Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 5.4e-112 407.9 241 100.0
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 4.6e-87 325.1 232 86.6
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 2.7e-31 139.8 146 50.0
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 2.0e-29 133.7 250 37.2
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 7.4e-29 131.7 240 46.2
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 6.9e-27 125.2 133 43.6
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 9.1e-27 124.8 82 62.2
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 1.5e-26 124.0 82 61.0
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 2.6e-26 123.2 82 59.8
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.4e-26 122.9 82 59.8
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 3.4e-26 122.9 82 59.8
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 4.5e-26 122.5 126 47.6
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 4.5e-26 122.5 82 58.5
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 5.9e-26 122.1 127 48.8
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 1.3e-25 120.9 125 49.6
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.3e-25 120.9 95 54.7
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.7e-25 120.6 83 54.2
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 1.7e-25 120.6 106 52.8
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 1.7e-25 120.6 82 56.1
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.7e-25 120.6 128 47.7
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 2.2e-25 120.2 82 58.5
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 2.2e-25 120.2 82 58.5
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 2.9e-25 119.8 115 48.7
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 2.9e-25 119.8 98 52.0
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 3.8e-25 119.4 82 56.1
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 3.8e-25 119.4 128 46.1
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 3.8e-25 119.4 80 58.8
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 5.0e-25 119.0 129 45.7
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 6.5e-25 118.6 82 58.5
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 6.5e-25 118.6 82 56.1
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 1.1e-24 117.9 128 45.3
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.1e-24 117.9 128 46.9
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 1.4e-24 117.5 134 44.8
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 1.4e-24 117.5 101 47.5
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 1.4e-24 117.5 119 49.6
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 1.9e-24 117.1 151 43.7
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 1.9e-24 117.1 98 51.0
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 2.5e-24 116.7 128 44.5
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 2.5e-24 116.7 82 59.8
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.5e-24 116.7 83 56.6
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 2.5e-24 116.7 98 50.0
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 2.5e-24 116.7 82 56.1
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 2.5e-24 116.7 119 48.7
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 3.2e-24 116.3 116 41.4
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 3.2e-24 116.3 83 55.4
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 3.2e-24 116.3 104 52.9
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 4.2e-24 115.9 120 48.3
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.2e-24 115.9 83 55.4
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.2e-24 115.9 83 55.4
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 4.2e-24 115.9 120 43.3
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 5.5e-24 115.5 82 57.3
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.5e-24 115.5 79 60.8
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 5.5e-24 115.5 82 57.3
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 5.5e-24 115.5 132 47.0
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 7.2e-24 115.2 128 43.0
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 7.2e-24 115.2 101 50.5
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 7.2e-24 115.2 129 44.2
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 7.2e-24 115.2 82 57.3
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 9.4e-24 114.8 103 50.5
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 9.4e-24 114.8 120 45.8
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 9.4e-24 114.8 80 53.8
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.2e-23 114.4 83 54.2
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 2.1e-23 113.6 127 45.7
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 2.1e-23 113.6 151 42.4
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 2.7e-23 113.2 121 45.5
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 3.6e-23 112.8 96 47.9
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 3.6e-23 112.8 103 46.6
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 4.7e-23 112.5 139 39.6
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 6.1e-23 112.1 137 43.8
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 6.1e-23 112.1 81 56.8
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 7.9e-23 111.7 127 44.9
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 7.9e-23 111.7 102 50.0
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.0e-22 111.3 80 56.2
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.4e-22 110.9 115 43.5
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 1.4e-22 110.9 127 51.2
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 1.4e-22 110.9 130 40.8
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 1.8e-22 110.5 139 41.7
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 2.3e-22 110.2 103 45.6
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 3.0e-22 109.8 82 56.1
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 3.9e-22 109.4 116 46.6
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 6.7e-22 108.6 103 44.7
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 8.8e-22 108.2 129 43.4
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 8.8e-22 108.2 123 44.7
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 8.8e-22 108.2 105 45.7
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 8.8e-22 108.2 129 41.9
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.1e-21 107.8 125 41.6
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 1.1e-21 107.8 81 51.9
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 3.3e-21 106.3 140 42.9
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 4.4e-21 105.9 99 47.5
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 2.8e-20 103.2 138 39.1
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 8.2e-20 101.7 136 40.4
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 8.2e-20 101.7 176 35.2
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 7.0e-19 98.6 119 42.0
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 7.0e-19 98.6 188 34.0
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 5.9e-18 95.5 76 50.0
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 7.7e-18 95.1 68 55.9
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.0e-17 94.7 66 59.1
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 5.0e-17 92.4 128 39.1
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 4.2e-16 89.4 102 44.1
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 1.6e-15 87.4 68 54.4
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 3.6e-15 86.3 74 50.0
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 3.6e-15 86.3 72 47.2
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 3.6e-15 86.3 75 45.3
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 3.6e-15 86.3 69 52.2
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 6.1e-15 85.5 60 60.0
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 6.1e-15 85.5 59 61.0
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 1.4e-14 84.3 140 35.0
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 6.7e-14 82.0 107 39.3
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 2.0e-13 80.5 65 52.3
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.0e-13 80.5 119 39.5
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 3.3e-13 79.7 118 39.8
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 1.7e-12 77.4 78 42.3
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 2.2e-12 77.0 70 45.7
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-11 74.7 104 35.6
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-11 74.7 104 35.6
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 1.4e-11 74.3 94 40.4
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 1.8e-11 73.9 63 50.8
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 5.3e-11 72.4 59 52.5
ECA232G2196 Erigeron canadensis HOM05D004644 ORTHO05D005700 7.0e-11 72.0 59 50.8
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.5e-10 69.7 100 32.0
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 1.3e-09 67.8 81 40.7
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 7.2e-08 62.0 77 37.7
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 9.4e-08 61.6 44 52.3
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 8.0e-07 58.5 140 24.3
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 1.0e-06 58.2 146 32.2


User provided reference genes

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