Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.0e-260 902.9 468 100.0
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 6.7e-244 847.0 467 93.6
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 2.5e-190 669.1 468 79.1
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 4.9e-162 575.1 461 66.2
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 4.5e-147 525.4 465 60.4
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.2e-144 517.3 465 58.7
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 2.7e-144 516.2 466 60.1
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 8.7e-143 511.1 465 58.1
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.5e-142 509.6 467 57.8
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 7.4e-142 508.1 467 59.3
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 5.0e-138 495.4 459 59.7
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 7.9e-136 488.0 458 57.2
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.5e-134 483.8 463 56.4
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.1e-132 477.6 462 56.5
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.2e-131 474.2 457 54.0
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 2.0e-131 473.4 457 54.3
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 5.9e-131 471.9 465 55.7
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 7.7e-131 471.5 470 54.7
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 3.8e-130 469.2 457 56.5
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 5.0e-130 468.8 458 55.5
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.9e-129 466.8 473 55.0
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 4.2e-129 465.7 409 59.9
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 6.1e-128 461.8 462 55.2
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.0e-127 461.1 470 54.9
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 4.1e-124 449.1 463 52.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 9.1e-124 448.0 463 52.5
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.1e-121 441.0 457 54.9
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.2e-121 439.5 468 52.6
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.6e-120 437.2 447 54.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.3e-119 433.3 459 53.4
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 3.0e-119 433.0 464 51.3
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 7.4e-118 428.3 470 51.3
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.3e-117 427.6 449 54.3
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 6.3e-117 425.2 475 51.8
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 3.1e-116 422.9 468 51.5
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 4.1e-116 422.5 460 50.7
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 7.0e-116 421.8 436 52.3
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.2e-115 421.0 466 50.0
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 7.7e-115 418.3 459 51.9
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 7.7e-115 418.3 484 49.4
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 3.8e-114 416.0 476 49.2
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 3.8e-114 416.0 484 49.4
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 8.5e-114 414.8 467 50.7
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 2.5e-113 413.3 472 50.2
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.1e-112 410.2 468 49.6
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 2.7e-112 409.8 471 52.2
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.4e-111 407.5 468 49.4
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 1.4e-111 407.5 447 50.6
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-111 407.1 465 48.4
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.2e-110 404.4 471 49.5
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.2e-110 404.4 463 49.5
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 3.4e-110 402.9 457 48.8
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 5.7e-110 402.1 471 47.8
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 7.5e-110 401.7 409 51.8
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.3e-109 401.0 465 48.2
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 8.3e-109 398.3 465 49.0
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 1.1e-108 397.9 467 48.0
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 7.0e-108 395.2 471 49.7
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.0e-107 393.7 463 49.2
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 2.7e-107 393.3 460 48.7
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 3.5e-107 392.9 468 47.6
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 5.0e-106 389.0 441 50.3
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 5.0e-106 389.0 460 48.0
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 8.5e-106 388.3 462 47.6
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.5e-105 387.5 475 48.8
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.9e-105 387.1 431 50.1
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.5e-105 386.7 467 46.7
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 5.5e-105 385.6 465 47.7
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 1.8e-103 380.6 442 49.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 5.2e-103 379.0 459 47.3
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 2.6e-102 376.7 461 46.6
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 4.4e-102 375.9 340 55.6
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.7e-101 374.0 460 47.0
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 2.2e-101 373.6 461 46.2
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 3.7e-101 372.9 461 46.2
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.1e-100 371.3 448 48.2
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 2.4e-100 370.2 464 47.0
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 7.0e-100 368.6 468 48.3
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 9.1e-100 368.2 463 45.6
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.2e-99 367.9 463 45.8
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.0e-99 367.1 475 47.2
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 3.5e-99 366.3 461 45.8
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 5.9e-99 365.5 462 46.3
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 5.5e-97 359.0 339 56.9
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.6e-96 357.5 334 56.0
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 8.0e-96 355.1 438 46.1
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.8e-95 354.0 488 43.4
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.6e-91 340.9 425 45.6
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.0e-90 338.2 451 45.5
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 5.6e-89 332.4 456 43.6
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 9.5e-89 331.6 300 58.7
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.6e-88 330.9 454 41.6
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 5.4e-84 315.8 469 42.4
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 4.6e-83 312.8 302 54.6
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.2e-80 304.7 330 50.9
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 7.3e-65 252.3 459 37.5
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 4.4e-62 243.0 465 36.3
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 5.3e-55 219.5 323 40.6
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 9.0e-55 218.8 372 39.0
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 2.1e-48 197.6 200 50.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 6.2e-40 169.5 220 46.8
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 7.1e-36 156.0 158 51.3
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.8e-32 143.3 133 56.4
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 4.8e-32 143.3 314 33.1
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.1e-31 140.2 133 55.6
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.1e-31 140.2 133 55.6
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 6.1e-27 126.3 483 27.7
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 7.9e-27 125.9 119 56.3
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 9.0e-23 112.5 129 50.4
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 9.0e-23 112.5 134 44.8
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.6e-19 101.7 162 30.2
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.6e-19 101.7 162 30.2
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.6e-19 100.5 257 30.0
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 2.8e-16 90.9 78 55.1
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 5.3e-15 86.7 80 63.8
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 5.9e-14 83.2 418 25.1
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 8.5e-13 79.3 466 23.4
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.4e-12 78.6 116 42.2
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 3.6e-11 73.9 55 58.2
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.8e-10 71.6 113 38.9
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 1.4e-07 62.0 36 77.8
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 4.5e-06 57.0 67 50.7


User provided reference genes

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