Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0030700 Salix brachista HOM05D001473 ORTHO05D019080 4.6e-161 571.2 302 100.0
Sabra19G0028000 Salix brachista HOM05D001473 ORTHO05D003934 4.1e-117 425.2 374 69.3
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 5.5e-106 388.3 374 65.5
Potri.019G018400 Populus trichocarpa HOM05D001473 ORTHO05D003934 6.1e-105 384.8 374 63.6
Sabra19G0030800 Salix brachista HOM05D001473 ORTHO05D019080 6.5e-91 338.2 222 86.0
Sabra19G0031000 Salix brachista HOM05D001473 ORTHO05D019080 8.6e-83 311.2 236 75.8
Potri.013G046300 Populus trichocarpa HOM05D001473 ORTHO05D003934 6.8e-80 301.6 424 49.1
Sabra19G0030900 Salix brachista HOM05D001473 ORTHO05D019080 4.9e-62 242.3 168 81.5
Sabra19G0030600 Salix brachista HOM05D001473 ORTHO05D019080 5.4e-61 238.8 168 81.0
Manes.08G139000 Manihot esculenta HOM05D001473 ORTHO05D003934 8.4e-38 161.8 336 39.6
Sabra19G0030500 Salix brachista HOM05D001473 ORTHO05D019080 1.1e-37 161.4 160 63.1
Manes.09G148400 Manihot esculenta HOM05D001473 ORTHO05D003934 5.1e-35 152.5 319 40.1
Atru.chr2.968 Acer truncatum HOM05D001473 ORTHO05D003934 2.5e-26 123.6 330 33.3
Dinv18449 Davidia involucrata HOM05D001473 ORTHO05D003934 2.1e-25 120.6 338 34.0
Dinv05754 Davidia involucrata HOM05D001473 ORTHO05D003934 1.4e-24 117.9 367 34.1
CSS0044349 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.8e-24 117.5 357 33.1
QL03p030821 Quercus lobata HOM05D001473 ORTHO05D003934 1.8e-24 117.5 340 32.6
CSS0012083 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 2.4e-24 117.1 357 32.8
TWI79G0745 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 4.0e-24 116.3 348 32.8
Gohir.A13G167900 Gossypium hirsutum HOM05D001473 ORTHO05D003934 2.0e-23 114.0 330 33.0
Prupe.6G349400 Prunus persica HOM05D001473 ORTHO05D003934 2.6e-23 113.6 339 32.7
Cpa.g.sc306.2 Carica papaya HOM05D001473 ORTHO05D003934 7.6e-23 112.1 311 33.8
Duzib128G0032 Durio zibethinus HOM05D001473 ORTHO05D003934 7.6e-23 112.1 332 31.6
TAR362G0879 Trochodendron aralioides HOM05D001473 ORTHO05D003934 1.0e-22 111.7 353 32.6
Ciclev10018691m.g Citrus clementina HOM05D001473 ORTHO05D003934 1.7e-22 110.9 354 32.5
Gorai.013G187200 Gossypium raimondii HOM05D001473 ORTHO05D003934 2.9e-22 110.2 330 32.7
CiPaw.04G081100 Carya illinoinensis HOM05D001473 ORTHO05D003934 8.4e-22 108.6 235 37.4
TWI31G0266 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 1.1e-21 108.2 344 32.8
Gohir.D13G173300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.4e-21 107.8 330 32.4
Actinidia40002 Actinidia chinensis HOM05D001473 ORTHO05D003934 2.5e-21 107.1 350 33.7
CANSAT54G0715 Cannabis sativa HOM05D001473 ORTHO05D003934 5.5e-21 105.9 334 33.5
GSVIVG01023526001 Vitis vinifera HOM05D001473 ORTHO05D003934 5.5e-21 105.9 184 41.8
Thecc.05G271600 Theobroma cacao HOM05D001473 ORTHO05D003934 9.3e-21 105.1 339 32.4
Duzib106G1036 Durio zibethinus HOM05D001473 ORTHO05D003934 1.6e-20 104.4 333 33.3
PGR031G3359 Punica granatum HOM05D001473 ORTHO05D003934 1.6e-20 104.4 184 39.1
