Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0325 Salvia bowleyana HOM05D005254 ORTHO05D007557 5.4e-133 477.6 234 100.0
SalBow2G0161 Salvia bowleyana HOM05D005254 ORTHO05D355854 4.7e-121 438.0 238 92.4
SalBow2G1139 Salvia bowleyana HOM05D005254 ORTHO05D007557 2.0e-103 379.4 298 68.8
Migut.N00932 Erythranthe guttata HOM05D005254 ORTHO05D007557 8.1e-81 304.3 284 56.0
MSTRG.17387 Avicennia marina HOM05D005254 ORTHO05D007557 1.9e-74 283.1 284 52.5
GSVIVG01028140001 Vitis vinifera HOM05D005254 ORTHO05D007557 2.2e-70 269.6 289 48.1
Dinv10118 Davidia involucrata HOM05D005254 ORTHO05D007557 3.5e-68 262.3 289 46.7
Peaxi162Scf00058g02631 Petunia axillaris HOM05D005254 ORTHO05D007557 3.5e-68 262.3 304 46.1
CAN.G1280.35 Capsicum annuum HOM05D005254 ORTHO05D007557 6.0e-68 261.5 302 46.0
Nitab4.5_0007407g0050 Nicotiana tabacum HOM05D005254 ORTHO05D007557 1.0e-67 260.8 304 47.0
Nitab4.5_0000363g0240 Nicotiana tabacum HOM05D005254 ORTHO05D007557 1.8e-67 260.0 304 46.7
Solyc06g009530.3 Solanum lycopersicum HOM05D005254 ORTHO05D007557 3.9e-67 258.8 304 45.1
Sopen06g004190 Solanum pennellii HOM05D005254 ORTHO05D007557 1.5e-66 256.9 304 44.7
Lj1C15G16 Lonicera japonica HOM05D005254 ORTHO05D007557 2.5e-66 256.1 304 45.4
Oeu049924.2 Olea europaea HOM05D005254 ORTHO05D007557 3.3e-66 255.8 241 53.9
CSS0023845 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 8.1e-65 251.1 289 45.7
CSS0038291 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 8.1e-65 251.1 289 45.7
Cc01_g21580 Coffea canephora HOM05D005254 ORTHO05D007557 8.1e-65 251.1 289 46.7
Rhsim01G0292000 Rhododendron simsii HOM05D005254 ORTHO05D007557 1.8e-64 250.0 289 46.0
CiPaw.07G119100 Carya illinoinensis HOM05D005254 ORTHO05D007557 3.1e-64 249.2 304 43.1
Haze_05067 Corylus avellana HOM05D005254 ORTHO05D007557 3.1e-64 249.2 289 46.4
SGA_v2.0_scaffold6G03340 Striga asiatica HOM05D005254 ORTHO05D007557 1.2e-63 247.3 305 44.6
vmacro15104 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 1.5e-63 246.9 282 47.2
TAR633G1480 Trochodendron aralioides HOM05D005254 ORTHO05D007557 2.6e-63 246.1 289 44.6
Atru.chr5.974 Acer truncatum HOM05D005254 ORTHO05D007557 3.4e-63 245.7 288 44.4
Hma1.2p1_0486F.1_g163430 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 3.4e-63 245.7 289 44.3
Hma1.2p1_0486F.1_g163440 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 3.4e-63 245.7 289 44.3
QL12p019422 Quercus lobata HOM05D005254 ORTHO05D007557 4.5e-63 245.4 289 44.6
arahy.Tifrunner.gnm1.ann1.AYF5PU Arachis hypogaea HOM05D005254 ORTHO05D007557 5.8e-63 245.0 286 44.1
Duzib133G0392 Durio zibethinus HOM05D005254 ORTHO05D007557 7.6e-63 244.6 286 44.1
