Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0812 Salvia bowleyana HOM05D000183 ORTHO05D000100 4.1e-122 441.4 228 100.0
MSTRG.669 Avicennia marina HOM05D000183 ORTHO05D000100 2.7e-44 183.0 311 43.7
MSTRG.7830 Avicennia marina HOM05D000183 ORTHO05D000100 2.7e-41 172.9 322 41.3
Oeu033311.1 Olea europaea HOM05D000183 ORTHO05D000100 6.1e-41 171.8 307 41.0
MSTRG.2361 Avicennia marina HOM05D000183 ORTHO05D000100 2.5e-34 149.8 312 39.7
Oeu011699.2 Olea europaea HOM05D000183 ORTHO05D000100 5.5e-34 148.7 302 39.7
Migut.E00117 Erythranthe guttata HOM05D000183 ORTHO05D000100 2.6e-31 139.8 252 38.9
SGA_v2.0_scaffold163G38059 Striga asiatica HOM05D000183 ORTHO05D000100 1.1e-29 134.4 312 39.7
Migut.L01347 Erythranthe guttata HOM05D000183 ORTHO05D000100 2.5e-26 123.2 306 37.3
SGA_v2.0_scaffold87G26970 Striga asiatica HOM05D000183 ORTHO05D000100 3.6e-25 119.4 265 39.2
unitig_747.g21166 Utricularia gibba HOM05D000183 ORTHO05D000100 6.1e-25 118.6 158 44.9
Peaxi162Scf00209g00515 Petunia axillaris HOM05D000183 ORTHO05D000100 1.0e-24 117.9 303 36.0
TAR622G0376 Trochodendron aralioides HOM05D000183 ORTHO05D000100 1.2e-23 114.4 324 34.3
unitig_699.g19922 Utricularia gibba HOM05D000183 ORTHO05D000100 2.0e-23 113.6 159 45.3
Dinv34196 Davidia involucrata HOM05D000183 ORTHO05D000100 9.8e-23 111.3 288 32.6
CSS0007621 Camellia sinensis var. sinensis HOM05D000183 ORTHO05D000100 1.7e-22 110.5 323 33.1
Cc11_g13540 Coffea canephora HOM05D000183 ORTHO05D000100 2.2e-22 110.2 322 34.8
MD13G1030700 Malus domestica HOM05D000183 ORTHO05D000100 2.2e-22 110.2 327 32.7
GSVIVG01020078001 Vitis vinifera HOM05D000183 ORTHO05D000100 2.2e-22 110.2 324 31.2
SalBow8G2640 Salvia bowleyana HOM05D000183 ORTHO05D000100 3.7e-22 109.4 240 38.3
QL10p015527 Quercus lobata HOM05D000183 ORTHO05D000100 1.9e-21 107.1 331 32.9
Hma1.2p1_0002F.1_g003260 Hydrangea macrophylla HOM05D000183 ORTHO05D000100 2.4e-21 106.7 319 33.2
Dinv19914 Davidia involucrata HOM05D000183 ORTHO05D000100 7.0e-21 105.1 321 31.8
unitig_8.g3204 Utricularia gibba HOM05D000183 ORTHO05D000100 7.0e-21 105.1 224 36.6
FvH4_5g15520 Fragaria vesca HOM05D000183 ORTHO05D000100 9.2e-21 104.8 197 39.1
Ciclev10024310m.g Citrus clementina HOM05D000183 ORTHO05D000100 1.2e-20 104.4 313 31.3
FAN13G1128 Fragaria x ananassa HOM05D000183 ORTHO05D000100 2.0e-20 103.6 197 39.1
FAN18G0497 Fragaria x ananassa HOM05D000183 ORTHO05D000100 2.7e-20 103.2 197 38.6
