Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0002400 Salix brachista HOM05D002718 ORTHO05D003269 9.0e-93 343.6 175 100.0
Sabra18G0006300 Salix brachista HOM05D002718 ORTHO05D003269 5.4e-45 184.9 214 57.0
Sabra18G0002900 Salix brachista HOM05D002718 ORTHO05D003269 1.6e-44 183.3 206 57.3
Sabra18G0006600 Salix brachista HOM05D002718 ORTHO05D003269 1.6e-44 183.3 206 57.3
Sabra18G0008300 Salix brachista HOM05D002718 ORTHO05D003269 1.6e-44 183.3 206 57.3
Sabra18G0009800 Salix brachista HOM05D002718 ORTHO05D003269 1.6e-44 183.3 206 57.3
Potri.018G003100 Populus trichocarpa HOM05D002718 ORTHO05D003269 3.5e-44 182.2 206 56.8
CSS0012006 Camellia sinensis var. sinensis HOM05D002718 ORTHO05D003269 1.1e-42 177.2 206 54.9
FAN20G1933 Fragaria x ananassa HOM05D002718 ORTHO05D003269 2.1e-41 172.9 204 54.4
Manes.16G137600 Manihot esculenta HOM05D002718 ORTHO05D003269 2.1e-41 172.9 206 54.4
Cfa013311 Carpinus fangiana HOM05D002718 ORTHO05D003269 3.6e-41 172.2 206 53.9
CiPaw.08G021400 Carya illinoinensis HOM05D002718 ORTHO05D003269 3.6e-41 172.2 206 52.9
Dinv38809 Davidia involucrata HOM05D002718 ORTHO05D003269 3.6e-41 172.2 206 54.4
QL12p025880 Quercus lobata HOM05D002718 ORTHO05D003269 8.0e-41 171.0 206 54.4
RcHm_v2.0_Chr6g0305421 Rosa chinensis HOM05D002718 ORTHO05D003269 8.0e-41 171.0 206 53.9
Thecc.09G002800 Theobroma cacao HOM05D002718 ORTHO05D003269 8.0e-41 171.0 206 53.4
Hund03264 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.0e-40 170.6 207 52.7
GSVIVG01035565001 Vitis vinifera HOM05D002718 ORTHO05D003269 1.4e-40 170.2 206 53.9
Aqoxy4G00376 Aquilegia oxysepala HOM05D002718 ORTHO05D003269 1.8e-40 169.9 206 53.9
CANSAT25G2302 Cannabis sativa HOM05D002718 ORTHO05D003269 1.8e-40 169.9 206 52.9
COL.COLO4_18626 Corchorus olitorius HOM05D002718 ORTHO05D003269 1.8e-40 169.9 206 53.9
Duzib168G0110 Durio zibethinus HOM05D002718 ORTHO05D003269 1.8e-40 169.9 206 53.4
FvH4_2g36460 Fragaria vesca HOM05D002718 ORTHO05D003269 1.8e-40 169.9 206 53.4
FAN27G0986 Fragaria x ananassa HOM05D002718 ORTHO05D003269 1.8e-40 169.9 206 53.4
Actinidia25741 Actinidia chinensis HOM05D002718 ORTHO05D003269 2.3e-40 169.5 206 53.9
Ciclev10007339m.g Citrus clementina HOM05D002718 ORTHO05D003269 2.3e-40 169.5 206 53.4
Hma1.2p1_0331F.1_g127520 Hydrangea macrophylla HOM05D002718 ORTHO05D003269 2.3e-40 169.5 206 53.9
ECA246G1707 Erigeron canadensis HOM05D002718 ORTHO05D003269 3.0e-40 169.1 206 53.9
vmacro08496 Vaccinium macrocarpon HOM05D002718 ORTHO05D003269 3.0e-40 169.1 207 52.7
vmacro23159 Vaccinium macrocarpon HOM05D002718 ORTHO05D003269 3.0e-40 169.1 207 52.7
FAN15G0923 Fragaria x ananassa HOM05D002718 ORTHO05D003269 4.0e-40 168.7 206 53.4
Gohir.D06G109800 Gossypium hirsutum HOM05D002718 ORTHO05D003269 4.0e-40 168.7 206 52.9
Gorai.010G124600 Gossypium raimondii HOM05D002718 ORTHO05D003269 4.0e-40 168.7 206 52.9
Lsat_1_v5_gn_3_26460 Lactuca sativa HOM05D002718 ORTHO05D003269 4.0e-40 168.7 206 53.9
MELO3C018969.2 Cucumis melo HOM05D002718 ORTHO05D003269 5.2e-40 168.3 206 52.9
HanXRQChr17g0539291 Helianthus annuus HOM05D002718 ORTHO05D003269 5.2e-40 168.3 206 53.4
Nn8g41097 Nelumbo nucifera HOM05D002718 ORTHO05D003269 5.2e-40 168.3 206 53.4
