Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0020600 Salix brachista HOM05D002170 ORTHO05D005003 1.3e-42 176.0 94 100.0
Potri.018G017200 Populus trichocarpa HOM05D002170 ORTHO05D005003 3.4e-38 161.4 86 98.8
Potri.006G265700 Populus trichocarpa HOM05D002170 ORTHO05D005003 9.9e-38 159.8 86 96.5
MD15G1042300 Malus domestica HOM05D002170 ORTHO05D005003 4.9e-37 157.5 86 95.3
PGR044G1237 Punica granatum HOM05D002170 ORTHO05D005003 1.1e-36 156.4 86 93.0
MD08G1054700 Malus domestica HOM05D002170 ORTHO05D005003 1.4e-36 156.0 86 94.2
GSVIVG01035985001 Vitis vinifera HOM05D002170 ORTHO05D005003 1.4e-36 156.0 86 93.0
Psat1g044520 Pisum sativum HOM05D002170 ORTHO05D005003 1.9e-36 155.6 86 94.2
TPR.G6144 Trifolium pratense HOM05D002170 ORTHO05D005003 1.9e-36 155.6 86 94.2
VMungo0251G1008 Vigna mungo HOM05D002170 ORTHO05D005003 4.2e-36 154.5 90 88.9
Lj4g0016988 Lotus japonicus HOM05D002170 ORTHO05D005003 5.4e-36 154.1 86 93.0
Medtr8g070490 Medicago truncatula HOM05D002170 ORTHO05D005003 5.4e-36 154.1 86 93.0
Sabra06G0208300 Salix brachista HOM05D002170 ORTHO05D005003 5.4e-36 154.1 93 88.2
Duzib187G0716 Durio zibethinus HOM05D002170 ORTHO05D005003 7.1e-36 153.7 86 93.0
Lalb_Chr09g0334601 Lupinus albus HOM05D002170 ORTHO05D005003 1.6e-35 152.5 86 93.0
RcHm_v2.0_Chr6g0299281 Rosa chinensis HOM05D002170 ORTHO05D005003 1.6e-35 152.5 86 91.9
Cpa.g.sc148.25 Carica papaya HOM05D002170 ORTHO05D005003 2.1e-35 152.1 86 90.7
Thecc.09G014300 Theobroma cacao HOM05D002170 ORTHO05D005003 2.1e-35 152.1 86 91.9
arahy.Tifrunner.gnm1.ann1.B0P3FA Arachis hypogaea HOM05D002170 ORTHO05D005003 2.7e-35 151.8 91 86.8
arahy.Tifrunner.gnm1.ann1.Q77VDD Arachis hypogaea HOM05D002170 ORTHO05D005003 2.7e-35 151.8 91 86.8
FvH4_2g41230 Fragaria vesca HOM05D002170 ORTHO05D005003 2.7e-35 151.8 86 90.7
FAN15G1846 Fragaria x ananassa HOM05D002170 ORTHO05D005003 2.7e-35 151.8 86 90.7
FAN27G0183 Fragaria x ananassa HOM05D002170 ORTHO05D005003 2.7e-35 151.8 86 90.7
Phvul.003G275100 Phaseolus vulgaris HOM05D002170 ORTHO05D005003 2.7e-35 151.8 86 90.7
TWI63G1817 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 2.7e-35 151.8 86 90.7
Nn8g40047 Nelumbo nucifera HOM05D002170 ORTHO05D005003 3.5e-35 151.4 87 89.7
TWI32G0518 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 3.5e-35 151.4 86 89.5
CiPaw.08G005300 Carya illinoinensis HOM05D002170 ORTHO05D005003 6.0e-35 150.6 86 93.0
TAR636G2364 Trochodendron aralioides HOM05D002170 ORTHO05D005003 6.0e-35 150.6 86 89.5
Glyma.08G265300 Glycine max HOM05D002170 ORTHO05D005003 7.9e-35 150.2 86 90.7
Glyma.16G095600 Glycine max HOM05D002170 ORTHO05D005003 7.9e-35 150.2 86 90.7
Atru.chr7.2551 Acer truncatum HOM05D002170 ORTHO05D005003 1.0e-34 149.8 89 89.9
CiPaw.07G231100 Carya illinoinensis HOM05D002170 ORTHO05D005003 1.0e-34 149.8 86 90.7