Medtr7g109730 Medicago truncatula HOM05D005254 ORTHO05D007557 1.0e-62 244.2 286 45.1
Cfa005773 Carpinus fangiana HOM05D005254 ORTHO05D007557 1.7e-62 243.4 289 45.3
Glyma.19G217500 Glycine max HOM05D005254 ORTHO05D007557 1.7e-62 243.4 286 46.2
Lalb_Chr04g0260001 Lupinus albus HOM05D005254 ORTHO05D007557 1.7e-62 243.4 286 44.4
HanXRQChr01g0000761 Helianthus annuus HOM05D005254 ORTHO05D007557 2.9e-62 242.7 303 43.6
arahy.Tifrunner.gnm1.ann1.72UXVZ Arachis hypogaea HOM05D005254 ORTHO05D007557 3.8e-62 242.3 286 44.1
MD17G1277500 Malus domestica HOM05D005254 ORTHO05D007557 3.8e-62 242.3 303 41.9
Psat0s425g0240 Pisum sativum HOM05D005254 ORTHO05D007557 3.8e-62 242.3 284 44.4
TPR.G4086 Trifolium pratense HOM05D005254 ORTHO05D007557 3.8e-62 242.3 286 45.1
Actinidia25861 Actinidia chinensis HOM05D005254 ORTHO05D007557 6.5e-62 241.5 279 45.2
Gohir.A08G119800 Gossypium hirsutum HOM05D005254 ORTHO05D007557 1.4e-61 240.4 285 42.8
Gohir.D08G140700 Gossypium hirsutum HOM05D005254 ORTHO05D007557 1.9e-61 240.0 285 43.2
Gorai.004G144800 Gossypium raimondii HOM05D005254 ORTHO05D007557 1.9e-61 240.0 285 43.2
Potri.002G194000 Populus trichocarpa HOM05D005254 ORTHO05D007557 1.9e-61 240.0 289 42.6
Ca_09219_v3 Cicer arietinum L. HOM05D005254 ORTHO05D007557 3.2e-61 239.2 286 45.1
Prupe.3G010500 Prunus persica HOM05D005254 ORTHO05D007557 3.2e-61 239.2 289 43.6
Cpa.g.sc18.77 Carica papaya HOM05D005254 ORTHO05D007557 5.5e-61 238.4 289 43.3
Lsat_1_v5_gn_5_191360 Lactuca sativa HOM05D005254 ORTHO05D007557 5.5e-61 238.4 304 41.1
DCAR_018280 Daucus carota HOM05D005254 ORTHO05D007557 7.1e-61 238.0 289 43.6
MBI18_g03638_MAGBIO Magnolia biondii HOM05D005254 ORTHO05D007557 1.2e-60 237.3 289 45.3
CANSAT25G1517 Cannabis sativa HOM05D005254 ORTHO05D007557 1.6e-60 236.9 288 44.8
FAN26G2945 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.6e-60 236.9 289 43.3
Eucgr.H00999 Eucalyptus grandis HOM05D005254 ORTHO05D007557 2.1e-60 236.5 285 42.8
Glyma.03G220700 Glycine max HOM05D005254 ORTHO05D007557 2.1e-60 236.5 286 45.8
Sc17g0000380 Simmondsia chinensis HOM05D005254 ORTHO05D007557 2.1e-60 236.5 287 43.2
ATR0693G194 Amborella trichopoda HOM05D005254 ORTHO05D007557 3.5e-60 235.7 289 43.3
Ciclev10018561m.g Citrus clementina HOM05D005254 ORTHO05D007557 3.5e-60 235.7 289 43.3
RcHm_v2.0_Chr3g0487381 Rosa chinensis HOM05D005254 ORTHO05D007557 4.6e-60 235.3 289 42.9
PGR083G2196 Punica granatum HOM05D005254 ORTHO05D007557 7.9e-60 234.6 275 42.9
CsaV3_7G030070 Cucumis sativus L. HOM05D005254 ORTHO05D007557 1.3e-59 233.8 276 44.9
