Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 5.0e-148 527.7 258 100.0
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.5e-64 250.4 142 90.8
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 6.7e-28 128.6 132 57.6
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 8.8e-28 128.3 132 55.3
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 2.2e-26 123.6 131 55.0
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 3.7e-26 122.9 143 51.0
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 3.1e-25 119.8 109 59.6
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 4.1e-25 119.4 137 50.4
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 4.1e-25 119.4 109 57.8
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 7.0e-25 118.6 137 50.4
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.3e-23 114.4 137 48.9
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.3e-23 114.4 137 48.9
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 2.2e-23 113.6 130 52.3
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.9e-23 113.2 136 49.3
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 6.5e-23 112.1 132 50.0
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.1e-22 111.3 121 52.1
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 2.5e-22 110.2 103 56.3
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 3.2e-22 109.8 137 48.2
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 4.2e-22 109.4 137 47.4
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 4.2e-22 109.4 137 50.4
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 5.5e-22 109.0 137 48.2
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 5.5e-22 109.0 109 53.2
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 7.2e-22 108.6 131 49.6
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 7.2e-22 108.6 159 44.0
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 9.4e-22 108.2 131 49.6
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 1.2e-21 107.8 124 50.0
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 2.1e-21 107.1 132 47.0
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 2.1e-21 107.1 133 48.1
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 2.1e-21 107.1 133 48.1
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 2.7e-21 106.7 122 51.6
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 3.6e-21 106.3 132 47.0
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 3.6e-21 106.3 131 46.6
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.6e-21 106.3 159 42.8
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 4.7e-21 105.9 131 48.1
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 6.1e-21 105.5 123 48.8
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 6.1e-21 105.5 131 48.1
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 8.0e-21 105.1 124 50.8
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 8.0e-21 105.1 132 46.2
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 8.0e-21 105.1 123 48.8
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 8.0e-21 105.1 132 47.0
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.0e-20 104.8 103 56.3
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 1.0e-20 104.8 129 48.8
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.4e-20 104.4 123 48.8
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 1.4e-20 104.4 131 47.3
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 1.8e-20 104.0 131 46.6
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.8e-20 104.0 132 46.2
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.3e-20 103.6 132 46.2
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 2.3e-20 103.6 111 53.2
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 2.3e-20 103.6 111 53.2
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 3.0e-20 103.2 132 44.7
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.0e-20 103.2 158 43.0
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 3.0e-20 103.2 137 45.3
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 3.0e-20 103.2 133 44.4
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 4.0e-20 102.8 109 52.3
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.0e-20 102.8 159 42.8
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 5.2e-20 102.4 103 52.4
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 8.8e-20 101.7 122 49.2
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 8.8e-20 101.7 132 44.7
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.5e-19 100.9 140 46.4
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 1.5e-19 100.9 132 44.7
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.0e-19 100.5 132 49.2
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 2.6e-19 100.1 121 47.9
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 3.3e-19 99.8 66 66.7
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 4.4e-19 99.4 132 46.2
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 4.4e-19 99.4 91 56.0
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 7.5e-19 98.6 132 46.2
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 9.7e-19 98.2 131 45.8
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 1.3e-18 97.8 100 54.0
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 1.7e-18 97.4 131 45.0
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 1.7e-18 97.4 131 45.0
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.7e-18 97.4 90 52.2
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 1.7e-18 97.4 149 42.3
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 2.8e-18 96.7 131 44.3
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 3.7e-18 96.3 131 44.3
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 3.7e-18 96.3 131 44.3
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 3.7e-18 96.3 131 44.3
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 4.8e-18 95.9 132 45.5
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 4.8e-18 95.9 131 44.3
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 4.8e-18 95.9 131 44.3
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 4.8e-18 95.9 131 44.3
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 4.8e-18 95.9 131 44.3
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 4.8e-18 95.9 66 66.7
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 8.2e-18 95.1 137 43.8
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 8.2e-18 95.1 121 46.3
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 1.8e-17 94.0 136 44.1
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 2.4e-17 93.6 109 48.6
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 4.1e-17 92.8 128 44.5
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 5.3e-17 92.4 103 52.4
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 7.0e-17 92.0 131 42.7
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 9.1e-17 91.7 72 58.3
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.2e-16 91.3 131 42.7
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 1.2e-16 91.3 180 35.6
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 1.2e-16 91.3 131 43.5
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 1.2e-16 91.3 132 43.2
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 1.6e-16 90.9 131 42.7
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 1.6e-16 90.9 104 48.1
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.6e-16 90.9 67 64.2
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 3.5e-16 89.7 132 42.4
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 4.5e-16 89.4 104 51.0
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 4.5e-16 89.4 104 49.0
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 5.9e-16 89.0 64 65.6
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 1.7e-15 87.4 132 40.9
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 3.8e-15 86.3 128 43.0
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 8.5e-15 85.1 132 42.4
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 1.1e-14 84.7 132 41.7
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 1.2e-13 81.3 132 41.7
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 3.6e-13 79.7 116 42.2
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 1.4e-12 77.8 116 43.1
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 1.2e-11 74.7 104 39.4
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.5e-11 74.3 100 43.0
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 6.3e-10 68.9 67 50.7
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 1.1e-09 68.2 66 51.5
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 1.4e-09 67.8 110 35.5
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 4.1e-09 66.2 66 53.0
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.4e-09 65.9 123 38.2
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 9.1e-09 65.1 66 45.5
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 2.0e-08 63.9 81 44.4
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.7e-08 63.5 104 36.5
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.7e-08 63.5 104 36.5
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 6.5e-07 58.9 71 46.5
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.5e-06 57.0 100 39.0
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 9.4e-06 55.1 38 63.2
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 9.4e-06 55.1 53 49.1


User provided reference genes

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