CsaV3_1G007930 Cucumis sativus L. HOM05D000183 ORTHO05D000100 3.5e-20 102.8 192 38.0
CSS0035489 Camellia sinensis var. sinensis HOM05D000183 ORTHO05D000100 4.6e-20 102.4 187 39.6
Cfa009041 Carpinus fangiana HOM05D000183 ORTHO05D000100 6.0e-20 102.1 326 31.6
Lj2g0000398 Lotus japonicus HOM05D000183 ORTHO05D000100 6.0e-20 102.1 326 32.5
Sopen04g001860 Solanum pennellii HOM05D000183 ORTHO05D000100 6.0e-20 102.1 188 43.6
ClCG01G014380 Citrullus lanatus HOM05D000183 ORTHO05D000100 1.0e-19 101.3 196 37.2
FAN04G1999 Fragaria x ananassa HOM05D000183 ORTHO05D000100 1.3e-19 100.9 197 38.1
VMungo1215G1175 Vigna mungo HOM05D000183 ORTHO05D000100 2.3e-19 100.1 331 32.6
FAN08G1129 Fragaria x ananassa HOM05D000183 ORTHO05D000100 3.9e-19 99.4 197 37.6
CANSAT64G1431 Cannabis sativa HOM05D000183 ORTHO05D000100 5.0e-19 99.0 323 32.5
MELO3C002209.2 Cucumis melo HOM05D000183 ORTHO05D000100 5.0e-19 99.0 192 37.5
DCAR_007131 Daucus carota HOM05D000183 ORTHO05D000100 8.6e-19 98.2 310 32.6
Phvul.002G067200 Phaseolus vulgaris HOM05D000183 ORTHO05D000100 8.6e-19 98.2 333 32.1
GSVIVG01008065001 Vitis vinifera HOM05D000183 ORTHO05D000100 8.6e-19 98.2 257 33.9
Dinv38664 Davidia involucrata HOM05D000183 ORTHO05D000100 1.1e-18 97.8 327 31.8
Solyc04g005800.3 Solanum lycopersicum HOM05D000183 ORTHO05D000100 1.9e-18 97.1 316 33.2
Haze_07381 Corylus avellana HOM05D000183 ORTHO05D000100 2.5e-18 96.7 300 31.7
Hma1.2p1_1045F.1_g251470 Hydrangea macrophylla HOM05D000183 ORTHO05D000100 3.3e-18 96.3 325 30.8
Nitab4.5_0000710g0010 Nicotiana tabacum HOM05D000183 ORTHO05D000100 4.3e-18 95.9 321 33.0
Nitab4.5_0000679g0080 Nicotiana tabacum HOM05D000183 ORTHO05D000100 9.5e-18 94.7 293 33.1
CAN.G27.6 Capsicum annuum HOM05D000183 ORTHO05D000100 8.1e-17 91.7 309 32.4
Potri.012G070900 Populus trichocarpa HOM05D000183 ORTHO05D000100 8.1e-17 91.7 327 29.4
TAR481G0003 Trochodendron aralioides HOM05D000183 ORTHO05D000100 8.1e-17 91.7 320 32.5
Sed0017624 Sechium edule HOM05D000183 ORTHO05D000100 1.8e-16 90.5 192 33.9
CiPaw.11G037900 Carya illinoinensis HOM05D000183 ORTHO05D000100 3.1e-16 89.7 331 29.3
MD06G1187600 Malus domestica HOM05D000183 ORTHO05D000100 4.0e-16 89.4 327 30.0
QL03p065914 Quercus lobata HOM05D000183 ORTHO05D000100 4.0e-16 89.4 324 29.9
Ca_04733_v3 Cicer arietinum L. HOM05D000183 ORTHO05D000100 6.8e-16 88.6 336 31.2
Ca_30518_v3 Cicer arietinum L. HOM05D000183 ORTHO05D000100 6.8e-16 88.6 336 31.2
Phvul.003G192900 Phaseolus vulgaris HOM05D000183 ORTHO05D000100 6.8e-16 88.6 310 28.1