Manes.05G014200 Manihot esculenta HOM05D005254 ORTHO05D007557 1.8e-59 233.4 289 43.6
VMungo1383G0540 Vigna mungo HOM05D005254 ORTHO05D007557 1.8e-59 233.4 286 45.1
FvH4_1g27060 Fragaria vesca HOM05D005254 ORTHO05D007557 2.3e-59 233.0 290 42.8
ECA248G2092 Erigeron canadensis HOM05D005254 ORTHO05D007557 5.1e-59 231.9 304 40.5
Lj1g0000440 Lotus japonicus HOM05D005254 ORTHO05D007557 5.1e-59 231.9 286 42.3
MD09G1284300 Malus domestica HOM05D005254 ORTHO05D007557 5.1e-59 231.9 301 41.2
THA.LOC104802150 Tarenaya hassleriana HOM05D005254 ORTHO05D007557 5.1e-59 231.9 284 42.3
Sed0001136 Sechium edule HOM05D005254 ORTHO05D007557 6.7e-59 231.5 276 44.6
Thecc.01G315800 Theobroma cacao HOM05D005254 ORTHO05D007557 6.7e-59 231.5 286 42.7
Sed0015859 Sechium edule HOM05D005254 ORTHO05D007557 1.1e-58 230.7 276 43.8
FAN19G0333 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.9e-58 229.9 305 41.0
Aa31LG10G16290 Aethionema arabicum HOM05D005254 ORTHO05D007557 3.3e-58 229.2 282 42.9
COL.COLO4_23211 Corchorus olitorius HOM05D005254 ORTHO05D007557 3.3e-58 229.2 298 40.3
ClCG09G004990 Citrullus lanatus HOM05D005254 ORTHO05D007557 5.7e-58 228.4 276 43.5
MELO3C015914.2 Cucumis melo HOM05D005254 ORTHO05D007557 5.7e-58 228.4 275 44.0
Lalb_Chr15g0078051 Lupinus albus HOM05D005254 ORTHO05D007557 7.4e-58 228.0 286 41.3
CARHR172690 Cardamine hirsuta HOM05D005254 ORTHO05D007557 9.6e-58 227.6 299 41.5
Nn3g21729 Nelumbo nucifera HOM05D005254 ORTHO05D007557 1.6e-57 226.9 289 43.6
EL10As5g23556 Beta vulgaris HOM05D005254 ORTHO05D007557 2.8e-57 226.1 288 40.6
AT3G62360 Arabidopsis thaliana HOM05D005254 ORTHO05D007557 3.7e-57 225.7 298 41.3
Carub.0005s2908 Capsella rubella HOM05D005254 ORTHO05D007557 4.8e-57 225.3 299 40.8
HPP92_011729 Vanilla planifolia HOM05D005254 ORTHO05D007557 4.8e-57 225.3 278 44.2
Phvul.001G214200 Phaseolus vulgaris HOM05D005254 ORTHO05D007557 6.3e-57 224.9 286 43.4
BcaC07g40720 Brassica carinata HOM05D005254 ORTHO05D007557 8.2e-57 224.6 299 41.1
BolC8t51301H Brassica oleracea HOM05D005254 ORTHO05D007557 8.2e-57 224.6 299 41.1
TWI36G0433 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 8.2e-57 224.6 304 41.8
AL5G45120 Arabidopsis lyrata HOM05D005254 ORTHO05D007557 1.1e-56 224.2 298 41.3
Aqoxy5G02683 Aquilegia oxysepala HOM05D005254 ORTHO05D007557 5.3e-56 221.9 288 41.3
Sp5g01040 Schrenkiella parvula HOM05D005254 ORTHO05D007557 5.3e-56 221.9 299 42.5
Hund09648 Selenicereus undatus HOM05D005254 ORTHO05D007557 5.3e-56 221.9 281 41.3
A09p54350 Brassica napus HOM05D005254 ORTHO05D007557 4.5e-55 218.8 299 40.5
BraA09t40847Z Brassica rapa HOM05D005254 ORTHO05D007557 4.5e-55 218.8 299 40.5
