Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 1.1e-190 669.8 338 100.0
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.3e-172 609.8 338 91.4
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 1.1e-126 457.2 334 67.7
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.5e-123 446.8 334 68.0
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 4.7e-114 415.2 329 62.6
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.8e-113 413.3 333 64.6
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 2.6e-112 409.5 337 62.6
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 8.3e-111 404.4 332 61.4
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 8.3e-111 404.4 332 60.5
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 3.2e-110 402.5 335 62.4
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 2.0e-109 399.8 334 61.1
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 1.0e-108 397.5 334 61.7
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.3e-108 396.4 336 63.1
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 3.9e-108 395.6 322 64.3
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.3e-107 392.5 335 60.9
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 4.3e-107 392.1 334 59.3
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 7.3e-107 391.3 334 60.5
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 7.3e-107 391.3 333 59.8
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 3.6e-106 389.0 334 59.0
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 6.2e-106 388.3 334 59.9
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 6.8e-105 384.8 334 60.8
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.7e-103 380.2 335 59.1
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 1.7e-103 380.2 335 60.0
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 3.7e-103 379.0 334 60.8
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.7e-103 379.0 335 59.1
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 3.7e-103 379.0 350 57.7
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 1.9e-102 376.7 334 58.7
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.4e-102 376.3 330 59.1
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 2.4e-102 376.3 334 58.7
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 3.2e-102 375.9 379 52.8
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 3.2e-102 375.9 334 60.2
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 7.8e-101 371.3 332 58.1
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.3e-100 369.8 335 58.8
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 5.1e-100 368.6 356 57.0
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 8.6e-100 367.9 330 59.4
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 8.6e-100 367.9 334 57.8
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 1.5e-99 367.1 332 58.1
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 3.3e-99 365.9 335 58.8
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 2.1e-98 363.2 332 58.7
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 3.6e-98 362.5 334 58.4
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 1.8e-97 360.1 333 59.8
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.3e-97 359.8 339 56.9
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 5.2e-97 358.6 328 56.1
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.6e-96 356.3 336 56.5
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 1.3e-95 354.0 335 57.6
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 6.4e-95 351.7 336 56.2
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 1.4e-94 350.5 343 55.1
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 3.5e-93 345.9 328 55.2
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 3.5e-93 345.9 356 54.2
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 1.1e-91 340.9 317 55.8
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 3.3e-91 339.3 328 54.3
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 5.6e-91 338.6 339 52.8
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.1e-90 334.7 331 53.5
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.1e-89 334.3 331 53.2
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 4.0e-89 332.4 331 52.9
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 8.9e-89 331.3 367 52.6
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 1.2e-88 330.9 331 53.5
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 1.2e-88 330.9 333 52.9
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 9.9e-88 327.8 348 52.3
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.9e-87 326.2 346 51.2
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 4.9e-87 325.5 339 51.9
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.1e-86 324.3 331 52.6
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.1e-86 324.3 335 52.5
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 1.9e-86 323.6 336 52.1
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 9.3e-86 321.2 335 53.7
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 3.9e-84 315.8 277 60.6
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 9.6e-83 311.2 332 51.2
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 4.8e-82 308.9 335 51.6
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 1.8e-81 307.0 335 51.6
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 4.0e-81 305.8 260 59.2
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 2.6e-80 303.1 344 49.7
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 2.9e-79 299.7 353 48.7
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 8.4e-79 298.1 292 56.5
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.0e-76 291.2 292 54.8
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 1.0e-76 291.2 317 49.2
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 1.1e-75 287.7 330 50.6
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 1.9e-75 287.0 352 47.4
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 4.3e-75 285.8 336 47.0
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 9.6e-75 284.6 346 47.7
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 3.7e-74 282.7 352 46.9
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 6.9e-73 278.5 309 48.9
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 1.2e-72 277.7 331 50.2
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 2.0e-72 276.9 333 48.3
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 2.0e-72 276.9 333 48.3
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 2.0e-72 276.9 332 49.4
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 1.1e-70 271.2 333 47.7
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 1.4e-70 270.8 329 47.7
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 3.2e-70 269.6 328 46.3
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 2.1e-69 266.9 329 46.5
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 2.7e-69 266.5 203 64.5
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 3.5e-69 266.2 354 45.2
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 6.0e-69 265.4 282 52.5
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 1.5e-67 260.8 333 46.8
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 5.6e-67 258.8 333 47.7
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 1.3e-66 257.7 358 44.4
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 2.8e-66 256.5 340 45.9
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 8.4e-63 245.0 258 50.8
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 1.2e-61 241.1 217 56.7
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 2.7e-61 240.0 283 47.3
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 5.1e-60 235.7 270 47.0
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 1.8e-57 227.3 272 46.7
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 2.4e-57 226.9 249 50.6
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 3.1e-57 226.5 304 45.4
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.0e-55 221.5 213 55.4
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 3.8e-55 219.5 273 45.8
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 5.5e-54 215.7 234 50.9
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 7.9e-53 211.8 199 58.3
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.5e-51 206.8 208 51.4
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.2e-47 193.7 196 51.5
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 3.3e-43 179.9 198 48.5
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.7e-42 176.4 234 43.6
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 1.1e-41 174.9 207 45.4
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 5.3e-41 172.6 233 42.5
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 2.6e-40 170.2 204 46.1
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.5e-39 165.2 236 41.9
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 9.4e-38 161.8 150 53.3
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.7e-37 160.2 233 41.2
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 3.0e-36 156.8 136 60.3
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.1e-33 146.7 141 53.9
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.2e-32 144.8 202 39.1
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 1.3e-31 141.4 126 54.0
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 7.5e-27 125.6 180 43.9
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.7e-18 97.8 84 60.7
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 1.7e-18 97.8 86 62.8
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 6.1e-13 79.3 211 30.8
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 4.9e-10 69.7 175 32.6
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 5.6e-06 56.2 131 33.6


User provided reference genes

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