Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0104800 Salix brachista HOM05D005531 ORTHO05D006332 1.1e-122 443.4 223 100.0
Sabra13G0105100 Salix brachista HOM05D005531 ORTHO05D006332 1.1e-122 443.4 223 100.0
Sabra13G0104500 Salix brachista HOM05D005531 ORTHO05D006332 2.7e-118 428.7 223 96.9
Potri.013G125700 Populus trichocarpa HOM05D005531 ORTHO05D006332 2.7e-65 252.7 223 64.1
Thecc.04G166800 Theobroma cacao HOM05D005531 ORTHO05D006332 7.8e-49 198.0 221 51.1
Manes.04G036700 Manihot esculenta HOM05D005531 ORTHO05D006332 1.0e-48 197.6 223 52.0
COL.COLO4_07535 Corchorus olitorius HOM05D005531 ORTHO05D006332 2.5e-47 193.0 221 49.8
Cc01_g03590 Coffea canephora HOM05D005531 ORTHO05D006332 3.3e-47 192.6 222 48.6
MD04G1048800 Malus domestica HOM05D005531 ORTHO05D006332 5.6e-47 191.8 220 50.9
Gohir.A02G090900 Gossypium hirsutum HOM05D005531 ORTHO05D006332 1.2e-46 190.7 221 49.8
GSVIVG01038136001 Vitis vinifera HOM05D005531 ORTHO05D006332 2.8e-46 189.5 223 49.8
HanXRQChr14g0432131 Helianthus annuus HOM05D005531 ORTHO05D006332 8.1e-46 188.0 220 48.6
Gohir.D02G109600 Gossypium hirsutum HOM05D005531 ORTHO05D006332 1.1e-45 187.6 220 49.1
Gorai.005G123800 Gossypium raimondii HOM05D005531 ORTHO05D006332 1.1e-45 187.6 220 49.1
QL10p054586 Quercus lobata HOM05D005531 ORTHO05D006332 1.1e-45 187.6 222 50.0
QL93p1902_0778 Quercus lobata HOM05D005531 ORTHO05D006332 1.1e-45 187.6 222 50.0
Cfa015263 Carpinus fangiana HOM05D005531 ORTHO05D006332 1.4e-45 187.2 222 49.5
Migut.N03071 Erythranthe guttata HOM05D005531 ORTHO05D006332 1.4e-45 187.2 220 48.2
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-45 186.8 220 49.1
THA.LOC104817577 Tarenaya hassleriana HOM05D005531 ORTHO05D006332 2.3e-45 186.4 223 48.9
CAN.G87.3 Capsicum annuum HOM05D005531 ORTHO05D006332 3.1e-45 186.0 220 49.1
CiPaw.01G171100 Carya illinoinensis HOM05D005531 ORTHO05D006332 3.1e-45 186.0 220 50.0
Eucgr.A00006 Eucalyptus grandis HOM05D005531 ORTHO05D006332 3.1e-45 186.0 223 49.3
Oeu021570.1 Olea europaea HOM05D005531 ORTHO05D006332 3.1e-45 186.0 223 48.9
Cpa.g.sc9.358 Carica papaya HOM05D005531 ORTHO05D006332 1.2e-44 184.1 223 49.3
Actinidia12100 Actinidia chinensis HOM05D005531 ORTHO05D006332 1.5e-44 183.7 223 49.3
Dinv09088 Davidia involucrata HOM05D005531 ORTHO05D006332 1.5e-44 183.7 219 49.8
PGR042G0031 Punica granatum HOM05D005531 ORTHO05D006332 1.5e-44 183.7 223 48.9
Sed0016017 Sechium edule HOM05D005531 ORTHO05D006332 1.5e-44 183.7 222 48.2
TWI15G0620 Tripterygium wilfordii HOM05D005531 ORTHO05D006332 1.5e-44 183.7 219 50.2
Ciclev10021434m.g Citrus clementina HOM05D005531 ORTHO05D006332 2.0e-44 183.3 222 48.6
unitig_0.g2525 Utricularia gibba HOM05D005531 ORTHO05D006332 2.0e-44 183.3 221 47.5
Medtr4g087250 Medicago truncatula HOM05D005531 ORTHO05D006332 4.4e-44 182.2 223 47.1
TPR.G23541 Trifolium pratense HOM05D005531 ORTHO05D006332 4.4e-44 182.2 223 47.1
MBI08_g25563_MAGBIO Magnolia biondii HOM05D005531 ORTHO05D006332 5.8e-44 181.8 221 46.6
Oeu016608.2 Olea europaea HOM05D005531 ORTHO05D006332 5.8e-44 181.8 223 48.0
MELO3C033213.2 Cucumis melo HOM05D005531 ORTHO05D006332 7.6e-44 181.4 220 48.6
CsaV3_4G029900 Cucumis sativus L. HOM05D005531 ORTHO05D006332 7.6e-44 181.4 220 48.6
Aa31LG10G7090 Aethionema arabicum HOM05D005531 ORTHO05D006332 2.2e-43 179.9 221 46.2
