Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 1.3e-143 513.1 266 100.0
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 4.7e-125 451.4 241 96.7
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 2.2e-82 309.7 229 72.5
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.4e-76 289.7 227 69.6
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 3.1e-76 289.3 223 69.5
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 8.9e-76 287.7 221 70.1
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.5e-75 287.0 227 67.8
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.3e-74 283.9 226 67.7
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 1.3e-74 283.9 259 61.4
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 1.7e-74 283.5 246 63.8
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 3.8e-74 282.3 224 69.6
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 6.4e-74 281.6 225 69.3
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 3.2e-73 279.3 230 69.1
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 3.2e-73 279.3 244 63.5
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 7.1e-73 278.1 239 63.2
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 2.1e-72 276.6 245 63.3
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 2.7e-72 276.2 241 64.7
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 2.7e-72 276.2 241 64.7
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.7e-72 276.2 241 64.7
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 3.5e-72 275.8 243 63.4
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 7.8e-72 274.6 223 69.5
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 3.9e-71 272.3 227 66.1
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 5.1e-71 271.9 221 67.9
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 6.6e-71 271.6 231 64.1
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 8.6e-71 271.2 228 64.5
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.1e-70 270.8 243 62.1
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.1e-70 270.8 242 62.0
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 1.1e-70 270.8 227 65.2
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 1.5e-70 270.4 241 62.7
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 1.5e-70 270.4 227 63.4
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.3e-70 268.9 242 62.0
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 1.2e-69 267.3 219 67.1
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 1.6e-69 266.9 228 63.6
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 2.8e-69 266.2 243 60.1
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 2.8e-69 266.2 226 64.6
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 6.2e-69 265.0 227 63.9
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 8.1e-69 264.6 220 66.8
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 1.1e-68 264.2 219 66.2
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 1.4e-68 263.8 228 62.7
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 1.4e-68 263.8 227 63.0
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 1.8e-68 263.5 227 62.6
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 2.4e-68 263.1 220 63.2
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 2.4e-68 263.1 227 62.6
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 3.1e-68 262.7 244 60.7
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 3.1e-68 262.7 238 62.6
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 3.1e-68 262.7 226 64.2
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 5.2e-68 261.9 259 56.4
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 5.2e-68 261.9 248 60.5
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 6.9e-68 261.5 219 64.8
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 9.0e-68 261.2 226 61.9
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 1.2e-67 260.8 221 62.9
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 3.4e-67 259.2 227 60.4
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 3.4e-67 259.2 220 63.6
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 7.6e-67 258.1 220 63.6
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 1.3e-66 257.3 223 61.9
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 1.3e-66 257.3 214 65.0
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 1.7e-66 256.9 229 59.8
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 2.2e-66 256.5 212 64.2
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 2.9e-66 256.1 225 62.2
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 2.9e-66 256.1 225 62.2
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 3.8e-66 255.8 249 60.2
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 3.8e-66 255.8 223 61.0
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 4.9e-66 255.4 248 58.9
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 1.4e-65 253.8 220 62.7
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 1.9e-65 253.4 224 61.6
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 1.9e-65 253.4 224 61.6
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 1.9e-65 253.4 201 69.2
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 1.9e-65 253.4 229 62.4
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 2.4e-65 253.1 242 59.9
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 5.4e-65 251.9 223 61.0
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 5.4e-65 251.9 259 56.0
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 7.1e-65 251.5 195 68.2
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 7.1e-65 251.5 220 62.7
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 1.2e-64 250.8 218 62.4
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 4.6e-64 248.8 232 60.3
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 6.0e-64 248.4 214 63.1
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 7.8e-64 248.1 224 59.8
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 1.3e-63 247.3 224 60.7
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 1.3e-63 247.3 263 53.6
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 3.0e-63 246.1 241 57.7
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 3.0e-63 246.1 201 65.7
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.9e-62 243.4 207 64.3
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.3e-62 242.7 224 58.9
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 4.3e-62 242.3 226 58.8
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 4.3e-62 242.3 219 59.4
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 5.6e-62 241.9 228 58.3
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 5.6e-62 241.9 215 60.5
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 7.3e-62 241.5 224 60.7
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 7.3e-62 241.5 228 58.3
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 7.3e-62 241.5 223 61.4
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 9.6e-62 241.1 226 58.8
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 1.3e-61 240.7 221 60.2
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 2.1e-61 240.0 175 69.7
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 4.8e-61 238.8 245 55.1
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 4.8e-61 238.8 220 59.1
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 4.8e-61 238.8 241 56.0
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 8.1e-61 238.0 245 53.9
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 2.4e-60 236.5 244 54.5
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 9.0e-60 234.6 225 57.8
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 9.9e-59 231.1 171 70.2
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 9.9e-59 231.1 224 53.1
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 2.2e-58 229.9 219 54.3
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 3.8e-58 229.2 165 70.9
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 2.1e-56 223.4 200 61.5
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 2.7e-56 223.0 226 55.3
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 4.6e-56 222.2 215 58.1
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 1.3e-55 220.7 163 74.2
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 2.3e-55 219.9 239 52.7
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 5.1e-55 218.8 246 51.6
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 1.1e-54 217.6 175 65.7
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 1.5e-54 217.2 242 50.8
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.6e-53 213.8 201 58.7
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.1e-52 209.5 163 69.9
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 3.4e-51 206.1 259 47.5
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 2.9e-50 203.0 162 67.9
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 1.4e-49 200.7 221 49.8
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 3.2e-49 199.5 232 50.9
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 2.0e-43 180.3 176 51.7
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 2.3e-39 166.8 190 50.5
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 2.5e-38 163.3 163 55.2
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 4.3e-38 162.5 111 73.9
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 5.7e-38 162.2 171 48.0
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 5.1e-31 139.0 130 60.8
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 2.5e-30 136.7 138 55.1
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 1.3e-29 134.4 194 45.9
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.4e-28 131.0 253 39.5
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 5.0e-26 122.5 192 35.9
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 5.5e-25 119.0 119 54.6
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 9.4e-25 118.2 139 48.9
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.5e-22 110.9 102 54.9
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 1.7e-21 107.5 131 48.9
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 3.8e-18 96.3 146 45.9
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 8.8e-15 85.1 72 59.7
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 8.8e-07 58.5 153 32.0
Sc09g0007140 Simmondsia chinensis HOM05D005088 ORTHO05D389638 1.2e-06 58.2 65 50.8


User provided reference genes

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