Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.9e-88 328.9 223 100.0
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.7e-86 322.4 223 98.7
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.8e-85 319.7 223 98.2
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.8e-85 317.4 223 97.8
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.5e-84 316.6 223 89.2
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 1.9e-79 299.7 225 85.3
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 1.8e-77 293.1 223 91.5
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 8.8e-77 290.8 223 72.6
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 7.5e-76 287.7 225 73.3
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 9.8e-76 287.3 229 83.4
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 2.2e-75 286.2 223 72.6
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 2.8e-75 285.8 230 70.9
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 8.3e-75 284.3 231 71.9
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 8.3e-75 284.3 231 71.9
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 8.3e-75 284.3 229 72.9
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 8.3e-75 284.3 223 68.2
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 8.3e-75 284.3 231 76.6
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 1.1e-74 283.9 227 68.7
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 2.4e-74 282.7 230 70.4
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 3.1e-74 282.3 228 77.6
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 4.1e-74 282.0 230 71.3
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 4.1e-74 282.0 228 74.1
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 5.4e-74 281.6 224 74.1
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 7.0e-74 281.2 230 74.8
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 7.0e-74 281.2 228 70.2
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 1.6e-73 280.0 230 74.3
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 3.5e-73 278.9 228 67.5
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 4.5e-73 278.5 228 74.6
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 5.9e-73 278.1 230 75.2
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 5.9e-73 278.1 228 75.4
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 7.7e-73 277.7 229 75.5
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 7.7e-73 277.7 228 73.2
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 7.7e-73 277.7 231 71.9
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 1.0e-72 277.3 229 75.5
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 1.0e-72 277.3 232 73.7
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 1.0e-72 277.3 228 64.9
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 1.3e-72 276.9 229 77.3
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 1.7e-72 276.6 230 77.8
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 1.7e-72 276.6 229 79.0
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 2.3e-72 276.2 230 73.5
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 2.3e-72 276.2 228 81.1
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 2.3e-72 276.2 231 73.2
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 2.3e-72 276.2 231 75.8
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 2.9e-72 275.8 231 73.2
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 3.8e-72 275.4 246 65.0
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 3.8e-72 275.4 228 69.3
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 3.8e-72 275.4 231 82.3
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 5.0e-72 275.0 231 75.8
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 5.0e-72 275.0 226 80.5
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 6.6e-72 274.6 235 70.2
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 8.6e-72 274.2 228 66.7
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 8.6e-72 274.2 228 70.6
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 1.1e-71 273.9 229 74.2
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 1.1e-71 273.9 220 80.0
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 1.1e-71 273.9 233 73.8
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 1.5e-71 273.5 230 73.0
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 1.5e-71 273.5 230 69.1
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 1.5e-71 273.5 233 81.5
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 1.5e-71 273.5 233 81.5
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 1.9e-71 273.1 230 70.0
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 3.3e-71 272.3 233 69.5
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 3.3e-71 272.3 232 77.6
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 3.3e-71 272.3 232 79.7
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 3.3e-71 272.3 227 76.7
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 4.3e-71 271.9 229 80.3
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 4.3e-71 271.9 232 81.0
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 4.3e-71 271.9 227 80.6
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 5.6e-71 271.6 230 72.2
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 7.3e-71 271.2 231 68.4
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 1.2e-70 270.4 231 68.0
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.6e-70 270.0 230 66.1
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 2.8e-70 269.2 233 71.7
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 2.8e-70 269.2 231 71.4
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.6e-70 268.9 233 72.1
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 3.6e-70 268.9 230 69.1
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 6.1e-70 268.1 232 68.5
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 6.1e-70 268.1 232 68.5
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 6.1e-70 268.1 230 72.6
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 8.0e-70 267.7 233 69.5
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 8.0e-70 267.7 233 69.5
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 8.0e-70 267.7 230 63.0
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 8.0e-70 267.7 229 68.1
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 8.0e-70 267.7 232 69.0
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 1.0e-69 267.3 231 67.5
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 1.0e-69 267.3 232 68.5
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 1.0e-69 267.3 232 70.7
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.0e-69 267.3 232 70.7