Haze_12071 Corylus avellana HOM05D000183 ORTHO05D000100 8.9e-16 88.2 329 31.0
PGSC0003DMG400002835 Solanum tuberosum HOM05D000183 ORTHO05D000100 1.2e-15 87.8 316 32.9
TWI18G0233 Tripterygium wilfordii HOM05D000183 ORTHO05D000100 1.2e-15 87.8 294 32.3
Thecc.02G233000 Theobroma cacao HOM05D000183 ORTHO05D000100 2.6e-15 86.7 296 30.7
Eucgr.B03409 Eucalyptus grandis HOM05D000183 ORTHO05D000100 3.4e-15 86.3 295 28.1
Gohir.D07G069800 Gossypium hirsutum HOM05D000183 ORTHO05D000100 3.4e-15 86.3 150 38.0
Eucgr.K02448 Eucalyptus grandis HOM05D000183 ORTHO05D000100 4.4e-15 85.9 190 38.9
Glyma.02G022300 Glycine max HOM05D000183 ORTHO05D000100 4.4e-15 85.9 351 30.2
Nitab4.5_0002804g0010 Nicotiana tabacum HOM05D000183 ORTHO05D000100 4.4e-15 85.9 188 38.3
Sed0026760 Sechium edule HOM05D000183 ORTHO05D000100 5.8e-15 85.5 317 30.0
MBI05_g28285_MAGBIO Magnolia biondii HOM05D000183 ORTHO05D000100 7.5e-15 85.1 199 35.7
Oeu001594.1 Olea europaea HOM05D000183 ORTHO05D000100 7.5e-15 85.1 280 31.1
Potri.015G065400 Populus trichocarpa HOM05D000183 ORTHO05D000100 7.5e-15 85.1 326 29.1
Actinidia37659 Actinidia chinensis HOM05D000183 ORTHO05D000100 9.8e-15 84.7 306 30.7
Prupe.5G185900 Prunus persica HOM05D000183 ORTHO05D000100 2.2e-14 83.6 197 34.5
RcHm_v2.0_Chr7g0180571 Rosa chinensis HOM05D000183 ORTHO05D000100 2.2e-14 83.6 197 34.5
VMungo1215G1672 Vigna mungo HOM05D000183 ORTHO05D000100 4.9e-14 82.4 306 29.1
Cc04_g15600 Coffea canephora HOM05D000183 ORTHO05D000100 6.4e-14 82.0 325 31.1
Eucgr.B00423 Eucalyptus grandis HOM05D000183 ORTHO05D000100 6.4e-14 82.0 194 34.0
Lalb_Chr10g0097951 Lupinus albus HOM05D000183 ORTHO05D000100 6.4e-14 82.0 328 26.5
MD13G1079500 Malus domestica HOM05D000183 ORTHO05D000100 8.3e-14 81.6 265 31.7
PGSC0003DMG400017640 Solanum tuberosum HOM05D000183 ORTHO05D000100 1.1e-13 81.3 315 31.1
Glyma.01G041700 Glycine max HOM05D000183 ORTHO05D000100 1.4e-13 80.9 221 33.0
Lalb_Chr13g0303421 Lupinus albus HOM05D000183 ORTHO05D000100 1.4e-13 80.9 196 32.7
Sc12g0006190 Simmondsia chinensis HOM05D000183 ORTHO05D000100 2.4e-13 80.1 195 32.8
Actinidia04920 Actinidia chinensis HOM05D000183 ORTHO05D000100 3.2e-13 79.7 306 30.4
Duzib205G0225 Durio zibethinus HOM05D000183 ORTHO05D000100 3.2e-13 79.7 314 31.2
PGR044G2659 Punica granatum HOM05D000183 ORTHO05D000100 3.2e-13 79.7 194 35.6
Rhsim08G0160100 Rhododendron simsii HOM05D000183 ORTHO05D000100 3.2e-13 79.7 187 35.3