Nitab4.5_0000970g0150 Nicotiana tabacum HOM05D002718 ORTHO05D003269 6.8e-40 167.9 206 52.4
AUR62020642 Chenopodium quinoa HOM05D002718 ORTHO05D003269 1.2e-39 167.2 183 54.6
Haze_21795 Corylus avellana HOM05D002718 ORTHO05D003269 1.2e-39 167.2 258 45.7
CsaV3_4G009070 Cucumis sativus L. HOM05D002718 ORTHO05D003269 1.2e-39 167.2 206 52.9
Sabra18G0008500 Salix brachista HOM05D002718 ORTHO05D003269 1.2e-39 167.2 168 59.5
SalBow4G0158 Salvia bowleyana HOM05D002718 ORTHO05D003269 1.2e-39 167.2 206 51.9
Haze_19055 Corylus avellana HOM05D002718 ORTHO05D003269 1.5e-39 166.8 212 50.9
Glyma.17G194400 Glycine max HOM05D002718 ORTHO05D003269 1.5e-39 166.8 206 53.4
CANSAT35G0611 Cannabis sativa HOM05D002718 ORTHO05D003269 2.0e-39 166.4 206 51.9
DCAR_000671 Daucus carota HOM05D002718 ORTHO05D003269 2.0e-39 166.4 206 53.4
Glyma.14G138300 Glycine max HOM05D002718 ORTHO05D003269 2.0e-39 166.4 206 52.9
Sed0009215 Sechium edule HOM05D002718 ORTHO05D003269 2.0e-39 166.4 206 52.4
SEGI_20112 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 2.0e-39 166.4 201 52.7
arahy.Tifrunner.gnm1.ann1.NA6C8E Arachis hypogaea HOM05D002718 ORTHO05D003269 2.6e-39 166.0 206 53.9
ATR0626G149 Amborella trichopoda HOM05D002718 ORTHO05D003269 3.4e-39 165.6 206 53.4
MSTRG.25768 Avicennia marina HOM05D002718 ORTHO05D003269 3.4e-39 165.6 206 52.4
CAN.G480.17 Capsicum annuum HOM05D002718 ORTHO05D003269 3.4e-39 165.6 201 51.2
Prupe.1G456000 Prunus persica HOM05D002718 ORTHO05D003269 3.4e-39 165.6 206 52.4
Gohir.A06G107500 Gossypium hirsutum HOM05D002718 ORTHO05D003269 4.4e-39 165.2 206 51.9
Rhsim04G0184400 Rhododendron simsii HOM05D002718 ORTHO05D003269 4.4e-39 165.2 203 52.7
Cc11_g03230 Coffea canephora HOM05D002718 ORTHO05D003269 5.7e-39 164.9 206 52.4
Eucgr.C02132 Eucalyptus grandis HOM05D002718 ORTHO05D003269 5.7e-39 164.9 206 52.4
Nitab4.5_0001942g0140 Nicotiana tabacum HOM05D002718 ORTHO05D003269 5.7e-39 164.9 206 51.9
Solyc08g069231.1 Solanum lycopersicum HOM05D002718 ORTHO05D003269 5.7e-39 164.9 206 51.9
Sopen08g022860 Solanum pennellii HOM05D002718 ORTHO05D003269 5.7e-39 164.9 206 51.9
TWI32G0829 Tripterygium wilfordii HOM05D002718 ORTHO05D003269 5.7e-39 164.9 206 52.9
Ca_12844_v3 Cicer arietinum L. HOM05D002718 ORTHO05D003269 7.5e-39 164.5 203 54.2
Lalb_Chr22g0361171 Lupinus albus HOM05D002718 ORTHO05D003269 9.8e-39 164.1 206 52.9
MBI16_g37213_MAGBIO Magnolia biondii HOM05D002718 ORTHO05D003269 9.8e-39 164.1 201 52.2
THA.LOC104802597 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 9.8e-39 164.1 206 52.4
arahy.Tifrunner.gnm1.ann1.YWBJ1A Arachis hypogaea HOM05D002718 ORTHO05D003269 1.3e-38 163.7 206 53.4
Cpa.g.sc148.1 Carica papaya HOM05D002718 ORTHO05D003269 1.3e-38 163.7 206 52.4
PSO170G4524 Papaver somniferum HOM05D002718 ORTHO05D003269 1.3e-38 163.7 206 51.5
SGA_v2.0_scaffold27G11655 Striga asiatica HOM05D002718 ORTHO05D003269 1.3e-38 163.7 206 51.5
ClCG10G008570 Citrullus lanatus HOM05D002718 ORTHO05D003269 1.7e-38 163.3 211 52.1
Os02g0141300 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 1.7e-38 163.3 200 52.0
Peaxi162Scf00213g00943 Petunia axillaris HOM05D002718 ORTHO05D003269 1.7e-38 163.3 206 51.9
