Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0122300 Salix brachista HOM05D001816 ORTHO05D349438 7.5e-106 387.1 184 100.0
Potri.009G141300 Populus trichocarpa HOM05D001816 ORTHO05D002001 2.4e-19 99.8 377 27.1
Sabra09G0109800 Salix brachista HOM05D001816 ORTHO05D002001 2.4e-19 99.8 371 27.5
Lj9C403T6 Lonicera japonica HOM05D001816 ORTHO05D002001 1.5e-18 97.1 343 26.2
MD05G1130000 Malus domestica HOM05D001816 ORTHO05D002001 2.0e-18 96.7 223 32.3
Manes.04G068300 Manihot esculenta HOM05D001816 ORTHO05D002001 2.0e-18 96.7 379 26.4
MD10G1133000 Malus domestica HOM05D001816 ORTHO05D002001 4.5e-18 95.5 380 26.1
Prupe.8G174300 Prunus persica HOM05D001816 ORTHO05D002001 5.0e-17 92.0 380 24.5
FAN20G1974 Fragaria x ananassa HOM05D001816 ORTHO05D002001 6.5e-17 91.7 380 25.0
SalBow1G5513 Salvia bowleyana HOM05D001816 ORTHO05D002001 6.5e-17 91.7 354 25.7
Atru.chr5.3488 Acer truncatum HOM05D001816 ORTHO05D002001 2.5e-16 89.7 380 25.5
Actinidia20551 Actinidia chinensis HOM05D001816 ORTHO05D002001 2.5e-16 89.7 380 24.5
Dinv41898 Davidia involucrata HOM05D001816 ORTHO05D002001 2.5e-16 89.7 372 25.5
FAN27G0881 Fragaria x ananassa HOM05D001816 ORTHO05D002001 4.2e-16 89.0 380 24.5
GSVIVG01023918001 Vitis vinifera HOM05D001816 ORTHO05D002001 4.2e-16 89.0 426 23.5
FvH4_2g16070 Fragaria vesca HOM05D001816 ORTHO05D002001 5.5e-16 88.6 380 24.2
FAN24G0316 Fragaria x ananassa HOM05D001816 ORTHO05D002001 5.5e-16 88.6 380 24.2
RcHm_v2.0_Chr6g0279751 Rosa chinensis HOM05D001816 ORTHO05D002001 9.4e-16 87.8 374 24.9
TAR628G0285 Trochodendron aralioides HOM05D001816 ORTHO05D002001 9.4e-16 87.8 380 25.0
VMungo1309G1075 Vigna mungo HOM05D001816 ORTHO05D002001 1.6e-15 87.0 380 23.9
Cfa005345 Carpinus fangiana HOM05D001816 ORTHO05D002001 2.1e-15 86.7 380 24.5
Haze_02022 Corylus avellana HOM05D001816 ORTHO05D002001 2.1e-15 86.7 380 24.5
Lj1g0012910 Lotus japonicus HOM05D001816 ORTHO05D002001 2.7e-15 86.3 380 23.4
CANSAT25G0387 Cannabis sativa HOM05D001816 ORTHO05D002001 3.6e-15 85.9 380 25.3
Phvul.009G116900 Phaseolus vulgaris HOM05D001816 ORTHO05D002001 3.6e-15 85.9 380 23.9
FAN15G3397 Fragaria x ananassa HOM05D001816 ORTHO05D002001 6.1e-15 85.1 380 23.9
Phvul.007G142900 Phaseolus vulgaris HOM05D001816 ORTHO05D002001 6.1e-15 85.1 380 23.7
QL11p055386 Quercus lobata HOM05D001816 ORTHO05D002001 7.9e-15 84.7 374 24.6
Nitab4.5_0003603g0030 Nicotiana tabacum HOM05D001816 ORTHO05D002001 1.0e-14 84.3 347 24.8
Lalb_Chr08g0246781 Lupinus albus HOM05D001816 ORTHO05D002001 1.4e-14 84.0 380 23.2
QL11p055697 Quercus lobata HOM05D001816 ORTHO05D002001 1.4e-14 84.0 374 24.6
TPR.G38581 Trifolium pratense HOM05D001816 ORTHO05D002001 1.4e-14 84.0 380 23.4
Ah.01g023480 Amaranthus hybridus HOM05D001816 ORTHO05D002001 1.8e-14 83.6 240 28.8
MELO3C013645.2 Cucumis melo HOM05D001816 ORTHO05D002001 1.8e-14 83.6 426 22.5
CsaV3_6G012710 Cucumis sativus L. HOM05D001816 ORTHO05D002001 1.8e-14 83.6 426 22.8
Glyma.06G001100 Glycine max HOM05D001816 ORTHO05D002001 1.8e-14 83.6 380 23.7
Oeu051849.1 Olea europaea HOM05D001816 ORTHO05D002001 1.8e-14 83.6 380 24.5
Thecc.02G050000 Theobroma cacao HOM05D001816 ORTHO05D002001 1.8e-14 83.6 380 23.9