COL.COLO4_36180 Corchorus olitorius HOM05D000183 ORTHO05D000100 4.1e-13 79.3 314 30.9
Glyma.05G030000 Glycine max HOM05D000183 ORTHO05D000100 4.1e-13 79.3 329 28.9
Duzib068G0161 Durio zibethinus HOM05D000183 ORTHO05D000100 5.4e-13 79.0 336 29.5
Glyma.08G295800 Glycine max HOM05D000183 ORTHO05D000100 5.4e-13 79.0 323 27.9
Lalb_Chr17g0340291 Lupinus albus HOM05D000183 ORTHO05D000100 9.2e-13 78.2 337 28.5
Medtr5g038280 Medicago truncatula HOM05D000183 ORTHO05D000100 1.2e-12 77.8 335 29.3
Gohir.A07G065100 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.6e-12 77.4 150 35.3
MD14G1194000 Malus domestica HOM05D000183 ORTHO05D000100 1.6e-12 77.4 100 48.0
MD16G1079400 Malus domestica HOM05D000183 ORTHO05D000100 2.1e-12 77.0 329 31.0
Manes.01G191500 Manihot esculenta HOM05D000183 ORTHO05D000100 2.1e-12 77.0 269 29.7
Prupe.1G267300 Prunus persica HOM05D000183 ORTHO05D000100 2.1e-12 77.0 98 55.1
Solyc05g006980.3 Solanum lycopersicum HOM05D000183 ORTHO05D000100 3.5e-12 76.3 285 30.2
RcHm_v2.0_Chr4g0440751 Rosa chinensis HOM05D000183 ORTHO05D000100 4.6e-12 75.9 311 31.2
Hund09369 Selenicereus undatus HOM05D000183 ORTHO05D000100 4.6e-12 75.9 299 28.1
Manes.05G096100 Manihot esculenta HOM05D000183 ORTHO05D000100 6.0e-12 75.5 231 34.2
CSS0038937 Camellia sinensis var. sinensis HOM05D000183 ORTHO05D000100 7.8e-12 75.1 290 28.3
DCAR_031059 Daucus carota HOM05D000183 ORTHO05D000100 7.8e-12 75.1 194 33.5
Sopen05g002940 Solanum pennellii HOM05D000183 ORTHO05D000100 7.8e-12 75.1 189 34.4
Cfa018992 Carpinus fangiana HOM05D000183 ORTHO05D000100 1.0e-11 74.7 282 30.9
Gohir.A12G175190 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.3e-11 74.3 309 31.4
PGR083G0791 Punica granatum HOM05D000183 ORTHO05D000100 1.7e-11 73.9 194 33.0
Thecc.03G078700 Theobroma cacao HOM05D000183 ORTHO05D000100 1.7e-11 73.9 337 30.3
Gorai.001G073600 Gossypium raimondii HOM05D000183 ORTHO05D000100 2.3e-11 73.6 175 33.1
Cpa.g.sc17.200 Carica papaya HOM05D000183 ORTHO05D000100 3.9e-11 72.8 187 33.2
CiPaw.05G140200 Carya illinoinensis HOM05D000183 ORTHO05D000100 3.9e-11 72.8 323 27.9
arahy.Tifrunner.gnm1.ann1.1E6H8M Arachis hypogaea HOM05D000183 ORTHO05D000100 5.1e-11 72.4 251 31.5
arahy.Tifrunner.gnm1.ann1.240NKR Arachis hypogaea HOM05D000183 ORTHO05D000100 6.6e-11 72.0 251 31.5
Psat2g125240 Pisum sativum HOM05D000183 ORTHO05D000100 8.6e-11 71.6 199 34.7
ATR1120G117 Amborella trichopoda HOM05D000183 ORTHO05D000100 1.1e-10 71.2 310 27.7