Aa31LG10G6050 Aethionema arabicum HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.9
CARHR222420 Cardamine hirsuta HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.9
CiPaw.07G209700 Carya illinoinensis HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.9
Thhalv10024313m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.9
Lj5g0024079 Lotus japonicus HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 52.9
MD08G1124400 Malus domestica HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.5
PGR084G0004 Punica granatum HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.9
PGR142G1783 Punica granatum HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.9
Sp7g14590 Schrenkiella parvula HOM05D002718 ORTHO05D003269 2.2e-38 162.9 206 51.9
AL7G39040 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
AT4G16130 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
BcaC09g50300 Brassica carinata HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
BcaNung00226 Brassica carinata HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
A01p21500 Brassica napus HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
C01p26840 Brassica napus HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
BolC1t02628H Brassica oleracea HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
BraA01t02056Z Brassica rapa HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
Carub.0007s2548 Capsella rubella HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
MD15G1103100 Malus domestica HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.5
THA.LOC104820278 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 51.9
TPR.G12004 Trifolium pratense HOM05D002718 ORTHO05D003269 2.9e-38 162.5 206 52.9
Lsat_1_v5_gn_5_56521 Lactuca sativa HOM05D002718 ORTHO05D003269 4.9e-38 161.8 205 51.2
Lj7C753T13 Lonicera japonica HOM05D002718 ORTHO05D003269 6.4e-38 161.4 206 52.4
TAR383G0086 Trochodendron aralioides HOM05D002718 ORTHO05D003269 6.4e-38 161.4 206 51.0
Zm00001eb208110 Zea mays HOM05D002718 ORTHO05D003269 6.4e-38 161.4 200 52.0
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 8.3e-38 161.0 206 50.0
VMungo0647G1266 Vigna mungo HOM05D002718 ORTHO05D003269 8.3e-38 161.0 206 51.9
Manes.03G001300 Manihot esculenta HOM05D002718 ORTHO05D003269 1.1e-37 160.6 244 46.7
Medtr1g009190 Medicago truncatula HOM05D002718 ORTHO05D003269 1.1e-37 160.6 206 51.9
Phvul.001G077700 Phaseolus vulgaris HOM05D002718 ORTHO05D003269 1.1e-37 160.6 206 51.5
AUR62038736 Chenopodium quinoa HOM05D002718 ORTHO05D003269 1.4e-37 160.2 206 50.0
PSO675G2426 Papaver somniferum HOM05D002718 ORTHO05D003269 3.2e-37 159.1 200 51.0
Sc06g0001240 Simmondsia chinensis HOM05D002718 ORTHO05D003269 5.4e-37 158.3 206 50.5
Oeu059291.2 Olea europaea HOM05D002718 ORTHO05D003269 9.2e-37 157.5 206 51.0
Lj3C988G10 Lonicera japonica HOM05D002718 ORTHO05D003269 1.6e-36 156.8 198 51.5
EL10Ac2g03697 Beta vulgaris HOM05D002718 ORTHO05D003269 2.0e-36 156.4 210 48.1
ClCG05G026320 Citrullus lanatus HOM05D002718 ORTHO05D003269 3.5e-36 155.6 201 50.2
HPP92_010414 Vanilla planifolia HOM05D002718 ORTHO05D003269 3.5e-36 155.6 201 50.2