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 2.1e-20 104.0 348 32.2
MD12G1246400 Malus domestica HOM05D001473 ORTHO05D003934 3.5e-20 103.2 339 33.6
Gohir.D11G258300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 7.9e-20 102.1 333 31.8
Gorai.007G276500 Gossypium raimondii HOM05D001473 ORTHO05D003934 7.9e-20 102.1 333 31.8
Lj1g0012496 Lotus japonicus HOM05D001473 ORTHO05D003934 1.3e-19 101.3 338 30.8
CSS0002418 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.8e-19 100.9 200 41.5
Gohir.A11G247900 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.8e-19 100.9 332 31.0
Haze_25281 Corylus avellana HOM05D001473 ORTHO05D003934 2.3e-19 100.5 390 30.3
PGSC0003DMG400011500 Solanum tuberosum HOM05D001473 ORTHO05D003934 3.0e-19 100.1 201 39.8
Solyc04g009950.3 Solanum lycopersicum HOM05D001473 ORTHO05D003934 5.1e-19 99.4 206 37.4
AUR62000484 Chenopodium quinoa HOM05D001473 ORTHO05D003934 6.7e-19 99.0 324 30.9
CsaV3_UNG002030 Cucumis sativus L. HOM05D001473 ORTHO05D003934 6.7e-19 99.0 219 37.0
AUR62006826 Chenopodium quinoa HOM05D001473 ORTHO05D003934 8.7e-19 98.6 325 31.1
CSS0020922 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.5e-18 97.8 200 41.0
Lj5A229T67 Lonicera japonica HOM05D001473 ORTHO05D003934 1.5e-18 97.8 184 40.2
Hund07267 Selenicereus undatus HOM05D001473 ORTHO05D003934 1.9e-18 97.4 297 32.0
vmacro19999 Vaccinium macrocarpon HOM05D001473 ORTHO05D003934 1.9e-18 97.4 300 33.0
Cfa002922 Carpinus fangiana HOM05D001473 ORTHO05D003934 2.5e-18 97.1 381 30.2
CAN.G1609.5 Capsicum annuum HOM05D001473 ORTHO05D003934 5.7e-18 95.9 181 39.8
VMungo0464G0145 Vigna mungo HOM05D001473 ORTHO05D003934 7.4e-18 95.5 291 30.2
COL.COLO4_15470 Corchorus olitorius HOM05D001473 ORTHO05D003934 9.6e-18 95.1 255 33.7
Duzib177G0283 Durio zibethinus HOM05D001473 ORTHO05D003934 9.6e-18 95.1 254 34.3
SHI00615 Sapria himalayana HOM05D001473 ORTHO05D003934 9.6e-18 95.1 76 65.8
Sed0003092 Sechium edule HOM05D001473 ORTHO05D003934 9.6e-18 95.1 287 32.8
Peaxi162Scf00135g00313 Petunia axillaris HOM05D001473 ORTHO05D003934 1.3e-17 94.7 234 35.9
Rhsim05G0175000 Rhododendron simsii HOM05D001473 ORTHO05D003934 1.3e-17 94.7 246 35.8
AUR62023607 Chenopodium quinoa HOM05D001473 ORTHO05D003934 2.1e-17 94.0 292 32.5
EL10Ac4g09571 Beta vulgaris HOM05D001473 ORTHO05D003934 2.8e-17 93.6 352 29.0
Glyma.10G165900 Glycine max HOM05D001473 ORTHO05D003934 2.8e-17 93.6 201 37.8
CSS0046947 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 3.7e-17 93.2 192 38.0
ClCG06G009590 Citrullus lanatus HOM05D001473 ORTHO05D003934 3.7e-17 93.2 271 32.5
CsaV3_1G045330 Cucumis sativus L. HOM05D001473 ORTHO05D003934 4.8e-17 92.8 77 63.6
Sopen04g005080 Solanum pennellii HOM05D001473 ORTHO05D003934 6.3e-17 92.4 148 44.6
MELO3C017522.2 Cucumis melo HOM05D001473 ORTHO05D003934 8.2e-17 92.0 357 29.7
arahy.Tifrunner.gnm1.ann1.0270XD Arachis hypogaea HOM05D001473 ORTHO05D003934 1.8e-16 90.9 73 65.8