MSTRG.22027 Avicennia marina HOM05D005531 ORTHO05D006332 2.2e-43 179.9 219 47.9
Phvul.003G296200 Phaseolus vulgaris HOM05D005531 ORTHO05D006332 2.2e-43 179.9 223 48.0
ECA238G0637 Erigeron canadensis HOM05D005531 ORTHO05D006332 3.8e-43 179.1 220 47.3
Nn7g37674 Nelumbo nucifera HOM05D005531 ORTHO05D006332 3.8e-43 179.1 219 46.1
Carub.0005s1837 Capsella rubella HOM05D005531 ORTHO05D006332 4.9e-43 178.7 221 46.2
SGA_v2.0_scaffold25G10999 Striga asiatica HOM05D005531 ORTHO05D006332 6.4e-43 178.3 223 48.0
SalBow6G4103 Salvia bowleyana HOM05D005531 ORTHO05D006332 8.4e-43 177.9 223 46.6
AT3G52050 Arabidopsis thaliana HOM05D005531 ORTHO05D006332 1.9e-42 176.8 221 45.7
Sp5g10250 Schrenkiella parvula HOM05D005531 ORTHO05D006332 1.9e-42 176.8 222 44.6
Ca_18643_v3 Cicer arietinum L. HOM05D005531 ORTHO05D006332 3.2e-42 176.0 223 46.6
FvH4_5g12060 Fragaria vesca HOM05D005531 ORTHO05D006332 3.2e-42 176.0 220 47.3
FAN04G0151 Fragaria x ananassa HOM05D005531 ORTHO05D006332 3.2e-42 176.0 220 47.3
FAN13G1713 Fragaria x ananassa HOM05D005531 ORTHO05D006332 3.2e-42 176.0 220 47.3
FAN18G3014 Fragaria x ananassa HOM05D005531 ORTHO05D006332 3.2e-42 176.0 220 47.3
FAN18G3485 Fragaria x ananassa HOM05D005531 ORTHO05D006332 3.2e-42 176.0 220 47.3
Lj4g0014314 Lotus japonicus HOM05D005531 ORTHO05D006332 4.1e-42 175.6 223 47.1
AL5G32590 Arabidopsis lyrata HOM05D005531 ORTHO05D006332 5.4e-42 175.3 221 45.2
Thhalv10010410m.g Eutrema salsugineum HOM05D005531 ORTHO05D006332 5.4e-42 175.3 221 45.2
Glyma.02G137000 Glycine max HOM05D005531 ORTHO05D006332 1.6e-41 173.7 223 46.6
Psat7g121280 Pisum sativum HOM05D005531 ORTHO05D006332 1.6e-41 173.7 223 45.3
Glyma.07G208400 Glycine max HOM05D005531 ORTHO05D006332 2.1e-41 173.3 223 47.1
HPP92_024926 Vanilla planifolia HOM05D005531 ORTHO05D006332 2.1e-41 173.3 222 43.7
PSO675G8407 Papaver somniferum HOM05D005531 ORTHO05D006332 2.7e-41 172.9 219 43.4
CANSAT54G2817 Cannabis sativa HOM05D005531 ORTHO05D006332 3.5e-41 172.6 220 45.0
BcaNung06967 Brassica carinata HOM05D005531 ORTHO05D006332 4.6e-41 172.2 222 42.8
Aqoxy1G02291 Aquilegia oxysepala HOM05D005531 ORTHO05D006332 6.0e-41 171.8 219 46.1
BcaB01g00451 Brassica carinata HOM05D005531 ORTHO05D006332 6.0e-41 171.8 222 42.8
C08p27300 Brassica napus HOM05D005531 ORTHO05D006332 6.0e-41 171.8 222 42.8
BolC8t50347H Brassica oleracea HOM05D005531 ORTHO05D006332 6.0e-41 171.8 222 42.8
PSO017G4245 Papaver somniferum HOM05D005531 ORTHO05D006332 6.0e-41 171.8 219 44.3
FAN08G1892 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.7e-40 170.2 220 46.4
RcHm_v2.0_Chr4g0406021 Rosa chinensis HOM05D005531 ORTHO05D006332 1.7e-40 170.2 220 46.4
A09p45110 Brassica napus HOM05D005531 ORTHO05D006332 3.0e-40 169.5 222 41.9
CDE07G1035 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 3.0e-40 169.5 221 41.6
Os03g0227300 Oryza sativa ssp. japonica HOM05D005531 ORTHO05D006332 5.1e-40 168.7 221 43.9
Zm00001eb399280 Zea mays HOM05D005531 ORTHO05D006332 5.1e-40 168.7 221 43.9
Lalb_Chr16g0384491 Lupinus albus HOM05D005531 ORTHO05D006332 6.6e-40 168.3 223 45.3
HPP92_024943 Vanilla planifolia HOM05D005531 ORTHO05D006332 8.6e-40 167.9 220 43.2
BraA09t39972Z Brassica rapa HOM05D005531 ORTHO05D006332 1.9e-39 166.8 222 41.4