PSO675G7617 Papaver somniferum HOM05D002718 ORTHO05D003269 4.6e-36 155.2 200 50.5
Solyc07g016170.4 Solanum lycopersicum HOM05D002718 ORTHO05D003269 4.6e-36 155.2 198 48.5
Nitab4.5_0001535g0050 Nicotiana tabacum HOM05D002718 ORTHO05D003269 5.9e-36 154.8 201 48.8
Peaxi162Scf00320g00216 Petunia axillaris HOM05D002718 ORTHO05D003269 7.8e-36 154.5 198 49.0
HPP92_017382 Vanilla planifolia HOM05D002718 ORTHO05D003269 7.8e-36 154.5 201 50.2
Thhalv10012582m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 1.7e-35 153.3 206 47.6
Carub.0005s0889 Capsella rubella HOM05D002718 ORTHO05D003269 5.0e-35 151.8 206 47.1
Sp6g17930 Schrenkiella parvula HOM05D002718 ORTHO05D003269 5.0e-35 151.8 206 47.1
THA.LOC104810997 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 5.0e-35 151.8 201 46.8
AL5G21150 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 6.6e-35 151.4 206 47.1
Lalb_Chr08g0243461 Lupinus albus HOM05D002718 ORTHO05D003269 1.1e-34 150.6 208 47.6
Nitab4.5_0000899g0120 Nicotiana tabacum HOM05D002718 ORTHO05D003269 1.1e-34 150.6 201 47.3
MELO3C003601.2 Cucumis melo HOM05D002718 ORTHO05D003269 1.5e-34 150.2 201 48.3
unitig_32.g11648 Utricularia gibba HOM05D002718 ORTHO05D003269 1.5e-34 150.2 200 48.5
MSTRG.11818 Avicennia marina HOM05D002718 ORTHO05D003269 1.9e-34 149.8 206 49.0
GSVIVG01032250001 Vitis vinifera HOM05D002718 ORTHO05D003269 1.9e-34 149.8 206 49.5
AT3G42850 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 3.3e-34 149.1 206 47.6
CsaV3_3G047280 Cucumis sativus L. HOM05D002718 ORTHO05D003269 3.3e-34 149.1 201 48.3
BcaB08g35974 Brassica carinata HOM05D002718 ORTHO05D003269 4.3e-34 148.7 201 46.3
BcaC04g20159 Brassica carinata HOM05D002718 ORTHO05D003269 4.3e-34 148.7 201 46.3
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 4.3e-34 148.7 201 46.3
BolC9t57573H Brassica oleracea HOM05D002718 ORTHO05D003269 4.3e-34 148.7 201 46.3
Cc00_g00350 Coffea canephora HOM05D002718 ORTHO05D003269 5.6e-34 148.3 205 48.8
DCAR_004565 Daucus carota HOM05D002718 ORTHO05D003269 5.6e-34 148.3 168 54.2
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 9.5e-34 147.5 201 45.8
BraA10t43426Z Brassica rapa HOM05D002718 ORTHO05D003269 9.5e-34 147.5 201 45.8
CAN.G600.6 Capsicum annuum HOM05D002718 ORTHO05D003269 1.2e-33 147.1 198 47.5
QL11p011549 Quercus lobata HOM05D002718 ORTHO05D003269 1.2e-33 147.1 200 47.0
Potri.018G138204 Populus trichocarpa HOM05D002718 ORTHO05D003269 2.1e-33 146.4 208 47.6
Potri.018G145700 Populus trichocarpa HOM05D002718 ORTHO05D003269 2.1e-33 146.4 208 47.6
Oeu028830.2 Olea europaea HOM05D002718 ORTHO05D003269 3.6e-33 145.6 206 48.1
Sabra18G0120000 Salix brachista HOM05D002718 ORTHO05D003269 3.6e-33 145.6 208 47.6
Sabra18G0127600 Salix brachista HOM05D002718 ORTHO05D003269 3.6e-33 145.6 208 47.6
HanXRQChr12g0384051 Helianthus annuus HOM05D002718 ORTHO05D003269 8.0e-33 144.4 204 48.5
Os06g0702500 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 1.8e-32 143.3 210 44.8
Nn5g27632 Nelumbo nucifera HOM05D002718 ORTHO05D003269 4.0e-32 142.1 201 44.8
unitig_748.g8176 Utricularia gibba HOM05D002718 ORTHO05D003269 4.4e-31 138.7 201 44.3