CSS0041231 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.8e-16 90.9 206 37.9
DCAR_023095 Daucus carota HOM05D001473 ORTHO05D003934 1.8e-16 90.9 181 38.7
TPR.G6939 Trifolium pratense HOM05D001473 ORTHO05D003934 1.8e-16 90.9 181 38.1
Eucgr.B01570 Eucalyptus grandis HOM05D001473 ORTHO05D003934 3.1e-16 90.1 203 36.9
Phvul.L001860 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 3.1e-16 90.1 148 43.2
Medtr7g115550 Medicago truncatula HOM05D001473 ORTHO05D003934 4.1e-16 89.7 74 62.2
Psat3g006920 Pisum sativum HOM05D001473 ORTHO05D003934 4.1e-16 89.7 181 38.7
Glyma.20G223300 Glycine max HOM05D001473 ORTHO05D003934 5.3e-16 89.4 215 34.9
Lalb_Chr15g0076051 Lupinus albus HOM05D001473 ORTHO05D003934 9.0e-16 88.6 314 29.3
Oeu012234.1 Olea europaea HOM05D001473 ORTHO05D003934 9.0e-16 88.6 339 31.0
Ca_09455_v3 Cicer arietinum L. HOM05D001473 ORTHO05D003934 1.5e-15 87.8 181 38.1
Sc08g0009190 Simmondsia chinensis HOM05D001473 ORTHO05D003934 1.5e-15 87.8 148 42.6
Lsat_1_v5_gn_8_2880 Lactuca sativa HOM05D001473 ORTHO05D003934 2.6e-15 87.0 218 33.0
Aqoxy2G03659 Aquilegia oxysepala HOM05D001473 ORTHO05D003934 4.5e-15 86.3 76 59.2
arahy.Tifrunner.gnm1.ann1.HJHY8E Arachis hypogaea HOM05D001473 ORTHO05D003934 1.7e-14 84.3 266 30.1
arahy.Tifrunner.gnm1.ann1.R6YD0H Arachis hypogaea HOM05D001473 ORTHO05D003934 1.7e-14 84.3 266 30.1
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.7e-14 84.3 76 56.6
ATR0736G172 Amborella trichopoda HOM05D001473 ORTHO05D003934 2.2e-14 84.0 148 39.9
arahy.Tifrunner.gnm1.ann1.33TMW6 Arachis hypogaea HOM05D001473 ORTHO05D003934 2.2e-14 84.0 262 31.7
FvH4_6g01950 Fragaria vesca HOM05D001473 ORTHO05D003934 2.2e-14 84.0 148 40.5
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.2e-14 84.0 148 40.5
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.2e-14 84.0 76 56.6
FAN14G3813 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.2e-14 84.0 76 56.6
Phvul.004G090900 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 2.2e-14 84.0 293 29.7
RcHm_v2.0_Chr3g0449801 Rosa chinensis HOM05D001473 ORTHO05D003934 2.2e-14 84.0 332 28.9
MD04G1229500 Malus domestica HOM05D001473 ORTHO05D003934 6.5e-14 82.4 312 30.4
Sc03g0006100 Simmondsia chinensis HOM05D001473 ORTHO05D003934 6.5e-14 82.4 76 55.3
Lalb_Chr18g0044021 Lupinus albus HOM05D001473 ORTHO05D003934 8.4e-14 82.0 137 40.9
Peaxi162Scf00304g00075 Petunia axillaris HOM05D001473 ORTHO05D003934 8.4e-14 82.0 71 60.6
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.1e-13 81.6 148 39.9
Aa31LG1G5220 Aethionema arabicum HOM05D001473 ORTHO05D003934 3.2e-13 80.1 181 36.5
Thhalv10006800m.g Eutrema salsugineum HOM05D001473 ORTHO05D003934 4.2e-13 79.7 148 40.5
Migut.F01544 Erythranthe guttata HOM05D001473 ORTHO05D003934 7.2e-13 79.0 71 56.3
PSO063G2917 Papaver somniferum HOM05D001473 ORTHO05D003934 7.2e-13 79.0 76 53.9
ECA233G2045 Erigeron canadensis HOM05D001473 ORTHO05D003934 2.1e-12 77.4 289 30.8
unitig_0.g2788 Utricularia gibba HOM05D001473 ORTHO05D003934 2.7e-12 77.0 148 37.8
