Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0033100 Salix brachista HOM05D005128 ORTHO05D006227 1.1e-69 266.5 132 100.0
Potri.014G045200 Populus trichocarpa HOM05D005128 ORTHO05D006227 6.1e-33 144.4 71 97.2
Potri.002G136500 Populus trichocarpa HOM05D005128 ORTHO05D006227 2.3e-32 142.5 71 94.4
Nitab4.5_0002874g0020 Nicotiana tabacum HOM05D005128 ORTHO05D006227 3.9e-32 141.7 71 94.4
Nitab4.5_0003553g0110 Nicotiana tabacum HOM05D005128 ORTHO05D006227 3.9e-32 141.7 71 94.4
Solyc01g090450.3 Solanum lycopersicum HOM05D005128 ORTHO05D006227 3.9e-32 141.7 71 94.4
Eucgr.E01576 Eucalyptus grandis HOM05D005128 ORTHO05D006227 5.1e-32 141.4 71 93.0
GSVIVG01018248001 Vitis vinifera HOM05D005128 ORTHO05D006227 5.1e-32 141.4 71 93.0
SGA_v2.0_scaffold52G19215 Striga asiatica HOM05D005128 ORTHO05D006227 6.7e-32 141.0 71 93.0
Peaxi162Scf00030g00515 Petunia axillaris HOM05D005128 ORTHO05D006227 8.7e-32 140.6 71 93.0
TWI14G0708 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.1e-31 140.2 71 91.5
TWI14G1050 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.1e-31 140.2 71 91.5
CSS0048126 Camellia sinensis var. sinensis HOM05D005128 ORTHO05D006227 1.5e-31 139.8 71 91.5
Cc02_g24910 Coffea canephora HOM05D005128 ORTHO05D006227 1.5e-31 139.8 71 93.0
COL.COLO4_12428 Corchorus olitorius HOM05D005128 ORTHO05D006227 1.5e-31 139.8 71 91.5
CsaV3_6G001140 Cucumis sativus L. HOM05D005128 ORTHO05D006227 1.5e-31 139.8 71 91.5
PGR042G1446 Punica granatum HOM05D005128 ORTHO05D006227 1.5e-31 139.8 71 91.5
Thecc.01G392500 Theobroma cacao HOM05D005128 ORTHO05D006227 1.5e-31 139.8 71 91.5
CAN.G362.11 Capsicum annuum HOM05D005128 ORTHO05D006227 1.9e-31 139.4 71 91.5
ClCG11G006910 Citrullus lanatus HOM05D005128 ORTHO05D006227 1.9e-31 139.4 71 90.1
MELO3C008212.2 Cucumis melo HOM05D005128 ORTHO05D006227 1.9e-31 139.4 71 90.1
Sed0016496 Sechium edule HOM05D005128 ORTHO05D006227 1.9e-31 139.4 71 90.1
Sopen01g036240 Solanum pennellii HOM05D005128 ORTHO05D006227 1.9e-31 139.4 71 93.0
ATR0057G123 Amborella trichopoda HOM05D005128 ORTHO05D006227 2.5e-31 139.0 71 90.1
Prupe.2G127400 Prunus persica HOM05D005128 ORTHO05D006227 2.5e-31 139.0 71 90.1
vmacro13485 Vaccinium macrocarpon HOM05D005128 ORTHO05D006227 2.5e-31 139.0 71 90.1
MD02G1216700 Malus domestica HOM05D005128 ORTHO05D006227 3.3e-31 138.7 71 90.1
Ciclev10029559m.g Citrus clementina HOM05D005128 ORTHO05D006227 4.3e-31 138.3 71 91.5
Duzib138G0976 Durio zibethinus HOM05D005128 ORTHO05D006227 4.3e-31 138.3 71 90.1
Gohir.D12G099300 Gossypium hirsutum HOM05D005128 ORTHO05D006227 4.3e-31 138.3 71 90.1
Gorai.008G108000 Gossypium raimondii HOM05D005128 ORTHO05D006227 4.3e-31 138.3 71 90.1
FvH4_7g09830 Fragaria vesca HOM05D005128 ORTHO05D006227 5.7e-31 137.9 71 88.7