Psat6g034400 Pisum sativum HOM05D002718 ORTHO05D003269 1.3e-30 137.1 145 58.6
Zm00001eb227090 Zea mays HOM05D002718 ORTHO05D003269 1.7e-30 136.7 205 44.4
Migut.A00453 Erythranthe guttata HOM05D002718 ORTHO05D003269 6.4e-30 134.8 145 55.9
MSTRG.10465 Avicennia marina HOM05D002718 ORTHO05D003269 1.1e-29 134.0 201 42.8
Sabra18G0016400 Salix brachista HOM05D002718 ORTHO05D003269 1.4e-29 133.7 114 68.4
SalBow5G2825 Salvia bowleyana HOM05D002718 ORTHO05D003269 3.2e-29 132.5 198 43.9
Pp3c16_4920 Physcomitrium patens HOM05D002718 ORTHO05D003269 5.4e-29 131.7 201 41.3
Pp3c6_8620 Physcomitrium patens HOM05D002718 ORTHO05D003269 5.4e-29 131.7 201 39.8
Dinv37495 Davidia involucrata HOM05D002718 ORTHO05D003269 2.0e-28 129.8 187 47.1
Mapoly0043s0024 Marchantia polymorpha HOM05D002718 ORTHO05D003269 2.0e-28 129.8 201 43.3
QL11p009227 Quercus lobata HOM05D002718 ORTHO05D003269 3.5e-28 129.0 190 45.3
SMO146G0086 Selaginella moellendorffii HOM05D002718 ORTHO05D003269 4.6e-28 128.6 201 41.3
Hund19395 Selenicereus undatus HOM05D002718 ORTHO05D003269 3.0e-27 125.9 201 42.8
A02p20940 Brassica napus HOM05D002718 ORTHO05D003269 7.3e-26 121.3 91 72.5
Actinidia03340 Actinidia chinensis HOM05D002718 ORTHO05D003269 8.1e-25 117.9 122 58.2
A04p21730 Brassica napus HOM05D002718 ORTHO05D003269 1.1e-24 117.5 91 70.3
SHI02366 Sapria himalayana HOM05D002718 ORTHO05D003269 1.1e-24 117.5 132 55.3
A09p58030 Brassica napus HOM05D002718 ORTHO05D003269 1.4e-24 117.1 114 60.5
Zm00001eb315700 Zea mays HOM05D002718 ORTHO05D003269 2.3e-24 116.3 113 59.3
AagrBONN_evm.TU.Sc2ySwM_117.407 Anthoceros agrestis HOM05D002718 ORTHO05D003269 6.8e-24 114.8 201 38.3
SEGI_12182 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 1.2e-23 114.0 114 55.3
Zm00001eb347750 Zea mays HOM05D002718 ORTHO05D003269 1.5e-23 113.6 113 58.4
A08p23110 Brassica napus HOM05D002718 ORTHO05D003269 2.0e-23 113.2 114 59.6
Sabra18G0008800 Salix brachista HOM05D003482 ORTHO05D004194 6.0e-20 101.7 87 65.5
BcaC05g26867 Brassica carinata HOM05D002718 ORTHO05D003269 1.1e-18 97.4 92 63.0
CBR_g29486 Chara braunii HOM05D002718 ORTHO05D003269 4.3e-18 95.5 202 34.7
Psat0s2005g0120 Pisum sativum HOM05D002718 ORTHO05D003269 1.2e-17 94.0 116 53.4
Cpa.g.sc115.31 Carica papaya HOM05D002718 ORTHO05D003269 6.2e-17 91.7 138 43.5
BolC5t31465H Brassica oleracea HOM05D002718 ORTHO05D003269 9.9e-15 84.3 53 79.2
A03p54460 Brassica napus HOM05D002718 ORTHO05D003269 1.7e-14 83.6 53 81.1
BraA03t14512Z Brassica rapa HOM05D002718 ORTHO05D003269 1.7e-14 83.6 53 81.1
Haze_18803 Corylus avellana HOM05D002718 ORTHO05D003269 2.4e-13 79.7 53 77.4
Sopen07g005900 Solanum pennellii HOM05D002718 ORTHO05D003269 7.1e-13 78.2 92 50.0
PRCOL_00002758 Prasinoderma coloniale HOM05D002718 ORTHO05D003269 3.5e-12 75.9 204 32.4
SEGI_40544 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 1.0e-11 74.3 95 44.2
CDE07G1244 Ceratophyllum demersum HOM05D002718 ORTHO05D003027 6.8e-08 61.6 55 60.0
SEGI_39420 Sequoiadendron giganteum HOM05D003834 ORTHO05D004483 1.7e-06 57.0 64 53.1
Atru.chr8.1462 Acer truncatum HOM05D002718 ORTHO05D003269 2.2e-06 56.6 34 85.3


User provided reference genes

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