Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.5e-94 347.4 210 100.0
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 9.8e-86 320.5 223 90.6
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 6.4e-85 317.8 223 90.1
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.2e-84 315.5 223 89.7
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 5.4e-84 314.7 225 82.2
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.4e-84 314.7 223 89.2
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 6.2e-80 301.2 230 69.1
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 1.4e-79 300.1 229 81.2
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 1.4e-79 300.1 225 69.8
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 1.8e-79 299.7 210 74.3
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 6.8e-79 297.7 214 74.8
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 1.5e-78 296.6 230 68.3
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.0e-78 296.2 231 68.4
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.0e-78 296.2 231 68.4
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 2.0e-78 296.2 228 75.0
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 2.6e-78 295.8 222 84.2
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 2.6e-78 295.8 231 72.3
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 3.4e-78 295.4 215 71.2
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 4.4e-78 295.0 230 67.4
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 7.5e-78 294.3 221 71.0
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 1.7e-77 293.1 230 70.9
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 1.7e-77 293.1 224 69.6
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 1.7e-77 293.1 230 71.7
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 2.2e-77 292.7 229 67.2
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 2.9e-77 292.4 225 77.8
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 2.9e-77 292.4 228 69.3
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 2.9e-77 292.4 228 72.8
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 4.9e-77 291.6 226 77.4
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 4.9e-77 291.6 230 71.7
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 4.9e-77 291.6 229 75.1
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 4.9e-77 291.6 229 72.9
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 6.4e-77 291.2 230 75.2
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 6.4e-77 291.2 229 73.4
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 8.3e-77 290.8 225 81.3
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 8.3e-77 290.8 232 70.3
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 1.1e-76 290.4 228 68.4
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 1.9e-76 289.7 231 70.1
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 1.9e-76 289.7 226 68.1
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 2.4e-76 289.3 235 66.8
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 2.4e-76 289.3 215 72.1
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 2.4e-76 289.3 224 69.2
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 2.4e-76 289.3 231 70.1
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 2.4e-76 289.3 231 77.9
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 3.2e-76 288.9 231 72.3
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 4.1e-76 288.5 228 73.7
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 5.4e-76 288.1 227 69.2
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 5.4e-76 288.1 228 66.7
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 7.1e-76 287.7 229 72.1
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 7.1e-76 287.7 217 72.8
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 7.1e-76 287.7 231 67.1
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 9.2e-76 287.3 229 78.6
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 1.2e-75 287.0 230 69.1
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 1.6e-75 286.6 232 73.7
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 1.6e-75 286.6 233 70.4
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 2.1e-75 286.2 230 70.4
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 2.1e-75 286.2 230 67.4
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 2.1e-75 286.2 228 70.2
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 2.1e-75 286.2 233 78.1
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 2.1e-75 286.2 233 78.1
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 2.1e-75 286.2 231 71.0
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 2.7e-75 285.8 233 66.1
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 2.7e-75 285.8 246 62.6
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 2.7e-75 285.8 232 78.0
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 3.5e-75 285.4 231 65.4
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 4.6e-75 285.0 232 76.3
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 7.8e-75 284.3 230 70.9
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 1.3e-74 283.5 227 73.6
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 1.7e-74 283.1 232 66.4
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 1.7e-74 283.1 232 66.4
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 2.3e-74 282.7 231 64.9
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 2.3e-74 282.7 233 66.1
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 2.3e-74 282.7 233 66.1
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 2.3e-74 282.7 229 65.9
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 2.3e-74 282.7 232 66.4
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 3.0e-74 282.3 232 66.4
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 3.0e-74 282.3 230 67.0
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 3.0e-74 282.3 230 66.1
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 3.9e-74 282.0 232 67.7
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 3.9e-74 282.0 232 65.9
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 3.9e-74 282.0 230 66.1
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 3.9e-74 282.0 230 69.1
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 5.1e-74 281.6 231 64.9
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 5.1e-74 281.6 230 67.0
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 5.1e-74 281.6 233 67.8
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 5.1e-74 281.6 232 65.9
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 5.1e-74 281.6 229 66.4
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 6.6e-74 281.2 229 78.2
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 6.6e-74 281.2 227 76.7
