Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 1.9e-267 925.2 459 100.0
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.7e-231 805.8 454 90.1
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 5.3e-185 651.4 458 71.0
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 7.9e-173 610.9 455 69.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 4.4e-171 605.1 457 68.7
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 4.8e-170 601.7 440 68.9
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.2e-168 597.0 466 65.2
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 5.9e-168 594.7 459 66.0
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 3.8e-167 592.0 463 65.4
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 5.0e-167 591.7 453 65.8
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 8.5e-167 590.9 456 65.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 4.2e-166 588.6 456 66.7
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 5.5e-166 588.2 456 65.4
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 6.7e-164 581.3 454 65.4
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 2.8e-162 575.9 467 63.6
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 4.8e-162 575.1 474 64.1
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 4.8e-162 575.1 463 63.5
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 4.8e-162 575.1 460 64.1
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 8.2e-162 574.3 446 65.7
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 8.2e-162 574.3 435 65.7
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 3.1e-161 572.4 466 63.3
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 9.1e-161 570.9 455 64.6
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 9.1e-161 570.9 454 64.5
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 1.2e-160 570.5 450 65.1
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 1.6e-160 570.1 454 64.1
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 7.7e-160 567.8 457 63.9
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 1.0e-159 567.4 454 64.3
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.3e-159 567.0 471 63.9
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 2.9e-159 565.8 454 63.2
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 2.9e-159 565.8 457 63.9
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 5.0e-159 565.1 459 62.3
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 1.1e-158 563.9 469 63.1
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.5e-158 563.5 460 63.5
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 9.4e-158 560.8 457 63.0
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 9.4e-158 560.8 455 62.2
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.2e-157 560.5 472 62.5
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 6.1e-157 558.1 455 62.2
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.8e-156 556.6 465 61.1
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.2e-156 555.1 454 62.6
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 8.8e-156 554.3 454 61.5
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 5.7e-155 551.6 453 61.6
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 6.3e-154 548.1 453 61.4
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.4e-153 547.0 476 59.0
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 2.4e-153 546.2 451 61.6
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 2.4e-153 546.2 475 59.2
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 4.1e-153 545.4 451 61.4
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 4.1e-153 545.4 452 61.3
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 4.1e-153 545.4 500 57.4
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 7.0e-153 544.7 456 60.1
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 7.0e-153 544.7 451 61.4
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 7.0e-153 544.7 477 58.3
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 3.5e-152 542.3 451 62.1
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 4.5e-152 542.0 451 61.6
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.3e-151 540.4 465 60.4
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 1.3e-151 540.4 437 62.7
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.1e-150 537.3 486 58.6
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.1e-149 533.1 473 57.7
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 2.1e-149 533.1 459 58.8
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 2.8e-149 532.7 443 61.2
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 3.6e-149 532.3 462 59.3
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 4.7e-149 531.9 458 59.8
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.8e-148 530.0 429 61.8
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 2.3e-148 529.6 458 60.5
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.0e-148 529.3 455 58.7
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 4.0e-148 528.9 473 58.8
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.2e-148 528.5 456 59.2
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 6.8e-148 528.1 451 60.8
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 8.8e-148 527.7 471 59.4
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 4.4e-147 525.4 448 60.7
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 1.7e-146 523.5 393 67.4
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 3.7e-146 522.3 470 58.7
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 6.3e-146 521.5 560 51.8
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 7.0e-145 518.1 497 54.3
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 5.0e-143 511.9 474 57.6
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 8.6e-143 511.1 459 57.3
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.5e-142 509.6 465 56.1
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 7.3e-142 508.1 441 58.0
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 9.5e-142 507.7 388 64.9
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 6.1e-141 505.0 451 58.5
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 2.3e-140 503.1 368 67.9
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 1.7e-138 496.9 514 53.1
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.2e-136 490.7 450 56.2
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 1.2e-136 490.7 451 57.2
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 4.6e-136 488.8 463 55.9
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 8.0e-133 478.0 429 56.6
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.1e-132 476.1 326 71.8
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 4.4e-131 472.2 439 54.4
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 1.3e-130 470.7 375 62.9
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.7e-130 470.3 484 52.9
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 3.5e-128 462.6 463 55.1
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 7.5e-123 444.9 360 63.1
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 4.9e-122 442.2 438 52.7
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.2e-115 421.0 450 52.4
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.2e-115 421.0 320 63.8
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 2.9e-114 416.4 458 51.7
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 1.7e-106 390.6 347 59.1
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 1.7e-106 390.6 347 59.1
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.7e-106 390.6 396 50.5
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 7.8e-104 381.7 339 58.7
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 3.8e-98 362.8 483 41.0
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 1.6e-96 357.5 460 43.9
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 7.4e-94 348.6 292 60.3
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 9.6e-94 348.2 258 66.3
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.4e-84 317.0 230 67.8
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 2.0e-83 313.9 344 47.1
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 2.2e-82 310.5 431 45.2
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.1e-78 298.1 226 65.9
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.5e-75 287.7 491 37.1
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 8.2e-69 265.4 448 37.9
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 7.7e-67 258.8 352 42.6
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.3e-62 243.4 377 40.8
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.5e-58 228.8 224 54.0
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.6e-54 217.2 296 40.9
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.7e-53 214.5 181 62.4
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.1e-52 209.9 223 52.5
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 1.5e-49 201.4 172 61.6
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 5.5e-49 199.5 160 63.8
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 5.5e-49 199.5 160 63.8
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 5.9e-43 179.5 423 29.8
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.6e-40 171.4 141 60.3
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.5e-38 164.9 183 50.8
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 7.0e-36 156.0 156 54.5
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 5.9e-35 152.9 104 72.1
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.3e-34 151.8 142 54.9
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.4e-28 131.0 116 57.8
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 1.4e-23 115.2 451 24.4
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 6.0e-19 99.8 105 47.6
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 1.9e-17 94.7 105 47.6
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 8.9e-15 85.9 67 61.2
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.8e-14 83.2 52 69.2
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 7.5e-14 82.8 52 69.2
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 8.3e-13 79.3 90 50.0


User provided reference genes

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