Eucgr.C04040 Eucalyptus grandis HOM05D002170 ORTHO05D005003 1.3e-34 149.4 86 89.5
Gohir.D06G104300 Gossypium hirsutum HOM05D002170 ORTHO05D005003 1.3e-34 149.4 86 90.7
Gorai.010G119500 Gossypium raimondii HOM05D002170 ORTHO05D005003 1.3e-34 149.4 86 90.7
Gohir.A06G109900 Gossypium hirsutum HOM05D002170 ORTHO05D005003 1.8e-34 149.1 86 89.5
QL02p018561 Quercus lobata HOM05D002170 ORTHO05D005003 1.8e-34 149.1 86 89.5
Duzib150G1070 Durio zibethinus HOM05D002170 ORTHO05D005003 2.3e-34 148.7 86 89.5
Lj7A736G82 Lonicera japonica HOM05D002170 ORTHO05D005003 8.7e-34 146.7 87 89.7
MBI15_g08396_MAGBIO Magnolia biondii HOM05D002170 ORTHO05D005003 8.7e-34 146.7 87 86.2
CANSAT11G1789 Cannabis sativa HOM05D002170 ORTHO05D005003 1.9e-33 145.6 86 87.2
Duzib168G2019 Durio zibethinus HOM05D002170 ORTHO05D005003 2.5e-33 145.2 86 88.4
Nn2g14023 Nelumbo nucifera HOM05D002170 ORTHO05D005003 3.3e-33 144.8 86 86.0
Ciclev10007357m.g Citrus clementina HOM05D002170 ORTHO05D005003 7.4e-33 143.7 86 88.4
CDE05G2090 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 9.6e-33 143.3 86 88.4
PSO063G0760 Papaver somniferum HOM05D002170 ORTHO05D005003 1.6e-32 142.5 86 83.7
PSO782G3858 Papaver somniferum HOM05D002170 ORTHO05D005003 1.6e-32 142.5 86 83.7
CDE02G0333 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 2.8e-32 141.7 86 87.2
DCAR_004512 Daucus carota HOM05D002170 ORTHO05D005003 4.8e-32 141.0 86 86.0
ClCG08G013750 Citrullus lanatus HOM05D002170 ORTHO05D005003 6.2e-32 140.6 86 87.2
MELO3C011306.2 Cucumis melo HOM05D002170 ORTHO05D005003 6.2e-32 140.6 86 87.2
CsaV3_2G032530 Cucumis sativus L. HOM05D002170 ORTHO05D005003 6.2e-32 140.6 86 87.2
Sed0020863 Sechium edule HOM05D002170 ORTHO05D005003 6.2e-32 140.6 86 87.2
Dinv10283 Davidia involucrata HOM05D002170 ORTHO05D005003 1.1e-31 139.8 84 86.9
Dinv18466 Davidia involucrata HOM05D002170 ORTHO05D005003 9.0e-31 136.7 84 84.5
Prupe.1G395500 Prunus persica HOM05D002170 ORTHO05D005003 9.0e-31 136.7 86 82.6
EL10Ac7g17340 Beta vulgaris HOM05D002170 ORTHO05D005003 1.5e-30 136.0 89 79.8
Sed0005523 Sechium edule HOM05D002170 ORTHO05D005003 2.0e-30 135.6 86 84.9
Aqoxy7G03347 Aquilegia oxysepala HOM05D002170 ORTHO05D005003 3.4e-30 134.8 86 81.4
Sp6g32650 Schrenkiella parvula HOM05D002170 ORTHO05D005003 3.4e-30 134.8 86 83.7
Sp2g22460 Schrenkiella parvula HOM05D002170 ORTHO05D005003 5.8e-30 134.0 86 86.0
AL6G36690 Arabidopsis lyrata HOM05D002170 ORTHO05D005003 7.6e-30 133.7 86 86.0
AT5G25060 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 7.6e-30 133.7 86 86.0
Actinidia23116 Actinidia chinensis HOM05D002170 ORTHO05D005003 1.3e-29 132.9 86 83.7
Ah.15g090090 Amaranthus hybridus HOM05D002170 ORTHO05D005003 1.3e-29 132.9 86 80.2
Aa31LG3G16300 Aethionema arabicum HOM05D002170 ORTHO05D005003 1.7e-29 132.5 86 83.7