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 8.6e-74 280.8 228 67.1
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 8.6e-74 280.8 233 67.0
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 8.6e-74 280.8 229 72.1
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 8.6e-74 280.8 231 67.1
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.5e-73 280.0 231 64.9
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 1.5e-73 280.0 232 66.8
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.5e-73 280.0 232 66.8
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 1.9e-73 279.6 232 65.5
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 1.9e-73 279.6 232 65.5
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 1.9e-73 279.6 230 66.5
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 2.5e-73 279.3 232 65.5
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 2.5e-73 279.3 232 65.5
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 2.5e-73 279.3 232 70.7
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 3.3e-73 278.9 243 64.2
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 3.3e-73 278.9 232 65.5
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 3.3e-73 278.9 231 64.9
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 3.3e-73 278.9 231 70.6
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 9.5e-73 277.3 235 67.2
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 9.5e-73 277.3 232 69.0
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 1.6e-72 276.6 232 64.7
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 2.1e-72 276.2 218 68.3
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 2.8e-72 275.8 215 71.2
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 8.1e-72 274.2 230 65.2
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 8.1e-72 274.2 224 69.6
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.0e-71 271.9 221 67.4
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 8.9e-71 270.8 231 64.5
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 1.5e-70 270.0 232 64.7
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 3.4e-70 268.9 232 64.2
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 4.4e-70 268.5 234 68.8
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 7.5e-70 267.7 232 66.4
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 7.5e-70 267.7 232 69.8
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 2.2e-69 266.2 236 67.4
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 4.9e-69 265.0 233 63.5
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 4.9e-69 265.0 231 63.2
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 4.9e-69 265.0 230 64.3
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 1.1e-68 263.8 271 67.2
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 5.4e-68 261.5 229 76.9
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 2.3e-66 256.1 229 75.1
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 1.5e-65 253.4 227 61.2
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.9e-65 253.1 229 72.9
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 4.3e-65 251.9 228 61.0
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.8e-63 246.5 284 52.5
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 1.8e-63 246.5 251 56.2
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 3.1e-63 245.7 227 60.8
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 6.8e-63 244.6 213 66.2
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 6.4e-61 238.0 229 61.6
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 3.5e-59 232.3 230 57.4
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 2.8e-56 222.6 223 56.5
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 4.8e-56 221.9 227 63.0
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.3e-53 213.8 247 62.3
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 1.1e-52 210.7 115 93.0
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.8e-51 204.5 108 98.1
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.0e-50 204.1 108 97.2
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.9e-50 202.2 108 97.2
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 5.1e-50 201.8 186 61.3
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.0e-46 189.9 210 59.5
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 5.8e-46 188.3 120 80.8
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 2.2e-45 186.4 234 51.3
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 1.9e-44 183.3 120 77.5
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 5.4e-44 181.8 132 70.5
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.2e-43 180.6 119 77.3
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 2.1e-43 179.9 120 75.8
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.1e-40 169.9 187 57.2
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 1.9e-36 156.8 230 44.8
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 9.3e-36 154.5 120 68.3
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 9.3e-36 154.5 191 67.0
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 2.1e-35 153.3 236 41.9
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 1.9e-33 146.7 150 62.0
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 9.3e-28 127.9 67 91.0
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 9.3e-28 127.9 67 88.1
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 1.2e-27 127.5 67 88.1
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 2.1e-27 126.7 68 89.7
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 6.1e-27 125.2 134 61.2
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 6.7e-26 121.7 67 85.1
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 4.8e-24 115.5 205 42.0
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 3.4e-22 109.4 68 79.4
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 2.2e-21 106.7 66 80.3
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 1.9e-20 103.6 69 75.4
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 4.2e-20 102.4 211 41.7
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 1.2e-19 100.9 60 81.7
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 2.8e-16 89.7 44 95.5
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 2.8e-16 89.7 174 38.5
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 1.5e-14 84.0 73 67.1
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 3.8e-13 79.3 53 73.6
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 3.1e-07 59.7 55 52.7
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.3e-07 58.9 82 45.1
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 1.2e-06 57.8 44 56.8
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.5e-06 55.8 88 40.9


User provided reference genes

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