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.0e-69 267.3 232 67.7
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 1.0e-69 267.3 229 80.3
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 1.4e-69 266.9 228 69.7
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.4e-69 266.9 231 68.0
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 1.4e-69 266.9 243 68.3
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 1.4e-69 266.9 232 70.7
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 1.4e-69 266.9 232 69.0
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 1.4e-69 266.9 230 68.3
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 1.8e-69 266.5 230 69.6
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.8e-69 266.5 230 68.7
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 2.3e-69 266.2 234 76.5
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 3.0e-69 265.8 232 69.4
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 3.0e-69 265.8 232 69.4
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 3.0e-69 265.8 230 69.1
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 4.0e-69 265.4 235 71.1
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 6.8e-69 264.6 232 68.5
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 6.8e-69 264.6 232 68.5
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 6.8e-69 264.6 231 67.5
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 1.2e-68 263.8 232 68.5
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 1.2e-68 263.8 229 85.6
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 1.5e-68 263.5 232 72.8
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 2.0e-68 263.1 231 72.7
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 2.0e-68 263.1 233 70.4
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 2.6e-68 262.7 236 74.6
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 5.7e-68 261.5 232 66.8
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 5.7e-68 261.5 223 70.0
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 7.5e-68 261.2 231 62.8
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 9.8e-68 260.8 232 72.8
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 4.9e-67 258.5 229 83.8
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 4.9e-67 258.5 223 65.9
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 8.3e-67 257.7 228 68.9
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 1.1e-66 257.3 231 65.8
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 3.2e-66 255.8 231 64.5
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 3.2e-66 255.8 230 65.2
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 4.1e-66 255.4 232 65.5
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 9.2e-66 254.2 232 65.1
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 1.2e-65 253.8 271 70.1
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 1.7e-64 250.0 233 67.0
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 3.0e-64 249.2 228 67.1
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 2.5e-63 246.1 232 70.3
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 2.5e-63 246.1 228 66.7
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.4e-61 240.4 229 76.0
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 2.3e-61 239.6 215 72.1
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 4.4e-60 235.3 251 54.6
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.7e-59 233.4 284 50.7
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 2.2e-59 233.0 227 64.3
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 1.1e-58 230.7 231 64.1
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 3.5e-57 225.7 231 58.9
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 1.7e-56 223.4 227 64.8
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 2.1e-54 216.5 223 59.6
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.4e-50 203.8 247 66.0
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.2e-50 202.6 108 97.2
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 4.1e-50 202.2 108 96.3
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 4.6e-49 198.7 108 95.4
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 1.3e-48 197.2 108 92.6
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 2.3e-48 196.4 187 68.4
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 2.1e-46 189.9 234 58.5
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 3.8e-43 179.1 113 82.3
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 7.1e-42 174.9 125 72.0
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 9.2e-42 174.5 223 54.3
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 1.6e-41 173.7 113 77.9
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.3e-40 170.6 113 77.0
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.7e-40 170.2 113 76.1
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 1.1e-37 161.0 230 51.3
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.2e-37 158.7 187 63.1
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 1.3e-35 154.1 238 48.7
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 2.7e-33 146.4 113 69.9
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.7e-32 143.7 204 61.8
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 8.7e-32 141.4 150 72.0
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 2.2e-27 126.7 67 89.6
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 2.2e-27 126.7 67 86.6
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 2.9e-27 126.3 67 86.6
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 4.9e-27 125.6 68 88.2
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.6e-25 120.6 67 83.6
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 6.7e-24 115.2 136 61.0
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 1.9e-23 113.6 221 38.9
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 8.1e-22 108.2 68 77.9
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 5.3e-21 105.5 66 78.8
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 4.5e-20 102.4 69 73.9
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 2.9e-19 99.8 60 80.0
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 1.1e-18 97.8 224 39.7
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 3.5e-17 92.8 174 46.6
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 6.7e-16 88.6 44 95.5
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 4.0e-13 79.3 53 73.6
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 3.8e-11 72.8 66 65.2
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 7.4e-07 58.5 55 50.9
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 2.8e-06 56.6 44 54.5


User provided reference genes

Program Settings