BcaNung03197 Brassica carinata HOM05D002170 ORTHO05D005003 2.9e-29 131.7 86 83.7
CARHR188430 Cardamine hirsuta HOM05D002170 ORTHO05D005003 2.9e-29 131.7 86 84.9
Actinidia14137 Actinidia chinensis HOM05D002170 ORTHO05D005003 3.8e-29 131.3 86 83.7
Ca_22543_v3 Cicer arietinum L. HOM05D002170 ORTHO05D005003 3.8e-29 131.3 71 94.4
Thhalv10003609m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 3.8e-29 131.3 86 84.9
BcaC04g23569 Brassica carinata HOM05D002170 ORTHO05D005003 4.9e-29 131.0 86 82.6
A09p06320 Brassica napus HOM05D002170 ORTHO05D005003 4.9e-29 131.0 86 82.6
Gohir.D08G274700 Gossypium hirsutum HOM05D002170 ORTHO05D005003 8.4e-29 130.2 86 80.2
Gorai.004G293200 Gossypium raimondii HOM05D002170 ORTHO05D005003 8.4e-29 130.2 86 80.2
CSS0015318 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D005003 1.4e-28 129.4 86 80.2
Carub.0006s2289 Capsella rubella HOM05D002170 ORTHO05D005003 1.4e-28 129.4 86 82.6
Gohir.A08G253000 Gossypium hirsutum HOM05D002170 ORTHO05D005003 3.2e-28 128.3 86 81.4
Manes.16G131000 Manihot esculenta HOM05D002170 ORTHO05D005003 4.2e-28 127.9 86 79.1
Rhsim02G0216100 Rhododendron simsii HOM05D002170 ORTHO05D005003 5.5e-28 127.5 86 80.2
BolC9t53617H Brassica oleracea HOM05D002170 ORTHO05D005003 7.1e-28 127.1 86 81.4
BraA09t36277Z Brassica rapa HOM05D002170 ORTHO05D005003 7.1e-28 127.1 86 81.4
BcaB04g19807 Brassica carinata HOM05D002170 ORTHO05D005003 9.3e-28 126.7 86 81.4
Lalb_Chr05g0229031 Lupinus albus HOM05D002170 ORTHO05D005003 1.6e-27 125.9 86 80.2
Ah.01g016890 Amaranthus hybridus HOM05D002170 ORTHO05D005003 4.6e-27 124.4 86 74.4
ATR0749G037 Amborella trichopoda HOM05D002170 ORTHO05D005003 1.0e-26 123.2 87 79.3
vmacro11266 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 1.0e-26 123.2 86 77.9
MSTRG.25828 Avicennia marina HOM05D002170 ORTHO05D005003 3.0e-26 121.7 80 83.8
SalBow4G1870 Salvia bowleyana HOM05D002170 ORTHO05D005003 3.0e-26 121.7 79 83.5
Sopen03g004110 Solanum pennellii HOM05D002170 ORTHO05D005003 5.1e-26 120.9 79 82.3
Nitab4.5_0005295g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 8.7e-26 120.2 90 76.7
Oeu009655.1 Olea europaea HOM05D002170 ORTHO05D005003 8.7e-26 120.2 80 78.8
Cc08_g07300 Coffea canephora HOM05D002170 ORTHO05D005003 1.5e-25 119.4 79 79.7
HanXRQChr03g0081441 Helianthus annuus HOM05D002170 ORTHO05D005003 1.5e-25 119.4 86 80.2
Nitab4.5_0001894g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 1.9e-25 119.0 79 81.0
Sc07g0003300 Simmondsia chinensis HOM05D002170 ORTHO05D005003 1.9e-25 119.0 86 75.6
Solyc03g025280.4 Solanum lycopersicum HOM05D002170 ORTHO05D005003 1.9e-25 119.0 79 81.0
Lsat_1_v5_gn_5_62020 Lactuca sativa HOM05D002170 ORTHO05D005003 3.3e-25 118.2 86 80.2
Peaxi162Scf00227g00611 Petunia axillaris HOM05D002170 ORTHO05D005003 3.3e-25 118.2 90 75.6