AUR62043231 Chenopodium quinoa HOM05D005254 ORTHO05D007557 1.0e-54 217.6 294 39.1
PSO357G0205 Papaver somniferum HOM05D005254 ORTHO05D007557 1.3e-54 217.2 285 42.5
AUR62032507 Chenopodium quinoa HOM05D005254 ORTHO05D007557 1.7e-54 216.9 294 38.8
PSO170G0810 Papaver somniferum HOM05D005254 ORTHO05D007557 2.9e-54 216.1 285 42.1
C08p37230 Brassica napus HOM05D005254 ORTHO05D007557 3.8e-54 215.7 299 40.5
Ah.02g112410 Amaranthus hybridus HOM05D005254 ORTHO05D007557 1.1e-53 214.2 292 39.0
Thhalv10005752m.g Eutrema salsugineum HOM05D005254 ORTHO05D007557 9.3e-53 211.1 299 39.8
Actinidia20982 Actinidia chinensis HOM05D005254 ORTHO05D007557 4.6e-52 208.8 272 41.9
unitig_22.g6696 Utricularia gibba HOM05D005254 ORTHO05D007557 7.9e-52 208.0 246 45.5
FAN23G1174 Fragaria x ananassa HOM05D005254 ORTHO05D007557 3.3e-50 202.6 290 39.7
CDE01G0437 Ceratophyllum demersum HOM05D005254 ORTHO05D007557 4.8e-49 198.7 274 39.8
SEGI_30263 Sequoiadendron giganteum HOM05D005254 ORTHO05D007557 1.8e-48 196.8 282 37.9
Sabra02G0162400 Salix brachista HOM05D005254 ORTHO05D007557 3.8e-46 189.1 349 33.8
Zm00001eb340350 Zea mays HOM05D005254 ORTHO05D007557 5.0e-46 188.7 287 35.9
FAN28G1559 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.0e-43 181.0 308 35.7
Mapoly0002s0320 Marchantia polymorpha HOM05D005254 ORTHO05D007557 8.8e-43 177.9 311 33.8
SMO145G0116 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 1.2e-39 167.5 281 32.4
Pp3c14_26400 Physcomitrium patens HOM05D005254 ORTHO05D007557 5.0e-38 162.2 316 31.6
Oeu031896.1 Olea europaea HOM05D005254 ORTHO05D007557 7.2e-37 158.3 112 60.7
BcaC07g40722 Brassica carinata HOM05D005254 ORTHO05D007557 9.4e-37 157.9 282 35.5
AagrBONN_evm.TU.Sc2ySwM_344.3074 Anthoceros agrestis HOM05D005254 ORTHO05D007557 5.7e-34 148.7 286 31.5
SMO145G0011 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 7.4e-34 148.3 283 30.0
BcaC07g42749 Brassica carinata HOM05D005254 ORTHO05D007557 8.2e-33 144.8 145 48.3
C06p28230 Brassica napus HOM05D005254 ORTHO05D007557 1.0e-30 137.9 300 32.7
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 1.0e-30 137.9 300 32.7
BcaC08g45196 Brassica carinata HOM05D005254 ORTHO05D007557 2.2e-30 136.7 220 38.6
FAN23G1589 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.6e-28 130.6 93 64.5
CBR_g12556 Chara braunii HOM05D005254 ORTHO05D007557 1.2e-12 77.8 92 43.5
Os01g0300600 Oryza sativa ssp. japonica HOM05D005254 ORTHO05D007557 9.2e-08 61.6 51 54.9
BcaC08g45197 Brassica carinata HOM05D005254 ORTHO05D007557 8.6e-06 55.1 55 47.3


User provided reference genes

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