Nn6g31779 Nelumbo nucifera HOM05D001816 ORTHO05D002001 2.3e-14 83.2 176 32.4
CSS0006826 Camellia sinensis var. sinensis HOM05D001816 ORTHO05D002001 3.0e-14 82.8 371 24.8
Medtr3g118360 Medicago truncatula HOM05D001816 ORTHO05D002001 3.0e-14 82.8 194 30.9
CiPaw.05G091200 Carya illinoinensis HOM05D001816 ORTHO05D002001 5.1e-14 82.0 380 23.7
Glyma.04G001600 Glycine max HOM05D001816 ORTHO05D002001 5.1e-14 82.0 194 30.9
AUR62030935 Chenopodium quinoa HOM05D001816 ORTHO05D002001 6.7e-14 81.6 192 33.3
Ciclev10030103m.g Citrus clementina HOM05D001816 ORTHO05D002001 6.7e-14 81.6 374 24.1
vmacro17274 Vaccinium macrocarpon HOM05D001816 ORTHO05D002001 6.7e-14 81.6 380 24.7
arahy.Tifrunner.gnm1.ann1.1BU1FJ Arachis hypogaea HOM05D001816 ORTHO05D002001 8.8e-14 81.3 380 23.2
PGR142G1779 Punica granatum HOM05D001816 ORTHO05D002001 1.1e-13 80.9 372 24.2
Psat5g000880 Pisum sativum HOM05D001816 ORTHO05D002001 1.5e-13 80.5 194 30.4
SGA_v2.0_scaffold32G13329 Striga asiatica HOM05D001816 ORTHO05D002001 1.5e-13 80.5 377 23.9
Peaxi162Scf00362g00360 Petunia axillaris HOM05D001816 ORTHO05D002001 2.0e-13 80.1 240 28.3
Aqoxy6G01808 Aquilegia oxysepala HOM05D001816 ORTHO05D002001 2.6e-13 79.7 380 23.9
Lsat_1_v5_gn_8_121800 Lactuca sativa HOM05D001816 ORTHO05D002001 3.3e-13 79.3 240 26.7
arahy.Tifrunner.gnm1.ann1.X97WXI Arachis hypogaea HOM05D001816 ORTHO05D002001 4.4e-13 79.0 380 22.9
AUR62012953 Chenopodium quinoa HOM05D001816 ORTHO05D002001 4.4e-13 79.0 380 23.7
Cc09_g10520 Coffea canephora HOM05D001816 ORTHO05D002001 7.4e-13 78.2 372 23.9
COL.COLO4_17969 Corchorus olitorius HOM05D001816 ORTHO05D002001 7.4e-13 78.2 380 23.9
Migut.B00031 Erythranthe guttata HOM05D001816 ORTHO05D002001 7.4e-13 78.2 192 30.2
Eucgr.I01492 Eucalyptus grandis HOM05D001816 ORTHO05D002001 7.4e-13 78.2 372 24.5
Rhsim05G0050000 Rhododendron simsii HOM05D001816 ORTHO05D002001 7.4e-13 78.2 374 23.8
EL10Ac9g21289 Beta vulgaris HOM05D001816 ORTHO05D002001 9.7e-13 77.8 240 27.9
Sed0019949 Sechium edule HOM05D001816 ORTHO05D002001 9.7e-13 77.8 240 27.1
ClCG02G010990 Citrullus lanatus HOM05D001816 ORTHO05D002001 1.3e-12 77.4 380 22.9
PSO170G2372 Papaver somniferum HOM05D001816 ORTHO05D002001 1.3e-12 77.4 188 30.3
AUR62009961 Chenopodium quinoa HOM05D001816 ORTHO05D002001 1.7e-12 77.0 194 29.9
unitig_21.g20851 Utricularia gibba HOM05D001816 ORTHO05D002001 1.7e-12 77.0 218 30.3
Zm00001eb371640 Zea mays HOM05D001816 ORTHO05D002001 1.7e-12 77.0 238 26.9
Nitab4.5_0002486g0050 Nicotiana tabacum HOM05D001816 ORTHO05D002001 2.8e-12 76.3 372 23.4
Sc12g0007070 Simmondsia chinensis HOM05D001816 ORTHO05D002001 2.8e-12 76.3 380 23.7
Duzib132G0368 Durio zibethinus HOM05D001816 ORTHO05D002001 3.7e-12 75.9 380 23.4
HanXRQChr17g0559451 Helianthus annuus HOM05D001816 ORTHO05D002001 3.7e-12 75.9 241 26.6
Solyc01g111990.3 Solanum lycopersicum HOM05D001816 ORTHO05D002001 8.2e-12 74.7 374 23.8
Sopen01g054040 Solanum pennellii HOM05D001816 ORTHO05D002001 8.2e-12 74.7 374 23.8
DCAR_022835 Daucus carota HOM05D001816 ORTHO05D002001 1.1e-11 74.3 192 28.1
Gohir.D02G229700 Gossypium hirsutum HOM05D001816 ORTHO05D002001 1.1e-11 74.3 374 23.5
Gorai.005G257400 Gossypium raimondii HOM05D001816 ORTHO05D002001 1.1e-11 74.3 374 23.5
