Gene: Nitab4.5_0000927g0020
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0000927g0020
- Transcript Identifier Nitab4.5_0000927g0020.1
- Gene Type Coding gene
- Location Nitab4.5_0000927 : 226721-244927 : negative
Gene Family Information
- ID HOM05D002170
- #Genes/#Species 309/100
- Phylogenetic origin
- ID ORTHO05D005003
- #Genes/#Species 166/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0000927g0020.1
- SR1-identifier Nta06g01840.1
Descriptions
- Description ENTH/VHS, CID domain, RNA recognition motif domain, Nucleotide-binding, alpha-beta plait, SWAP/Surp, mRNA splicing factor, Cwf21
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000061 | SWAP/Surp |
| IPR000504 | RNA recognition motif domain |
| IPR035967 | SWAP/Surp superfamily |
| IPR006569 | CID domain |
| IPR013170 | mRNA splicing factor Cwf21 domain |
| IPR035009 | SR140, RNA recognition motif |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR008942 | ENTH/VHS |
| Mapman id | Description |
|---|---|
| 16.2.1.2.10 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).snRNP-associated protein (SR140) |