Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0033400 Salix brachista HOM05D049348 ORTHO05D036645 1.0e-120 436.8 223 100.0
Potri.013G034600 Populus trichocarpa HOM05D049348 ORTHO05D036645 3.3e-55 219.2 154 74.0
Manes.12G119300 Manihot esculenta HOM05D000203 ORTHO05D036645 4.3e-15 85.9 127 38.6
Duzib147G1623 Durio zibethinus HOM05D000203 ORTHO05D000135 5.3e-13 79.0 161 35.4
Nn8g40832 Nelumbo nucifera HOM05D000203 ORTHO05D000135 1.5e-12 77.4 153 34.6
Dinv12564 Davidia involucrata HOM05D000203 ORTHO05D000135 4.9e-11 72.4 161 33.5
Thecc.01G079900 Theobroma cacao HOM05D000203 ORTHO05D000135 6.5e-11 72.0 159 33.3
Ciclev10027154m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.1e-10 71.2 129 34.9
CSS0049268 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 7.1e-10 68.6 149 32.9
CSS0008388 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 9.3e-10 68.2 140 32.9
Cc02_g20220 Coffea canephora HOM05D000203 ORTHO05D000135 1.2e-09 67.8 137 33.6
TWI36G0397 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.6e-09 67.4 123 35.8
Potri.009G084200 Populus trichocarpa HOM05D000203 ORTHO05D000135 2.1e-09 67.0 136 30.9
CSS0044339 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 2.7e-09 66.6 140 32.1
Ciclev10030387m.g Citrus clementina HOM05D000203 ORTHO05D000135 2.7e-09 66.6 138 31.9
Lj9C337T6 Lonicera japonica HOM05D000203 ORTHO05D000135 3.5e-09 66.2 151 34.4
Hma1.2p1_1051F.1_g252260 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 4.6e-09 65.9 116 35.3
Duzib192G0997 Durio zibethinus HOM05D000203 ORTHO05D000135 7.9e-09 65.1 120 34.2
CSS0043673 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.0e-08 64.7 121 33.1
Cfa000969 Carpinus fangiana HOM05D000203 ORTHO05D000135 1.0e-08 64.7 107 35.5
MELO3C018030.2 Cucumis melo HOM05D000203 ORTHO05D000135 1.0e-08 64.7 128 31.2
CsaV3_4G000010 Cucumis sativus L. HOM05D000203 ORTHO05D000135 1.0e-08 64.7 128 31.2
Oeu017584.1 Olea europaea HOM05D000203 ORTHO05D000135 1.8e-08 63.9 122 32.0
TAR285G0001 Trochodendron aralioides HOM05D000203 ORTHO05D000135 1.8e-08 63.9 137 29.2
CiPaw.07G040000 Carya illinoinensis HOM05D000203 ORTHO05D000135 5.1e-08 62.4 128 33.6
QL11p028776 Quercus lobata HOM05D000203 ORTHO05D000135 5.1e-08 62.4 123 33.3
TWI75G1001 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 5.1e-08 62.4 124 33.1
TAR285G0004 Trochodendron aralioides HOM05D000203 ORTHO05D000135 5.1e-08 62.4 154 28.6
GSVIVG01037031001 Vitis vinifera HOM05D000203 ORTHO05D000135 5.1e-08 62.4 143 30.1
CSS0006714 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 6.7e-08 62.0 146 30.1
ClCG10G009960 Citrullus lanatus HOM05D000203 ORTHO05D000135 6.7e-08 62.0 122 29.5
Ciclev10013802m.g Citrus clementina HOM05D000203 ORTHO05D000135 6.7e-08 62.0 124 32.3
Oeu017586.1 Olea europaea HOM05D000203 ORTHO05D000135 6.7e-08 62.0 122 31.1
Ciclev10030142m.g Citrus clementina HOM05D000203 ORTHO05D000135 8.7e-08 61.6 165 32.1
Prupe.8G152000 Prunus persica HOM05D000203 ORTHO05D000135 8.7e-08 61.6 105 33.3
TAR628G1329 Trochodendron aralioides HOM05D000894 ORTHO05D001833 1.1e-07 61.2 129 30.2
DCAR_022542 Daucus carota HOM05D000203 ORTHO05D000135 1.5e-07 60.8 95 37.9
Sabra09G0064900 Salix brachista HOM05D000203 ORTHO05D000135 1.5e-07 60.8 137 30.7
