9e-17 93.6 162 34.6
CDE07G1991 Ceratophyllum demersum HOM05D000989 ORTHO05D006402 2.9e-17 93.6 128 39.1
Lj6A656T71 Lonicera japonica HOM05D005259 ORTHO05D006402 3.2e-16 90.1 93 53.8
Migut.G00437 Erythranthe guttata HOM05D005259 ORTHO05D006402 1.6e-15 87.8 101 51.5
ATR0665G554 Amborella trichopoda HOM05D005259 ORTHO05D006402 2.1e-15 87.4 124 35.5
Nitab4.5_0004798g0040 Nicotiana tabacum HOM05D005259 ORTHO05D006402 4.6e-15 86.3 153 35.9
QL06p015741 Quercus lobata HOM05D005259 ORTHO05D006402 4.6e-15 86.3 96 50.0
HPP92_018440 Vanilla planifolia HOM05D005259 ORTHO05D006402 1.9e-13 80.9 124 40.3
Cc00_g10240 Coffea canephora HOM05D005259 ORTHO05D006402 1.3e-12 78.2 61 60.7
Potri.008G162150 Populus trichocarpa HOM05D005259 ORTHO05D006402 9.9e-10 68.6 87 44.8
SMO111G0058 Selaginella moellendorffii HOM05D007564 ORTHO05D013712 3.8e-09 66.6 122 34.4
Solyc09g083390.3 Solanum lycopersicum HOM05D005259 ORTHO05D006402 1.2e-07 61.6 71 46.5
SMO205G0008 Selaginella moellendorffii HOM05D007564 ORTHO05D009975 2.1e-07 60.8 95 38.9
SMO276G0057 Selaginella moellendorffii HOM05D007564 ORTHO05D009975 2.7e-07 60.5 121 33.9
TPR.G17184 Trifolium pratense HOM05D005259 ORTHO05D006402 3.5e-07 60.1 59 47.5
SMO205G0005 Selaginella moellendorffii HOM05D007564 ORTHO05D013712 2.3e-06 57.4 100 31.0
Zm00001eb151720 Zea mays HOM05D005259 ORTHO05D006402 5.1e-06 56.2 87 36.8


User provided reference genes

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