FAN03G0006 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.7e-31 137.9 71 88.7
FAN10G0506 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.7e-31 137.9 71 88.7
FAN10G2714 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.7e-31 137.9 71 88.7
MBI04_g34109_MAGBIO Magnolia biondii HOM05D005128 ORTHO05D006227 5.7e-31 137.9 71 88.7
RcHm_v2.0_Chr1g0346991 Rosa chinensis HOM05D005128 ORTHO05D006227 5.7e-31 137.9 71 88.7
TAR374G1117 Trochodendron aralioides HOM05D005128 ORTHO05D006227 5.7e-31 137.9 71 88.7
Manes.01G272200 Manihot esculenta HOM05D005128 ORTHO05D006227 7.4e-31 137.5 71 88.7
Zm00001eb201920 Zea mays HOM05D005128 ORTHO05D006227 7.4e-31 137.5 71 88.7
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 9.7e-31 137.1 71 90.1
CiPaw.13G027900 Carya illinoinensis HOM05D005128 ORTHO05D006227 1.3e-30 136.7 71 90.1
Migut.A00726 Erythranthe guttata HOM05D005128 ORTHO05D006227 1.3e-30 136.7 71 90.1
Nn6g33850 Nelumbo nucifera HOM05D005128 ORTHO05D006227 1.3e-30 136.7 71 87.3
Os11g0557900 Oryza sativa ssp. japonica HOM05D005128 ORTHO05D006227 1.3e-30 136.7 71 87.3
Actinidia40389 Actinidia chinensis HOM05D005128 ORTHO05D006227 1.7e-30 136.3 71 87.3
FAN01G3136 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.7e-30 136.3 102 68.6
FAN03G2425 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.2e-30 136.0 69 88.4
FAN06G2910 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.2e-30 136.0 69 88.4
Gohir.A12G096500 Gossypium hirsutum HOM05D005128 ORTHO05D006227 2.2e-30 136.0 71 87.3
Atru.chr5.161 Acer truncatum HOM05D005128 ORTHO05D006227 2.8e-30 135.6 71 88.7
Cpa.g.sc101.28 Carica papaya HOM05D005128 ORTHO05D006227 2.8e-30 135.6 71 87.3
Cfa011089 Carpinus fangiana HOM05D005128 ORTHO05D006227 2.8e-30 135.6 71 88.7
ECA234G3101 Erigeron canadensis HOM05D005128 ORTHO05D006227 2.8e-30 135.6 71 87.3
Eucgr.L02413 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.8e-30 135.6 71 88.7
HanXRQChr05g0138471 Helianthus annuus HOM05D005128 ORTHO05D006227 2.8e-30 135.6 71 87.3
Migut.B01551 Erythranthe guttata HOM05D005128 ORTHO05D006227 3.7e-30 135.2 71 88.7
Aqoxy3G02773 Aquilegia oxysepala HOM05D005128 ORTHO05D006227 4.8e-30 134.8 71 85.9
CDE02G2422 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 4.8e-30 134.8 71 85.9
Lsat_1_v5_gn_4_46700 Lactuca sativa HOM05D005128 ORTHO05D006227 4.8e-30 134.8 71 87.3
Lj3g0015662 Lotus japonicus HOM05D005128 ORTHO05D006227 4.8e-30 134.8 71 88.7
PSO782G3280 Papaver somniferum HOM05D005128 ORTHO05D006227 4.8e-30 134.8 71 88.7
SGA_v2.0_scaffold153G36917 Striga asiatica HOM05D005128 ORTHO05D006227 4.8e-30 134.8 70 88.6
FAN06G2047 Fragaria x ananassa HOM05D005128 ORTHO05D006227 6.3e-30 134.4 71 87.3
MSTRG.20701 Avicennia marina HOM05D005128 ORTHO05D006227 8.2e-30 134.0 71 87.3