Gohir.A03G208200 Gossypium hirsutum HOM05D001816 ORTHO05D002001 1.4e-11 73.9 374 23.5
CBR_g32429 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-11 73.6 158 32.3
Pp3c2_4380 Physcomitrium patens HOM05D001816 ORTHO05D002001 3.1e-11 72.8 192 28.1
TWI31G0479 Tripterygium wilfordii HOM05D001816 ORTHO05D002001 3.1e-11 72.8 235 29.4
CAN.G1235.26 Capsicum annuum HOM05D001816 ORTHO05D002001 9.1e-11 71.2 188 29.8
ECA233G4820 Erigeron canadensis HOM05D001816 ORTHO05D002001 1.3e-09 67.4 194 27.3
AT5G22800 Arabidopsis thaliana HOM05D001816 ORTHO05D002001 2.2e-09 66.6 71 52.1
BcaB05g22693 Brassica carinata HOM05D001816 ORTHO05D002001 5.0e-09 65.5 69 50.7
CAN.G1224.1 Capsicum annuum HOM05D001816 ORTHO05D002001 5.0e-09 65.5 219 27.4
vmacro17275 Vaccinium macrocarpon HOM05D001816 ORTHO05D002001 6.5e-09 65.1 235 28.1
CARHR190770 Cardamine hirsuta HOM05D001816 ORTHO05D002001 8.5e-09 64.7 52 59.6
Ca_15279_v3 Cicer arietinum L. HOM05D001816 ORTHO05D002001 1.1e-08 64.3 37 70.3
ATR0712G016 Amborella trichopoda HOM05D001816 ORTHO05D002001 1.9e-08 63.5 47 68.1
BcaC03g13917 Brassica carinata HOM05D001816 ORTHO05D002001 1.9e-08 63.5 69 47.8
C02p11280 Brassica napus HOM05D001816 ORTHO05D002001 1.9e-08 63.5 69 47.8
RcHm_v2.0_Chr6g0279761 Rosa chinensis HOM05D001816 ORTHO05D002001 1.9e-08 63.5 38 68.4
SMO234G0071 Selaginella moellendorffii HOM05D001816 ORTHO05D002001 1.9e-08 63.5 255 24.3
CDE05G1766 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 4.2e-08 62.4 47 63.8
AL6G33900 Arabidopsis lyrata HOM05D001816 ORTHO05D002001 5.5e-08 62.0 52 57.7
Cpa.g.sc20.161 Carica papaya HOM05D001816 ORTHO05D002001 5.5e-08 62.0 43 60.5
Sp6g22620 Schrenkiella parvula HOM05D001816 ORTHO05D002001 5.5e-08 62.0 52 57.7
BNapus_Darmor_BZH_scaffold_38p00390 Brassica napus HOM05D001816 ORTHO05D002001 7.2e-08 61.6 52 55.8
BolC2t07196H Brassica oleracea HOM05D001816 ORTHO05D002001 7.2e-08 61.6 52 55.8
BraA02t05688Z Brassica rapa HOM05D001816 ORTHO05D002001 7.2e-08 61.6 52 55.8
CDE05G0454 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 7.2e-08 61.6 47 63.8
Carub.0006s2052 Capsella rubella HOM05D001816 ORTHO05D002001 9.4e-08 61.2 52 55.8
Os06g0245800 Oryza sativa ssp. japonica HOM05D001816 ORTHO05D002001 1.2e-07 60.8 38 65.8
SEGI_06689 Sequoiadendron giganteum HOM05D001816 ORTHO05D002001 1.2e-07 60.8 47 66.0
Thhalv10012575m.g Eutrema salsugineum HOM05D001816 ORTHO05D002001 2.1e-07 60.1 71 43.7
FvH4_2g16080 Fragaria vesca HOM05D001816 ORTHO05D002001 2.7e-07 59.7 34 70.6
FAN24G3079 Fragaria x ananassa HOM05D001816 ORTHO05D002001 2.7e-07 59.7 34 70.6
Mapoly0065s0015 Marchantia polymorpha HOM05D001816 ORTHO05D002001 2.7e-07 59.7 47 63.8
THA.LOC104807386 Tarenaya hassleriana HOM05D001816 ORTHO05D002001 3.6e-07 59.3 52 55.8
Aa31LG2G15270 Aethionema arabicum HOM05D001816 ORTHO05D002001 4.7e-07 58.9 52 53.8
AagrBONN_evm.TU.Sc2ySwM_368.2591 Anthoceros agrestis HOM05D001816 ORTHO05D002001 4.7e-07 58.9 47 61.7
MD10G1133100 Malus domestica HOM05D001816 ORTHO05D002001 1.8e-06 57.0 38 57.9
ECA238G3345 Erigeron canadensis HOM05D001816 ORTHO05D002001 5.2e-06 55.5 40 55.0


User provided reference genes

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