Lj5g0018401 Lotus japonicus HOM05D001473 ORTHO05D003934 3.5e-12 76.6 295 29.5
Sp1g08360 Schrenkiella parvula HOM05D001473 ORTHO05D003934 3.5e-12 76.6 148 39.9
CDE04G2649 Ceratophyllum demersum HOM05D001473 ORTHO05D003934 4.6e-12 76.3 76 48.7
CDE07G0773 Ceratophyllum demersum HOM05D001473 ORTHO05D003934 4.6e-12 76.3 76 48.7
Zm00001eb142770 Zea mays HOM05D001473 ORTHO05D003934 4.6e-12 76.3 151 36.4
Cc02_g08900 Coffea canephora HOM05D001473 ORTHO05D003934 1.0e-11 75.1 178 34.3
THA.LOC104805779 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 1.3e-11 74.7 148 36.5
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.8e-11 74.3 312 27.9
HPP92_023254 Vanilla planifolia HOM05D001473 ORTHO05D003934 2.3e-11 73.9 284 26.8
CARHR009740 Cardamine hirsuta HOM05D001473 ORTHO05D003934 3.0e-11 73.6 197 32.5
HPP92_023312 Vanilla planifolia HOM05D001473 ORTHO05D003934 5.1e-11 72.8 284 26.8
SGA_v2.0_scaffold1G00525 Striga asiatica HOM05D001473 ORTHO05D003934 8.7e-11 72.0 148 35.8
Os04g0348300 Oryza sativa ssp. japonica HOM05D001473 ORTHO05D003934 1.1e-10 71.6 330 26.7
HanXRQChr08g0225461 Helianthus annuus HOM05D001473 ORTHO05D003934 1.5e-10 71.2 244 31.1
AL1G20320 Arabidopsis lyrata HOM05D001473 ORTHO05D003934 1.9e-10 70.9 192 33.3
AT1G09770 Arabidopsis thaliana HOM05D001473 ORTHO05D003934 2.5e-10 70.5 192 31.8
SalBow1G0011 Salvia bowleyana HOM05D001473 ORTHO05D003934 3.3e-10 70.1 72 51.4
THA.LOC104823763 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 5.7e-10 69.3 219 32.4
PSO017G2945 Papaver somniferum HOM05D001473 ORTHO05D003934 7.4e-10 68.9 226 31.0
AagrBONN_evm.TU.Sc2ySwM_368.3249 Anthoceros agrestis HOM05D001473 ORTHO05D003934 9.7e-10 68.6 71 47.9
SEGI_38835 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 1.3e-09 68.2 200 29.5
BraA08t35347Z Brassica rapa HOM05D001473 ORTHO05D003934 2.8e-09 67.0 150 36.0
Pp3c3_17580 Physcomitrium patens HOM05D001473 ORTHO05D003934 3.7e-09 66.6 149 34.9
SEGI_20641 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 3.7e-09 66.6 197 32.0
C05p07840 Brassica napus HOM05D001473 ORTHO05D003934 8.2e-09 65.5 192 33.3
BolC5t29535H Brassica oleracea HOM05D001473 ORTHO05D003934 8.2e-09 65.5 192 33.3
Carub.0001s0911 Capsella rubella HOM05D001473 ORTHO05D003934 1.8e-08 64.3 148 34.5
A06p06440 Brassica napus HOM05D001473 ORTHO05D003934 2.4e-08 63.9 200 33.0
BraA06t23855Z Brassica rapa HOM05D001473 ORTHO05D003934 2.4e-08 63.9 200 33.0
unitig_747.g21794 Utricularia gibba HOM05D001473 ORTHO05D003934 4.1e-08 63.2 220 29.1
Mapoly0014s0195 Marchantia polymorpha HOM05D001473 ORTHO05D003934 6.9e-08 62.4 304 26.6
A08p34350 Brassica napus HOM05D001473 ORTHO05D003934 2.6e-07 60.5 209 32.1
C08p13180 Brassica napus HOM05D001473 ORTHO05D003934 2.6e-07 60.5 209 32.1
BolC8t48947H Brassica oleracea HOM05D001473 ORTHO05D003934 2.6e-07 60.5 209 32.1
DCAR_029377 Daucus carota HOM05D001473 ORTHO05D003934 2.6e-07 60.5 148 31.8


User provided reference genes

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