Eucgr.J01567 Eucalyptus grandis HOM05D005128 ORTHO05D006227 8.2e-30 134.0 68 91.2
CDE11G0478 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 1.4e-29 133.3 71 83.1
unitig_0.g1324 Utricularia gibba HOM05D005128 ORTHO05D006227 1.4e-29 133.3 99 68.7
Glyma.07G112500 Glycine max HOM05D005128 ORTHO05D006227 1.8e-29 132.9 71 85.9
Phvul.010G052100 Phaseolus vulgaris HOM05D005128 ORTHO05D006227 1.8e-29 132.9 71 85.9
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 1.8e-29 132.9 71 84.5
VMungo0331G0261 Vigna mungo HOM05D005128 ORTHO05D006227 1.8e-29 132.9 71 85.9
Lalb_Chr07g0195501 Lupinus albus HOM05D005128 ORTHO05D006227 4.1e-29 131.7 71 84.5
Lalb_Chr13g0304581 Lupinus albus HOM05D005128 ORTHO05D006227 4.1e-29 131.7 71 84.5
PSO063G1454 Papaver somniferum HOM05D005128 ORTHO05D006227 4.1e-29 131.7 71 87.3
TWI59G1443 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 4.1e-29 131.7 71 84.5
QL04p030930 Quercus lobata HOM05D005128 ORTHO05D006227 5.3e-29 131.3 70 87.1
Eucgr.E04335 Eucalyptus grandis HOM05D005128 ORTHO05D006227 6.9e-29 131.0 71 87.3
CARHR248040 Cardamine hirsuta HOM05D005128 ORTHO05D006227 1.2e-28 130.2 71 84.5
HanXRQChr16g0520301 Helianthus annuus HOM05D005128 ORTHO05D006227 1.2e-28 130.2 71 83.1
Medtr8g006725 Medicago truncatula HOM05D005128 ORTHO05D006227 1.2e-28 130.2 71 84.5
TPR.G33121 Trifolium pratense HOM05D005128 ORTHO05D006227 1.2e-28 130.2 71 84.5
Carub.0006s3721 Capsella rubella HOM05D005128 ORTHO05D006227 1.5e-28 129.8 71 83.1
AT4G01710 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 2.0e-28 129.4 71 83.1
AL6G53500 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 2.6e-28 129.0 71 81.7
Ca_14055_v3 Cicer arietinum L. HOM05D005128 ORTHO05D006227 2.6e-28 129.0 71 83.1
Psat0s118g0040 Pisum sativum HOM05D005128 ORTHO05D006227 2.6e-28 129.0 71 83.1
Hund11691 Selenicereus undatus HOM05D005128 ORTHO05D006227 2.6e-28 129.0 71 83.1
Medtr1g112900 Medicago truncatula HOM05D005128 ORTHO05D006227 3.4e-28 128.6 71 83.1
THA.LOC104814071 Tarenaya hassleriana HOM05D005128 ORTHO05D006227 3.4e-28 128.6 109 61.5
A06p32130 Brassica napus HOM05D005128 ORTHO05D006227 5.9e-28 127.9 71 81.7
BolC3t18340H Brassica oleracea HOM05D005128 ORTHO05D006227 5.9e-28 127.9 71 81.7
BraA06t26141Z Brassica rapa HOM05D005128 ORTHO05D006227 5.9e-28 127.9 71 81.7
CiPaw.14G021600 Carya illinoinensis HOM05D005128 ORTHO05D006227 5.9e-28 127.9 70 87.1
Glyma.03G114200 Glycine max HOM05D005128 ORTHO05D006227 5.9e-28 127.9 71 83.1
Thhalv10005116m.g Eutrema salsugineum HOM05D005128 ORTHO05D006227 7.7e-28 127.5 71 81.7
Nn1g00897 Nelumbo nucifera HOM05D005128 ORTHO05D006227 7.7e-28 127.5 71 83.1
Sp2g28380 Schrenkiella parvula HOM05D005128 ORTHO05D006227 1.0e-27 127.1 71 81.7