COL.COLO4_37394 Corchorus olitorius HOM05D000183 ORTHO05D000100 1.5e-10 70.9 184 34.8
Gohir.D12G178100 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.5e-10 70.9 311 29.3
DCAR_016533 Daucus carota HOM05D000183 ORTHO05D000100 2.5e-10 70.1 197 32.0
FvH4_4g32060 Fragaria vesca HOM05D000183 ORTHO05D000100 3.3e-10 69.7 330 30.9
Sc11g0001670 Simmondsia chinensis HOM05D000183 ORTHO05D000100 4.3e-10 69.3 202 32.2
Aqoxy3G03259 Aquilegia oxysepala HOM05D000183 ORTHO05D000100 5.6e-10 68.9 313 28.8
FAN12G0582 Fragaria x ananassa HOM05D000183 ORTHO05D000100 5.6e-10 68.9 330 30.6
Gorai.008G190300 Gossypium raimondii HOM05D000183 ORTHO05D000100 5.6e-10 68.9 308 29.2
Glyma.06G190200 Glycine max HOM05D000183 ORTHO05D000100 7.3e-10 68.6 197 33.5
Sabra15G0090600 Salix brachista HOM05D000183 ORTHO05D000100 9.5e-10 68.2 310 26.5
Actinidia04026 Actinidia chinensis HOM05D000183 ORTHO05D000100 1.2e-09 67.8 316 25.9
Glyma.18G126800 Glycine max HOM05D000183 ORTHO05D000100 1.2e-09 67.8 327 27.5
Oeu024864.1 Olea europaea HOM05D000183 ORTHO05D000100 2.1e-09 67.0 183 29.0
arahy.Tifrunner.gnm1.ann1.0V6YW0 Arachis hypogaea HOM05D000183 ORTHO05D000100 2.8e-09 66.6 173 31.2
TWI81G0845 Tripterygium wilfordii HOM05D000183 ORTHO05D000100 2.8e-09 66.6 202 32.2
Glyma.17G096700 Glycine max HOM05D000183 ORTHO05D000100 3.6e-09 66.2 246 31.7
Phvul.003G070300 Phaseolus vulgaris HOM05D000183 ORTHO05D000100 4.7e-09 65.9 319 27.0
Lj4g0018002 Lotus japonicus HOM05D000183 ORTHO05D000100 6.2e-09 65.5 260 29.2
Peaxi162Scf00574g00056 Petunia axillaris HOM05D000183 ORTHO05D000100 6.2e-09 65.5 330 28.2
unitig_22.g6529 Utricularia gibba HOM05D000183 ORTHO05D000100 6.2e-09 65.5 128 38.3
VMungo0251G2320 Vigna mungo HOM05D000183 ORTHO05D000100 6.2e-09 65.5 319 28.8
Sabra12G0050400 Salix brachista HOM05D000183 ORTHO05D000100 8.1e-09 65.1 194 31.4
VMungo1309G2311 Vigna mungo HOM05D000183 ORTHO05D000100 1.8e-08 63.9 190 31.6
TPR.G13776 Trifolium pratense HOM05D000183 ORTHO05D000100 2.3e-08 63.5 101 47.5
THA.LOC104822385 Tarenaya hassleriana HOM05D000183 ORTHO05D000100 4.0e-08 62.8 101 40.6
ECA232G3127 Erigeron canadensis HOM05D000183 ORTHO05D000100 5.2e-08 62.4 309 27.5
arahy.Tifrunner.gnm1.ann1.QLUK9J Arachis hypogaea HOM05D000183 ORTHO05D000100 6.8e-08 62.0 173 30.6
Duzib251G0080 Durio zibethinus HOM05D000183 ORTHO05D000100 6.8e-08 62.0 304 27.3
FAN07G0312 Fragaria x ananassa HOM05D000183 ORTHO05D000100 6.8e-08 62.0 331 28.7
FAN17G1710 Fragaria x ananassa HOM05D000183 ORTHO05D000100 1.2e-07 61.2 331 29.6
