Gene: AT1G27045

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G27045
  • Transcript Identifier AT1G27045.1
  • Gene Type Coding gene
  • Location Chr1 : 9391893-9392887 : positive

Gene Family Information

  • ID HOM05D000183
  • #Genes/#Species 2094/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G27045.1
  • symbol ATHB54
  • Alias HB54,homeobox protein 54
  • full_name homeobox protein 54
  • uniprot P0CJ65

Descriptions

  • Description Homeobox-leucine zipper protein family
  • Computational description Homeobox-leucine zipper protein family; FUNCTIONS IN: sequence-specific DNA binding, transcription regulator activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 1 (TAIR:AT3G01470.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IBA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000981
IEA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0043565
IBA
IEA
Gene Ontologysequence-specific DNA binding1
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000047 Helix-turn-helix motif
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR003106 Leucine zipper, homeobox-associated
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)