C03p60810 Brassica napus HOM05D005128 ORTHO05D006227 1.3e-27 126.7 71 80.3
Manes.05G053000 Manihot esculenta HOM05D005128 ORTHO05D006227 1.3e-27 126.7 66 87.9
AUR62023426 Chenopodium quinoa HOM05D005128 ORTHO05D006227 1.7e-27 126.3 71 80.3
Sc02g0003030 Simmondsia chinensis HOM05D005128 ORTHO05D006227 2.9e-27 125.6 71 80.3
Aa31LG5G70 Aethionema arabicum HOM05D005128 ORTHO05D006227 5.0e-27 124.8 71 80.3
Gohir.D11G020200 Gossypium hirsutum HOM05D005128 ORTHO05D006227 6.5e-27 124.4 71 78.9
AUR62013728 Chenopodium quinoa HOM05D005128 ORTHO05D006227 1.1e-26 123.6 71 77.5
Gohir.A13G167950 Gossypium hirsutum HOM05D005128 ORTHO05D006227 1.1e-26 123.6 71 77.5
EL10Ac1g00782 Beta vulgaris HOM05D005128 ORTHO05D006227 1.9e-26 122.9 71 77.5
Carub.0008s2615 Capsella rubella HOM05D005128 ORTHO05D006227 1.9e-26 122.9 109 58.7
SMO203G0150 Selaginella moellendorffii HOM05D005128 ORTHO05D006227 5.5e-26 121.3 71 74.6
Gorai.007G021500 Gossypium raimondii HOM05D005128 ORTHO05D006227 2.7e-25 119.0 71 73.2
AagrBONN_evm.TU.Sc2ySwM_369.249 Anthoceros agrestis HOM05D005128 ORTHO05D006227 3.6e-25 118.6 71 73.2
AT5G65274 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 4.7e-25 118.2 71 74.6
arahy.Tifrunner.gnm1.ann1.L9RWF4 Arachis hypogaea HOM05D005128 ORTHO05D006227 6.7e-24 114.4 103 58.3
Eucgr.E02797 Eucalyptus grandis HOM05D005128 ORTHO05D006227 6.7e-24 114.4 73 82.2
Mapoly0006s0266 Marchantia polymorpha HOM05D005128 ORTHO05D006227 6.7e-24 114.4 71 71.8
AagrBONN_evm.TU.Sc2ySwM_369.256 Anthoceros agrestis HOM05D005128 ORTHO05D006227 1.1e-23 113.6 70 75.7
PGSC0003DMG400026042 Solanum tuberosum HOM05D005128 ORTHO05D006227 1.5e-23 113.2 124 52.4
arahy.Tifrunner.gnm1.ann1.V0IP08 Arachis hypogaea HOM05D005128 ORTHO05D006227 2.0e-23 112.8 103 57.3
AL8G42840 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 4.8e-22 108.2 66 72.7
SEGI_29435 Sequoiadendron giganteum HOM05D005128 ORTHO05D006227 9.1e-21 104.0 65 70.8
Pp3c15_3940 Physcomitrium patens HOM05D005128 ORTHO05D006227 2.0e-20 102.8 71 64.8
MD07G1103100 Malus domestica HOM05D005128 ORTHO05D006227 3.4e-20 102.1 71 71.8
Ah.05g173200 Amaranthus hybridus HOM05D005128 ORTHO05D006227 1.9e-18 96.3 135 42.2
Lalb_Chr13g0304551 Lupinus albus HOM05D005128 ORTHO05D006227 6.1e-17 91.3 46 87.0
Haze_02808 Corylus avellana HOM05D005128 ORTHO05D006227 1.0e-16 90.5 72 66.7
TPR.G6927 Trifolium pratense HOM05D005128 ORTHO05D006922 1.1e-15 87.0 45 82.2
Sed0016493 Sechium edule HOM05D005128 ORTHO05D006227 2.8e-14 82.4 71 62.0
BcaC03g18322 Brassica carinata HOM05D005128 ORTHO05D006227 4.0e-08 62.0 42 71.4
Eucgr.E00550 Eucalyptus grandis HOM05D005128 ORTHO05D006227 7.5e-07 57.8 32 81.2


User provided reference genes

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