Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 6.9e-119 431.0 282 100.0
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 1.6e-115 419.9 282 98.2
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 2.0e-113 412.9 282 97.2
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 5.0e-69 265.4 205 87.3
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 1.1e-52 211.1 197 73.6
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 1.5e-36 157.5 197 55.8
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 7.3e-36 155.2 158 60.8
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 2.1e-35 153.7 211 56.9
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 2.1e-35 153.7 197 64.5
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 1.8e-34 150.6 193 57.0
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 2.4e-34 150.2 207 50.7
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 5.3e-34 149.1 271 46.5
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 3.4e-33 146.4 281 42.0
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 9.9e-33 144.8 201 50.2
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 2.2e-32 143.7 234 52.6
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 2.9e-32 143.3 196 61.7
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 3.8e-32 142.9 270 42.6
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 4.9e-32 142.5 270 43.7
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 8.4e-32 141.7 99 78.8
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 1.1e-31 141.4 197 67.5
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 1.9e-31 140.6 196 59.2
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 1.9e-31 140.6 207 54.6
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 1.9e-31 140.6 232 52.6
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 3.2e-31 139.8 204 57.4
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 3.2e-31 139.8 204 57.4
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 9.3e-31 138.3 204 53.4
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 1.6e-30 137.5 99 78.8
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 2.1e-30 137.1 99 76.8
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 4.6e-30 136.0 156 65.4
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 4.6e-30 136.0 170 62.4
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 6.0e-30 135.6 285 42.8
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 7.9e-30 135.2 199 59.3
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 7.9e-30 135.2 201 50.2
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 7.9e-30 135.2 192 50.5
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 1.3e-29 134.4 176 61.4
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 1.7e-29 134.0 99 72.7
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 2.3e-29 133.7 128 67.2
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 2.3e-29 133.7 170 61.8
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 3.0e-29 133.3 154 58.4
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 3.0e-29 133.3 205 54.1
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 5.1e-29 132.5 197 48.7
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 5.1e-29 132.5 175 50.3
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 6.6e-29 132.1 194 54.1
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 6.6e-29 132.1 99 71.7
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 8.7e-29 131.7 198 56.1
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 1.5e-28 131.0 128 60.2
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 1.5e-28 131.0 206 54.4
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 1.9e-28 130.6 259 46.3
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 4.3e-28 129.4 146 57.5
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 5.6e-28 129.0 211 48.3
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 9.6e-28 128.3 147 57.8
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 1.6e-27 127.5 100 74.0
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 1.6e-27 127.5 167 51.5
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 2.1e-27 127.1 160 54.4
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 6.2e-27 125.6 152 52.6
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 1.8e-26 124.0 196 55.6
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 1.8e-26 124.0 82 80.5
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 2.4e-26 123.6 257 42.4
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 3.1e-26 123.2 98 72.4
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 3.1e-26 123.2 282 44.7
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 5.3e-26 122.5 161 51.6
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 6.9e-26 122.1 229 42.4
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 6.9e-26 122.1 184 49.5
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 2.0e-25 120.6 197 46.2
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 2.6e-25 120.2 165 60.6
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 2.6e-25 120.2 196 54.1
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 3.4e-25 119.8 155 51.6
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 4.5e-25 119.4 197 51.3
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 5.8e-25 119.0 231 47.2
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 5.8e-25 119.0 215 50.2
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 9.9e-25 118.2 173 46.2
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 2.9e-24 116.7 144 54.2
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 3.8e-24 116.3 205 52.2
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 4.9e-24 115.9 184 46.7
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 1.4e-23 114.4 271 41.7
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.9e-23 114.0 275 43.3
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 1.9e-23 114.0 161 51.6
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 2.4e-23 113.6 156 50.0
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 2.4e-23 113.6 156 50.0
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 3.2e-23 113.2 280 42.9
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 3.2e-23 113.2 161 51.6
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 5.5e-23 112.5 83 72.3
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 7.1e-23 112.1 154 61.0
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 1.2e-22 111.3 212 41.5
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 1.2e-22 111.3 187 46.5
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 2.1e-22 110.5 139 54.0
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 7.9e-22 108.6 146 50.0
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 1.8e-21 107.5 160 48.8
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.8e-21 107.5 160 48.8
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.8e-21 107.5 160 48.8
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 3.0e-21 106.7 152 48.7
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 8.7e-21 105.1 82 68.3
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 1.1e-20 104.8 167 44.9
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 1.5e-20 104.4 134 56.0
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.9e-20 104.0 233 47.6
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 2.1e-19 100.5 66 75.8
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 3.7e-19 99.8 71 71.8
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 6.2e-19 99.0 154 49.4
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 8.1e-19 98.6 283 35.7
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 1.1e-18 98.2 159 45.9
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 1.1e-18 98.2 159 54.7
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 1.4e-18 97.8 163 47.2
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 1.8e-18 97.4 144 47.9
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 3.1e-18 96.7 170 53.5
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 4.0e-18 96.3 163 46.6
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 4.0e-18 96.3 163 46.6
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 5.3e-18 95.9 145 47.6
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 5.3e-18 95.9 145 47.6
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 6.9e-18 95.5 154 47.4
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 6.9e-18 95.5 154 47.4
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 1.2e-17 94.7 208 39.4
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 1.2e-17 94.7 208 39.4
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 7.6e-17 92.0 235 40.9
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 3.8e-16 89.7 60 71.7
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 2.5e-15 87.0 86 53.5
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 4.6e-14 82.8 153 41.8
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 2.3e-13 80.5 201 41.3
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 9.6e-12 75.1 207 34.8
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 1.1e-10 71.6 182 34.6
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 5.0e-08 62.8 147 36.7
Sabra16G0103300 Salix brachista HOM05D000012 ORTHO05D002345 3.2e-07 60.1 73 49.3


User provided reference genes

Program Settings