Peaxi162Scf00688g00229 Petunia axillaris HOM05D002170 ORTHO05D005003 4.3e-25 117.9 80 81.2
AUR62040507 Chenopodium quinoa HOM05D002170 ORTHO05D005003 5.6e-25 117.5 70 84.3
Nitab4.5_0000927g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 9.6e-25 116.7 87 79.3
AUR62042299 Chenopodium quinoa HOM05D002170 ORTHO05D005003 1.3e-24 116.3 70 82.9
Nitab4.5_0001798g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 1.6e-24 115.9 87 78.2
Migut.E01450 Erythranthe guttata HOM05D002170 ORTHO05D005003 3.7e-24 114.8 79 75.9
Nitab4.5_0000748g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 2.4e-23 112.1 80 78.8
HanXRQChr13g0412271 Helianthus annuus HOM05D002170 ORTHO05D005003 5.3e-23 110.9 86 76.7
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 4.5e-22 107.8 64 84.4
Zm00001eb233960 Zea mays HOM05D002170 ORTHO05D005003 5.8e-22 107.5 81 70.4
Zm00001eb234030 Zea mays HOM05D002170 ORTHO05D005003 5.8e-22 107.5 81 70.4
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 1.0e-21 106.7 61 86.9
vmacro16501 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 1.7e-21 105.9 86 70.9
HPP92_017465 Vanilla planifolia HOM05D007008 ORTHO05D008622 1.4e-20 102.8 72 77.8
Haze_21390 Corylus avellana HOM05D002170 ORTHO05D005003 3.2e-20 101.7 62 82.3
Pp3c24_10060 Physcomitrium patens HOM05D002170 ORTHO05D005003 5.5e-20 100.9 68 72.1
Pp3c24_10090 Physcomitrium patens HOM05D002170 ORTHO05D005003 5.5e-20 100.9 68 72.1
Pp3c23_11510 Physcomitrium patens HOM05D002170 ORTHO05D005003 7.1e-20 100.5 68 72.1
SEGI_31632 Sequoiadendron giganteum HOM05D002170 ORTHO05D005003 8.7e-18 93.6 86 59.3
SMO347G0495 Selaginella moellendorffii HOM05D002170 ORTHO05D005003 4.3e-17 91.3 80 58.8
Oeu021911.1 Olea europaea HOM05D002170 ORTHO05D005003 7.4e-17 90.5 80 66.2
ECA240G4525 Erigeron canadensis HOM05D002170 ORTHO05D005003 1.6e-16 89.4 86 60.5
Mapoly0144s0002 Marchantia polymorpha HOM05D002170 ORTHO05D005003 4.8e-16 87.8 100 53.0
SEGI_25040 Sequoiadendron giganteum HOM05D002170 ORTHO05D005003 4.8e-16 87.8 67 64.2
CBR_g26149 Chara braunii HOM05D002170 ORTHO05D005003 6.3e-16 87.4 86 55.8
Pp3s245_40 Physcomitrium patens HOM05D002170 ORTHO05D005003 2.9e-13 78.6 57 66.7
Carub.0006s0931 Capsella rubella HOM05D002170 ORTHO05D005003 2.5e-12 75.5 85 56.5
BNapus_Darmor_BZH_scaffold_241p00050 Brassica napus HOM05D002170 ORTHO05D005003 1.2e-11 73.2 77 59.7
Cre03.g158150 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D005003 3.9e-10 68.2 68 58.8
TAR636G0681 Trochodendron aralioides HOM05D000200 ORTHO05D000262 2.8e-08 62.0 36 80.6
MCO02G189 Micromonas commoda HOM05D002170 ORTHO05D005003 9.1e-07 57.0 78 39.7
A06p35810 Brassica napus HOM05D002170 ORTHO05D005003 4.5e-06 54.7 46 65.2


User provided reference genes

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