Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 9.9e-92 340.1 173 100.0
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 3.0e-64 248.8 142 90.8
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 5.9e-20 101.7 105 56.2
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 6.5e-19 98.2 74 67.6
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 3.6e-17 92.4 105 52.4
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 1.4e-16 90.5 80 61.2
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.8e-16 90.1 74 62.2
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.8e-16 90.1 74 62.2
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 2.3e-16 89.7 74 62.2
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 3.0e-16 89.4 74 62.2
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 6.8e-16 88.2 74 60.8
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 6.8e-16 88.2 74 60.8
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.5e-15 87.0 74 60.8
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.5e-15 87.0 74 62.2
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 3.4e-15 85.9 74 62.2
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 4.4e-15 85.5 74 59.5
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 5.7e-15 85.1 74 59.5
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 5.7e-15 85.1 74 59.5
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 7.5e-15 84.7 95 51.6
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 9.8e-15 84.3 74 59.5
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 1.3e-14 84.0 70 61.4
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 1.3e-14 84.0 70 61.4
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 6.3e-14 81.6 74 62.2
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 8.3e-14 81.3 113 41.6
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 8.3e-14 81.3 92 54.3
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.1e-13 80.9 76 57.9
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 1.1e-13 80.9 76 57.9
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 1.4e-13 80.5 78 53.8
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.4e-13 80.5 104 49.0
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 1.8e-13 80.1 78 53.8
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 3.1e-13 79.3 74 58.1
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 3.1e-13 79.3 78 52.6
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 3.1e-13 79.3 73 57.5
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 4.1e-13 79.0 114 40.4
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.0e-13 78.2 103 47.6
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.0e-13 78.2 103 47.6
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.0e-13 78.2 104 47.1
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 9.1e-13 77.8 74 55.4
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 9.1e-13 77.8 113 41.6
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 9.1e-13 77.8 92 51.1
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 9.1e-13 77.8 82 56.1
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 1.2e-12 77.4 74 55.4
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 1.2e-12 77.4 74 55.4
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.2e-12 77.4 113 41.6
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 1.2e-12 77.4 78 50.0
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 1.6e-12 77.0 113 41.6
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 2.0e-12 76.6 74 55.4
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 2.0e-12 76.6 75 53.3
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 2.7e-12 76.3 112 40.2
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 2.7e-12 76.3 74 54.1
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 3.5e-12 75.9 74 54.1
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 4.5e-12 75.5 77 51.9
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 5.9e-12 75.1 73 56.2
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 5.9e-12 75.1 74 55.4
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 1.0e-11 74.3 74 52.7
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 1.3e-11 73.9 77 53.2
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.3e-11 73.9 98 43.9
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.3e-11 73.9 112 42.0
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 1.7e-11 73.6 68 55.9
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 1.7e-11 73.6 110 40.0
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 1.7e-11 73.6 78 53.8
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 2.2e-11 73.2 105 42.9
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 2.9e-11 72.8 73 53.4
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 3.8e-11 72.4 77 51.9
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 3.8e-11 72.4 105 43.8
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 3.8e-11 72.4 73 53.4
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 5.0e-11 72.0 105 42.9
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 1.1e-10 70.9 73 49.3
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 1.1e-10 70.9 105 43.8
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.5e-10 70.5 74 52.7
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 1.5e-10 70.5 153 34.0
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 2.5e-10 69.7 74 54.1
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 2.5e-10 69.7 105 41.9
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 2.5e-10 69.7 96 43.8
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 3.2e-10 69.3 74 51.4
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 3.2e-10 69.3 91 46.2
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 4.2e-10 68.9 83 50.6
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 4.2e-10 68.9 71 54.9
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 5.5e-10 68.6 74 52.7
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 7.2e-10 68.2 75 49.3
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 7.2e-10 68.2 75 49.3
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 7.2e-10 68.2 105 42.9
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 9.4e-10 67.8 105 42.9
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 9.4e-10 67.8 74 51.4
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 9.4e-10 67.8 75 49.3
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 1.2e-09 67.4 105 41.9
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.2e-09 67.4 75 48.0
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 1.2e-09 67.4 77 49.4
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 1.6e-09 67.0 75 48.0
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 2.1e-09 66.6 75 48.0
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 2.1e-09 66.6 75 48.0
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 2.1e-09 66.6 75 48.0
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 2.1e-09 66.6 75 48.0
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 2.1e-09 66.6 74 50.0
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 2.1e-09 66.6 105 41.0
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 2.1e-09 66.6 70 50.0
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 2.1e-09 66.6 93 43.0
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 3.6e-09 65.9 75 46.7
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 3.6e-09 65.9 75 46.7
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 4.7e-09 65.5 105 41.0
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.0e-08 64.3 75 45.3
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 1.8e-08 63.5 66 50.0
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 2.3e-08 63.2 75 45.3
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 3.4e-07 59.3 76 42.1
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 2.2e-06 56.6 119 34.5
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.7e-06 55.8 113 37.2
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 3.7e-06 55.8 74 40.5
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 3.7e-06 55.8 65 50.8
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 3.7e-06 55.8 99 35.4
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 4.9e-06 55.5 86 38.4
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 6.3e-06 55.1 78 42.3


User provided reference genes

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