Manes.06G096600 Manihot esculenta HOM05D000183 ORTHO05D000100 1.5e-07 60.8 195 30.8
Actinidia31176 Actinidia chinensis HOM05D000183 ORTHO05D000100 2.0e-07 60.5 138 31.9
Lsat_1_v5_gn_8_53901 Lactuca sativa HOM05D000183 ORTHO05D000100 2.0e-07 60.5 290 25.5
Phvul.009G190200 Phaseolus vulgaris HOM05D000183 ORTHO05D000100 2.0e-07 60.5 199 29.6
FAN22G0218 Fragaria x ananassa HOM05D000183 ORTHO05D000100 2.6e-07 60.1 332 28.9
HanXRQChr09g0271141 Helianthus annuus HOM05D000183 ORTHO05D000100 2.6e-07 60.1 290 27.6
Nitab4.5_0002969g0060 Nicotiana tabacum HOM05D000183 ORTHO05D000100 3.4e-07 59.7 194 28.4
Hund05916 Selenicereus undatus HOM05D000183 ORTHO05D000100 3.4e-07 59.7 327 28.4
TWI60G1343 Tripterygium wilfordii HOM05D000183 ORTHO05D000100 3.4e-07 59.7 198 29.8
Manes.17G122400 Manihot esculenta HOM05D000183 ORTHO05D000100 5.8e-07 58.9 114 37.7
SEGI_19578 Sequoiadendron giganteum HOM05D000183 ORTHO05D000100 7.6e-07 58.5 206 27.2
Gohir.A03G146100 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.3e-06 57.8 180 33.3
Carub.0001s2393 Capsella rubella HOM05D000183 ORTHO05D000100 1.7e-06 57.4 56 51.8
Cpa.g.sc1379.1 Carica papaya HOM05D000183 ORTHO05D000100 1.7e-06 57.4 191 32.5
Rhsim12G0159500 Rhododendron simsii HOM05D000183 ORTHO05D000100 1.7e-06 57.4 173 27.7
TPR.G38387 Trifolium pratense HOM05D000183 ORTHO05D000100 2.2e-06 57.0 194 30.9
BNapus_Darmor_BZH_scaffold_119p00020 Brassica napus HOM05D000183 ORTHO05D000100 4.9e-06 55.8 101 37.6
BNapus_Darmor_BZH_scaffold_133p00010 Brassica napus HOM05D000869 ORTHO05D000685 4.9e-06 55.8 101 37.6
BNapus_Darmor_BZH_scaffold_97p00410 Brassica napus HOM05D000183 ORTHO05D000100 4.9e-06 55.8 101 37.6
BraA01t04667Z Brassica rapa HOM05D000183 ORTHO05D000100 4.9e-06 55.8 101 37.6
CiPaw.06G080400 Carya illinoinensis HOM05D000183 ORTHO05D000100 4.9e-06 55.8 192 30.7
AT1G27045 Arabidopsis thaliana HOM05D000183 ORTHO05D000100 6.4e-06 55.5 140 32.9
Thhalv10008672m.g Eutrema salsugineum HOM05D000183 ORTHO05D000100 6.4e-06 55.5 183 31.1
PGSC0003DMG400025342 Solanum tuberosum HOM05D000183 ORTHO05D000100 6.4e-06 55.5 298 27.5
CAN.G999.45 Capsicum annuum HOM05D000183 ORTHO05D000100 8.4e-06 55.1 319 27.3
Nitab4.5_0003577g0040 Nicotiana tabacum HOM05D000183 ORTHO05D000100 8.4e-06 55.1 149 32.2
HPP92_018222 Vanilla planifolia HOM05D000183 ORTHO05D000100 8.4e-06 55.1 99 39.4


User provided reference genes

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