arahy.Tifrunner.gnm1.ann1.6AY0JN Arachis hypogaea HOM05D005531 ORTHO05D006332 2.8e-38 162.9 223 43.5
arahy.Tifrunner.gnm1.ann1.77ZG52 Arachis hypogaea HOM05D005531 ORTHO05D006332 2.8e-38 162.9 223 43.5
Rhsim02G0083700 Rhododendron simsii HOM05D005531 ORTHO05D006332 3.6e-38 162.5 220 44.5
DCAR_028442 Daucus carota HOM05D005531 ORTHO05D006332 1.2e-36 157.5 223 44.4
AUR62023806 Chenopodium quinoa HOM05D005531 ORTHO05D006332 2.6e-36 156.4 223 42.2
ATR0743G039 Amborella trichopoda HOM05D005531 ORTHO05D006332 1.3e-35 154.1 216 42.6
AUR62002375 Chenopodium quinoa HOM05D005531 ORTHO05D006332 1.7e-35 153.7 223 41.3
PSO675G6185 Papaver somniferum HOM05D005531 ORTHO05D006332 4.9e-35 152.1 217 41.0
SEGI_01886 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 4.2e-34 149.1 217 41.0
PSO017G5810 Papaver somniferum HOM05D005531 ORTHO05D006332 2.7e-33 146.4 217 40.1
CSS0024284 Camellia sinensis var. sinensis HOM05D005531 ORTHO05D006332 6.0e-33 145.2 220 42.3
SEGI_24465 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 1.0e-32 144.4 217 40.6
Lsat_1_v5_gn_2_38340 Lactuca sativa HOM05D005531 ORTHO05D006332 8.7e-32 141.4 220 41.4
TAR362G0104 Trochodendron aralioides HOM05D005531 ORTHO05D006332 1.6e-30 137.1 205 42.9
Prupe.1G206500 Prunus persica HOM05D005531 ORTHO05D006332 4.8e-30 135.6 219 41.1
EL10Ac3g06068 Beta vulgaris HOM05D005531 ORTHO05D006332 8.1e-30 134.8 204 41.2
Atru.chr4.1396 Acer truncatum HOM05D005531 ORTHO05D006332 1.4e-26 124.0 222 37.8
ClCG04G002840 Citrullus lanatus HOM05D005531 ORTHO05D006332 1.9e-26 123.6 190 41.6
Hund12388 Selenicereus undatus HOM05D005531 ORTHO05D006332 3.2e-26 122.9 223 38.1
AagrBONN_evm.TU.Sc2ySwM_228.1809 Anthoceros agrestis HOM05D005531 ORTHO05D006332 2.0e-20 103.6 219 31.5
SMO232G0046 Selaginella moellendorffii HOM05D005531 ORTHO05D006332 2.6e-20 103.2 241 29.5
AagrBONN_evm.TU.Sc2ySwM_228.5815 Anthoceros agrestis HOM05D005531 ORTHO05D006332 7.6e-20 101.7 220 31.8
Pp3c16_17520 Physcomitrium patens HOM05D005531 ORTHO05D006332 1.3e-19 100.9 217 27.2
Peaxi162Scf00568g00523 Petunia axillaris HOM05D005531 ORTHO05D006332 2.2e-19 100.1 169 38.5
Nitab4.5_0005427g0010 Nicotiana tabacum HOM05D005531 ORTHO05D006332 5.5e-18 95.5 185 37.8
Duzib151G0770 Durio zibethinus HOM05D005531 ORTHO05D006332 3.5e-17 92.8 65 72.3
Mapoly0001s0155 Marchantia polymorpha HOM05D005531 ORTHO05D006332 3.5e-17 92.8 125 42.4
Nitab4.5_0014896g0010 Nicotiana tabacum HOM05D005531 ORTHO05D006332 3.0e-16 89.7 62 71.0
QL10p054560 Quercus lobata HOM05D005531 ORTHO05D006332 3.9e-16 89.4 64 70.3
MD17G1177500 Malus domestica HOM05D005531 ORTHO05D006332 1.3e-14 84.3 49 77.6
MELO3C033507.2 Cucumis melo HOM05D005531 ORTHO05D006332 2.6e-12 76.6 53 71.7
SalBow1G7787 Salvia bowleyana HOM05D005531 ORTHO05D006332 3.4e-12 76.3 60 61.7
CDE07G1763 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 5.8e-12 75.5 63 52.4
MCO14G121 Micromonas commoda HOM05D005531 ORTHO05D006332 1.4e-10 70.9 73 41.1
Haze_01370 Corylus avellana HOM05D005531 ORTHO05D006332 5.5e-10 68.9 36 86.1
CBR_g41469 Chara braunii HOM05D000019 ORTHO05D009492 9.3e-10 68.2 79 40.5
VMungo0251G0056 Vigna mungo HOM05D005531 ORTHO05D006332 6.0e-09 65.5 36 77.8


User provided reference genes

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