THA.LOC104826501 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 2.5e-07 60.1 156 30.8
PGR142G0376 Punica granatum HOM05D000203 ORTHO05D000135 3.3e-07 59.7 151 31.1
Actinidia00343 Actinidia chinensis HOM05D001079 ORTHO05D000135 4.3e-07 59.3 115 34.8
GSVIVG01037022001 Vitis vinifera HOM05D000203 ORTHO05D000135 4.3e-07 59.3 90 37.8
HanXRQChr14g0456481 Helianthus annuus HOM05D000203 ORTHO05D000135 5.7e-07 58.9 138 31.2
ECA238G3159 Erigeron canadensis HOM05D000203 ORTHO05D000135 7.4e-07 58.5 91 38.5
Lsat_1_v5_gn_5_144220 Lactuca sativa HOM05D000203 ORTHO05D000135 7.4e-07 58.5 108 37.0
Sed0009196 Sechium edule HOM05D000203 ORTHO05D000135 7.4e-07 58.5 122 29.5
Oeu025302.1 Olea europaea HOM05D000203 ORTHO05D000135 9.6e-07 58.2 137 29.2
Atru.chr6.1457 Acer truncatum HOM05D000203 ORTHO05D000135 1.3e-06 57.8 156 30.8
Solyc01g106720.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.3e-06 57.8 136 31.6
Sopen01g049040 Solanum pennellii HOM05D000203 ORTHO05D000135 1.3e-06 57.8 136 31.6
PGSC0003DMG400005131 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.3e-06 57.8 136 31.6
Ah.01g008470 Amaranthus hybridus HOM05D000203 ORTHO05D000135 1.6e-06 57.4 73 41.1
CAN.G504.4 Capsicum annuum HOM05D000203 ORTHO05D000135 1.6e-06 57.4 142 30.3
Cfa000970 Carpinus fangiana HOM05D000203 ORTHO05D000135 1.6e-06 57.4 96 43.8
Cfa006799 Carpinus fangiana HOM05D000203 ORTHO05D000135 1.6e-06 57.4 105 38.1
Cfa006800 Carpinus fangiana HOM05D000203 ORTHO05D000135 1.6e-06 57.4 105 38.1
PSO675G7023 Papaver somniferum HOM05D000203 ORTHO05D000135 1.6e-06 57.4 92 35.9
QL11p028631 Quercus lobata HOM05D000203 ORTHO05D000135 1.6e-06 57.4 116 33.6
Thecc.06G153500 Theobroma cacao HOM05D000203 ORTHO05D000135 1.6e-06 57.4 119 30.3
Haze_05553 Corylus avellana HOM05D030497 ORTHO05D029146 2.1e-06 57.0 76 40.8
PSO675G2437 Papaver somniferum HOM05D000203 ORTHO05D000135 2.1e-06 57.0 92 33.7
CSS0011968 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 2.8e-06 56.6 130 34.6
Lsat_1_v5_gn_2_111821 Lactuca sativa HOM05D000203 ORTHO05D000135 2.8e-06 56.6 102 37.3
Nitab4.5_0004004g0010 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.8e-06 56.6 118 35.6
Duzib168G0189 Durio zibethinus HOM05D000203 ORTHO05D000135 3.7e-06 56.2 83 41.0
GSVIVG01037024001 Vitis vinifera HOM05D000203 ORTHO05D000135 3.7e-06 56.2 137 27.7
CiPaw.07G039800 Carya illinoinensis HOM05D000203 ORTHO05D000135 4.8e-06 55.8 104 36.5
QL11p028754 Quercus lobata HOM05D000203 ORTHO05D000135 4.8e-06 55.8 116 32.8
Sed0007340 Sechium edule HOM05D000203 ORTHO05D000135 4.8e-06 55.8 140 29.3
TAR628G0844 Trochodendron aralioides HOM05D000203 ORTHO05D000135 4.8e-06 55.8 152 28.9
CSS0014520 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 6.3e-06 55.5 127 29.9
Cpa.g.sc505.6 Carica papaya HOM05D000203 ORTHO05D000135 6.3e-06 55.5 122 29.5
Nitab4.5_0004004g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 6.3e-06 55.5 147 29.9
PGR042G3915 Punica granatum HOM05D000203 ORTHO05D000135 6.3e-06 55.5 120 29.2
Actinidia16821 Actinidia chinensis HOM05D000203 ORTHO05D000135 8.2e-06 55.1 127 31.5
QL11p028766 Quercus lobata HOM05D000203 ORTHO05D000135 8.2e-06 55.1 93 36.6


User provided reference genes

Program Settings